Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g33883_MAGBIO Magnolia biondii HOM05D004949 ORTHO05D006006 5.2e-111 404.4 212 100.0
TAR375G0033 Trochodendron aralioides HOM05D004949 ORTHO05D006006 1.6e-64 250.0 211 65.4
PSO782G4101 Papaver somniferum HOM05D004949 ORTHO05D006006 2.6e-62 242.7 211 63.0
ATR0665G211 Amborella trichopoda HOM05D004949 ORTHO05D006006 1.7e-61 240.0 204 65.7
PSO063G1669 Papaver somniferum HOM05D004949 ORTHO05D006006 1.1e-60 237.3 211 61.6
Nn1g00131 Nelumbo nucifera HOM05D004949 ORTHO05D006006 1.9e-60 236.5 211 64.0
Aqoxy3G01363 Aquilegia oxysepala HOM05D004949 ORTHO05D006006 4.6e-59 231.9 211 60.2
Aqoxy3G00659 Aquilegia oxysepala HOM05D004949 ORTHO05D006006 1.0e-58 230.7 211 60.2
Eucgr.E00272 Eucalyptus grandis HOM05D004949 ORTHO05D006006 3.9e-58 228.8 214 60.7
GSVIVG01013143001 Vitis vinifera HOM05D004949 ORTHO05D006006 3.9e-58 228.8 211 61.1
Dinv28969 Davidia involucrata HOM05D004949 ORTHO05D006006 2.2e-56 223.0 211 57.8
Hma1.2p1_0120F.1_g057130 Hydrangea macrophylla HOM05D004949 ORTHO05D006006 3.4e-54 215.7 203 57.6
Prupe.5G033200 Prunus persica HOM05D004949 ORTHO05D006006 3.4e-54 215.7 210 59.0
Rhsim11G0048300 Rhododendron simsii HOM05D004949 ORTHO05D006006 7.7e-54 214.5 211 57.8
CANSAT21G1226 Cannabis sativa HOM05D004949 ORTHO05D006006 1.9e-52 209.9 203 61.6
Actinidia25973 Actinidia chinensis HOM05D004949 ORTHO05D006006 4.2e-52 208.8 211 56.9
CsaV3_3G001560 Cucumis sativus L. HOM05D004949 ORTHO05D006006 7.2e-52 208.0 207 57.0
Zm00001eb018410 Zea mays HOM05D004949 ORTHO05D006006 3.6e-51 205.7 206 54.4
Os03g0378200 Oryza sativa ssp. japonica HOM05D004949 ORTHO05D006006 7.9e-51 204.5 206 56.8
Glyma.08G270900 Glycine max HOM05D004949 ORTHO05D006006 3.0e-50 202.6 210 56.2
RcHm_v2.0_Chr7g0210111 Rosa chinensis HOM05D004949 ORTHO05D006006 3.0e-50 202.6 209 55.5
QL12p004876 Quercus lobata HOM05D004949 ORTHO05D006006 5.1e-50 201.8 212 54.2
Potri.003G093300 Populus trichocarpa HOM05D004949 ORTHO05D006006 2.5e-49 199.5 205 57.1
Cfa012457 Carpinus fangiana HOM05D004949 ORTHO05D006006 3.3e-49 199.1 211 55.9
COL.COLO4_17003 Corchorus olitorius HOM05D004949 ORTHO05D006006 1.3e-48 197.2 210 54.8
Haze_08210 Corylus avellana HOM05D004949 ORTHO05D006006 1.7e-48 196.8 211 56.4
Phvul.003G284400 Phaseolus vulgaris HOM05D004949 ORTHO05D006006 2.8e-48 196.1 210 53.8
Sc01g0007370 Simmondsia chinensis HOM05D004949 ORTHO05D006006 3.7e-48 195.7 211 54.5
TWI15G0747 Tripterygium wilfordii HOM05D004949 ORTHO05D006006 4.8e-48 195.3 202 56.4
arahy.Tifrunner.gnm1.ann1.78T75P Arachis hypogaea HOM05D004949 ORTHO05D006006 4.1e-47 192.2 211 54.0
arahy.Tifrunner.gnm1.ann1.M3M86A Arachis hypogaea HOM05D004949 ORTHO05D006006 4.1e-47 192.2 211 54.0
HanXRQChr02g0049971 Helianthus annuus HOM05D004949 ORTHO05D006006 5.3e-47 191.8 212 53.8
BraA03t11719Z Brassica rapa HOM05D004949 ORTHO05D006006 6.9e-47 191.4 202 53.5
VMungo1309G0709 Vigna mungo HOM05D004949 ORTHO05D006006 6.9e-47 191.4 210 53.8
Duzib068G0117 Durio zibethinus HOM05D004949 ORTHO05D006006 9.1e-47 191.0 206 56.3
CARHR224640 Cardamine hirsuta HOM05D004949 ORTHO05D006006 2.0e-46 189.9 217 52.5
Lj4g0000928 Lotus japonicus HOM05D004949 ORTHO05D006006 2.0e-46 189.9 210 52.4
AL7G36600 Arabidopsis lyrata HOM05D004949 ORTHO05D006006 2.6e-46 189.5 219 52.1
Sed0027872 Sechium edule HOM05D004949 ORTHO05D006006 3.4e-46 189.1 207 53.1
Aa31LG6G660 Aethionema arabicum HOM05D004949 ORTHO05D006006 5.9e-46 188.3 206 52.9
A03p25190 Brassica napus HOM05D004949 ORTHO05D006006 5.9e-46 188.3 202 54.5
Carub.0007s2343 Capsella rubella HOM05D004949 ORTHO05D006006 1.0e-45 187.6 213 54.0
Thhalv10001430m.g Eutrema salsugineum HOM05D004949 ORTHO05D006006 1.7e-45 186.8 207 53.1
Manes.17G017708 Manihot esculenta HOM05D004949 ORTHO05D006006 2.2e-45 186.4 209 55.0
Oeu048371.1 Olea europaea HOM05D004949 ORTHO05D006006 2.2e-45 186.4 211 52.6
BcaC01g05139 Brassica carinata HOM05D004949 ORTHO05D006006 2.9e-45 186.0 207 52.2
C03p30030 Brassica napus HOM05D004949 ORTHO05D006006 2.9e-45 186.0 207 52.2
BolC3t15350H Brassica oleracea HOM05D004949 ORTHO05D006006 2.9e-45 186.0 207 52.2
CSS0006782 Camellia sinensis var. sinensis HOM05D004949 ORTHO05D006006 3.8e-45 185.7 195 54.9
FvH4_5g22370 Fragaria vesca HOM05D004949 ORTHO05D006006 3.8e-45 185.7 209 52.2
Lalb_Chr05g0228811 Lupinus albus HOM05D004949 ORTHO05D006006 5.0e-45 185.3 200 53.5
CSS0020726 Camellia sinensis var. sinensis HOM05D004949 ORTHO05D006006 6.5e-45 184.9 195 54.9
SalBow8G0555 Salvia bowleyana HOM05D004949 ORTHO05D006006 6.5e-45 184.9 204 53.9
FAN18G3647 Fragaria x ananassa HOM05D004949 ORTHO05D006006 8.5e-45 184.5 209 51.7
BcaB01g03270 Brassica carinata HOM05D004949 ORTHO05D006006 1.9e-44 183.3 208 52.4
FAN13G2248 Fragaria x ananassa HOM05D004949 ORTHO05D006006 1.9e-44 183.3 209 51.2
ECA233G0790 Erigeron canadensis HOM05D004949 ORTHO05D006006 9.4e-44 181.0 204 51.5
CiPaw.12G064900 Carya illinoinensis HOM05D004949 ORTHO05D006006 1.6e-43 180.3 211 50.2
SEGI_29978 Sequoiadendron giganteum HOM05D004949 ORTHO05D006006 1.6e-43 180.3 204 53.4
vmacro00318 Vaccinium macrocarpon HOM05D004949 ORTHO05D006006 2.7e-43 179.5 223 50.7
MELO3C013842.2 Cucumis melo HOM05D004949 ORTHO05D006006 3.6e-43 179.1 210 51.0
Lsat_1_v5_gn_6_4100 Lactuca sativa HOM05D004949 ORTHO05D006006 4.7e-43 178.7 211 49.3
VMungo0251G0718 Vigna mungo HOM05D004949 ORTHO05D006006 1.8e-42 176.8 194 53.6
PGR042G3443 Punica granatum HOM05D004949 ORTHO05D006006 3.9e-42 175.6 209 51.2
Atru.chr6.1656 Acer truncatum HOM05D004949 ORTHO05D006006 8.8e-42 174.5 211 52.1
CAN.G298.24 Capsicum annuum HOM05D004949 ORTHO05D006006 8.8e-42 174.5 213 49.3
Sopen08g025330 Solanum pennellii HOM05D004949 ORTHO05D006006 1.5e-41 173.7 210 50.0
Gorai.003G183400 Gossypium raimondii HOM05D004949 ORTHO05D006006 2.6e-41 172.9 210 48.6
Solyc08g076810.4 Solanum lycopersicum HOM05D004949 ORTHO05D006006 4.4e-41 172.2 210 49.5
Cc08_g02960 Coffea canephora HOM05D004949 ORTHO05D006006 7.4e-41 171.4 209 50.2
MD06G1036200 Malus domestica HOM05D004949 ORTHO05D006006 9.7e-41 171.0 185 51.9
Gohir.D03G172700 Gossypium hirsutum HOM05D004949 ORTHO05D006006 1.3e-40 170.6 210 47.6
Gohir.A03G000052 Gossypium hirsutum HOM05D004949 ORTHO05D006006 2.2e-40 169.9 210 47.6
SalBow6G3319 Salvia bowleyana HOM05D004949 ORTHO05D006006 1.1e-39 167.5 204 50.5
FAN18G2708 Fragaria x ananassa HOM05D004949 ORTHO05D006006 1.4e-39 167.2 200 50.5
Gohir.A09G031300 Gossypium hirsutum HOM05D004949 ORTHO05D006006 1.8e-39 166.8 207 47.8
Ciclev10031452m.g Citrus clementina HOM05D004949 ORTHO05D006006 1.2e-38 164.1 206 48.5
Medtr8g066760 Medicago truncatula HOM05D004949 ORTHO05D006006 1.6e-38 163.7 210 48.6
DCAR_028920 Daucus carota HOM05D004949 ORTHO05D006006 7.2e-36 154.8 189 49.2
Zm00001eb392220 Zea mays HOM05D004949 ORTHO05D006006 3.6e-35 152.5 133 60.2
Pp3c15_10960 Physcomitrium patens HOM05D004949 ORTHO05D006006 4.4e-33 145.6 199 45.7
Migut.O00927 Erythranthe guttata HOM05D004949 ORTHO05D006006 2.2e-32 143.3 191 50.3
Mapoly0029s0019 Marchantia polymorpha HOM05D004949 ORTHO05D006006 2.8e-32 142.9 216 46.8
SMO351G0610 Selaginella moellendorffii HOM05D004949 ORTHO05D006006 2.8e-32 142.9 202 47.5
EL10Ac5g12089 Beta vulgaris HOM05D004949 ORTHO05D006006 8.2e-32 141.4 203 41.9
Peaxi162Scf00236g00034 Petunia axillaris HOM05D004949 ORTHO05D006006 2.4e-31 139.8 152 53.9
Sp4g27350 Schrenkiella parvula HOM05D004949 ORTHO05D006006 3.1e-31 139.4 151 53.0
Sabra03G0062700 Salix brachista HOM05D004949 ORTHO05D006006 5.3e-31 138.7 153 53.6
DCAR_008253 Daucus carota HOM05D004949 ORTHO05D006006 7.0e-31 138.3 145 53.1
AT4G17910 Arabidopsis thaliana HOM05D004949 ORTHO05D006006 5.9e-30 135.2 172 48.8
Ca_14051_v3 Cicer arietinum L. HOM05D004949 ORTHO05D006006 1.3e-29 134.0 157 47.8
Thecc.03G225400 Theobroma cacao HOM05D004949 ORTHO05D006006 2.2e-29 133.3 210 44.8
Nitab4.5_0005651g0010 Nicotiana tabacum HOM05D004949 ORTHO05D006006 1.1e-28 131.0 150 50.0
Nitab4.5_0002773g0060 Nicotiana tabacum HOM05D004949 ORTHO05D006006 2.5e-28 129.8 197 42.6
Nitab4.5_0000711g0040 Nicotiana tabacum HOM05D004949 ORTHO05D006006 3.2e-28 129.4 151 50.3
AUR62018700 Chenopodium quinoa HOM05D004949 ORTHO05D006006 5.5e-28 128.6 203 42.9
THA.LOC104812834 Tarenaya hassleriana HOM05D004949 ORTHO05D006006 5.5e-28 128.6 136 52.9
FAN04G2495 Fragaria x ananassa HOM05D004949 ORTHO05D006006 1.4e-26 124.0 180 45.0
SGA_v2.0_scaffold38G15014 Striga asiatica HOM05D004949 ORTHO05D006006 2.0e-25 120.2 183 42.6
HPP92_016910 Vanilla planifolia HOM05D004949 ORTHO05D006006 2.0e-22 110.2 109 58.7
Nitab4.5_0003568g0040 Nicotiana tabacum HOM05D004949 ORTHO05D006006 3.5e-22 109.4 78 69.2
Psat4g121520 Pisum sativum HOM05D004949 ORTHO05D006006 3.5e-22 109.4 118 52.5
Migut.L01002 Erythranthe guttata HOM05D004949 ORTHO05D006006 1.1e-20 104.4 69 75.4
unitig_0.g2339 Utricularia gibba HOM05D004949 ORTHO05D006006 3.2e-20 102.8 156 46.2
Aa31LG2G21460 Aethionema arabicum HOM05D004949 ORTHO05D006006 5.5e-20 102.1 61 77.0
CDE06G2155 Ceratophyllum demersum HOM05D004949 ORTHO05D006006 9.4e-20 101.3 188 40.4
TPR.G3338 Trifolium pratense HOM05D004949 ORTHO05D006006 1.2e-19 100.9 153 43.8
AagrBONN_evm.TU.Sc2ySwM_368.549 Anthoceros agrestis HOM05D004949 ORTHO05D006006 6.1e-19 98.6 200 37.0
ClCG10G001480 Citrullus lanatus HOM05D004949 ORTHO05D006006 1.4e-18 97.4 110 50.9
Gohir.A06G130506 Gossypium hirsutum HOM05D004949 ORTHO05D006006 6.8e-18 95.1 95 54.7
Psat7g200760 Pisum sativum HOM05D004949 ORTHO05D006006 1.2e-17 94.4 123 45.5
Hund11225 Selenicereus undatus HOM05D004949 ORTHO05D006006 1.5e-17 94.0 54 81.5
MSTRG.7638 Avicennia marina HOM05D004949 ORTHO05D006006 2.0e-17 93.6 56 78.6
Lj8A304G48 Lonicera japonica HOM05D004949 ORTHO05D006006 7.5e-17 91.7 55 72.7
SHI07305 Sapria himalayana HOM05D004949 ORTHO05D006006 1.1e-15 87.8 68 67.6
CBR_g46224 Chara braunii HOM05D004949 ORTHO05D006006 1.4e-15 87.4 134 39.6
Lj8A304G49 Lonicera japonica HOM05D004949 ORTHO05D006006 1.6e-14 84.0 84 54.8
MD00G1071700 Malus domestica HOM05D004949 ORTHO05D006006 1.6e-14 84.0 83 57.8
Cre13.g587200 Chlamydomonas reinhardtii HOM05D004949 ORTHO05D006006 2.1e-11 73.6 198 31.8
TPR.G40857 Trifolium pratense HOM05D004949 ORTHO05D006006 2.8e-11 73.2 85 49.4
PSO541G1551 Papaver somniferum HOM05D004949 ORTHO05D009901 4.7e-11 72.4 55 61.8
Cfa022893 Carpinus fangiana HOM05D004949 ORTHO05D006006 1.0e-10 71.2 193 29.0
PRCOL_00001577 Prasinoderma coloniale HOM05D004949 ORTHO05D006006 1.2e-06 57.8 58 44.8


User provided reference genes

Program Settings