Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 8.0e-277 956.4 475 100.0
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 7.4e-190 667.5 407 80.3
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.7e-181 639.8 408 77.2
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.0e-178 630.6 405 76.3
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 3.2e-177 625.5 406 76.8
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 3.2e-177 625.5 405 76.0
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 9.4e-177 624.0 375 80.5
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 9.4e-177 624.0 377 79.8
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.6e-176 623.2 412 74.8
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 3.6e-176 622.1 406 75.4
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 6.1e-176 621.3 381 79.0
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.0e-175 620.5 413 75.1
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.8e-175 619.8 380 79.5
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 6.7e-175 617.8 407 74.2
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.5e-174 616.7 406 74.6
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.6e-174 615.9 385 78.7
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 3.3e-174 615.5 408 75.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 4.4e-174 615.1 408 75.2
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 5.7e-174 614.8 406 75.1
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 7.4e-174 614.4 344 85.5
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.7e-173 613.2 365 81.1
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.7e-173 613.2 406 74.6
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 3.7e-173 612.1 405 74.3
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 3.7e-173 612.1 380 78.7
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 4.8e-173 611.7 430 71.4
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 8.2e-173 610.9 410 74.6
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 8.2e-173 610.9 386 76.2
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 8.2e-173 610.9 380 79.2
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 8.2e-173 610.9 412 74.0
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.4e-172 610.1 405 73.8
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.8e-172 609.8 375 78.9
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 2.4e-172 609.4 412 72.3
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 2.4e-172 609.4 344 84.6
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.4e-172 609.4 380 78.9
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 2.4e-172 609.4 372 79.6
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 2.4e-172 609.4 344 85.2
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 3.1e-172 609.0 405 73.6
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 4.1e-172 608.6 386 77.7
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 5.3e-172 608.2 376 78.2
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 5.3e-172 608.2 369 78.9
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 7.0e-172 607.8 350 81.4
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.6e-171 606.7 361 80.9
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 3.5e-171 605.5 406 73.2
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 4.5e-171 605.1 377 77.2
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 7.7e-171 604.4 347 83.9
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 8.5e-170 600.9 349 81.7
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.9e-169 599.7 373 77.7
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.9e-169 599.7 350 80.0
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.9e-169 599.7 350 82.9
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 2.5e-169 599.4 335 83.6
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.5e-169 599.4 346 82.1
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.2e-169 599.0 376 76.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 4.2e-169 598.6 354 81.1
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.5e-169 598.2 343 83.1
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 7.2e-169 597.8 344 82.8
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 9.4e-169 597.4 381 76.4
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.2e-168 597.0 344 82.8
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.2e-168 597.0 344 83.4
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.2e-168 597.0 380 75.5
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.6e-168 596.7 344 83.1
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 2.1e-168 596.3 335 83.0
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 2.1e-168 596.3 344 82.3
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 6.1e-168 594.7 351 81.8
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.1e-168 594.7 344 82.8
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 8.0e-168 594.3 380 76.1
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.8e-167 593.2 375 77.3
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 2.3e-167 592.8 336 83.0
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 3.0e-167 592.4 349 80.5
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 5.2e-167 591.7 350 81.7
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.7e-167 591.3 344 82.6
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 6.7e-167 591.3 356 79.5
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 8.8e-167 590.9 376 76.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.6e-166 589.3 390 73.8
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 5.7e-166 588.2 385 75.3
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 9.7e-166 587.4 385 74.8
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.3e-165 587.0 381 75.3
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.7e-165 586.6 409 71.6
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.4e-164 583.6 380 75.3
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 2.4e-164 582.8 344 81.1
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 3.1e-164 582.4 392 73.7
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 5.3e-164 581.6 393 72.5
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 7.0e-164 581.3 382 74.3
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 9.1e-164 580.9 372 75.5
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 2.0e-163 579.7 405 69.9
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 7.7e-163 577.8 353 77.9
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 8.5e-162 574.3 403 71.2
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.1e-161 573.9 327 82.9
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 3.2e-161 572.4 332 80.7
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 4.2e-161 572.0 355 77.2
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 2.7e-160 569.3 351 78.3
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 2.7e-160 569.3 344 79.4
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 3.6e-160 568.9 332 80.1
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.8e-159 564.7 332 79.2
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 5.7e-158 561.6 319 83.7
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 5.4e-156 555.1 348 76.7
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 4.5e-155 552.0 344 75.6
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.6e-152 543.5 312 81.7
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.6e-152 543.5 312 81.7
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 5.4e-148 528.5 354 72.9
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 4.5e-147 525.4 331 75.2
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 2.3e-146 523.1 383 68.1
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.9e-145 520.0 330 73.6
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 4.3e-145 518.8 359 69.4
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.4e-140 503.8 385 67.0
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 6.2e-136 488.4 333 68.2
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.7e-130 470.3 376 64.1
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 3.3e-129 466.1 364 65.9
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.2e-128 464.2 406 61.1
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 5.2e-127 458.8 298 75.5
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 7.8e-123 444.9 329 64.4
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 3.2e-116 422.9 376 57.4
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.2e-112 411.0 274 73.7
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.2e-110 404.4 328 58.5
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 4.4e-110 402.5 251 76.9
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.3e-109 401.0 237 81.0
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 3.9e-106 389.4 236 77.1
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 6.6e-106 388.7 327 59.6
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.9e-97 360.5 369 50.1
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.7e-69 267.7 287 47.0
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 7.9e-67 258.8 181 70.2
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 3.4e-62 243.4 165 70.9
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 2.2e-61 240.7 168 67.3
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 5.7e-49 199.5 176 59.7
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 6.3e-48 196.1 131 73.3
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 1.1e-15 89.0 160 37.5
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.1e-15 87.0 88 52.3
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.1e-15 87.0 88 52.3
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.3e-08 65.5 35 77.1


User provided reference genes

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