Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 2.7e-233 811.6 397 100.0
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.1e-149 533.9 395 66.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 2.0e-143 513.1 393 64.4
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 3.1e-133 479.2 386 62.7
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.3e-128 463.0 388 60.1
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 8.8e-128 461.1 390 60.5
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.3e-120 436.4 393 54.5
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 2.3e-120 436.4 395 54.7
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 6.8e-120 434.9 401 54.6
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 5.7e-119 431.8 407 54.1
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 7.5e-119 431.4 390 56.2
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.3e-118 430.6 395 55.7
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.4e-117 427.2 400 55.5
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 5.0e-115 418.7 398 55.5
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 1.1e-114 417.5 390 51.3
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 2.7e-113 412.9 400 50.8
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.4e-112 410.6 391 53.7
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 6.8e-112 408.3 409 53.1
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 8.8e-112 407.9 392 53.6
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 1.5e-111 407.1 395 51.6
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 2.0e-111 406.8 388 53.9
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 7.5e-111 404.8 389 54.5
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 6.3e-110 401.7 397 50.4
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 8.3e-110 401.4 397 53.9
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 1.1e-109 401.0 388 51.0
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 1.4e-109 400.6 386 52.3
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 4.5e-108 395.6 391 51.4
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 4.5e-108 395.6 395 52.9
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 2.3e-107 393.3 408 50.2
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 6.6e-107 391.7 390 50.3
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.5e-106 390.6 393 49.9
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 4.2e-106 389.0 393 50.9
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 1.6e-105 387.1 385 49.6
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.1e-105 386.7 319 59.9
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 2.1e-105 386.7 390 51.8
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 8.0e-105 384.8 399 50.6
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.0e-103 380.2 319 58.9
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 2.8e-102 376.3 398 49.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 4.9e-102 375.6 384 50.5
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 3.2e-101 372.9 388 49.0
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 9.2e-101 371.3 384 50.0
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.6e-100 370.5 384 50.0
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 7.8e-100 368.2 395 49.1
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.7e-99 367.1 395 48.9
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 4.3e-98 362.5 362 50.3
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 3.6e-97 359.4 362 52.2
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 3.1e-96 356.3 325 54.5
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.4e-95 352.8 319 56.7
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 7.5e-95 351.7 402 45.3
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.2e-94 350.1 402 45.0
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 9.2e-93 344.7 395 46.1
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 8.0e-89 331.6 392 43.9
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 4.0e-88 329.3 391 43.7
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 2.6e-87 326.6 391 43.2
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 9.8e-87 324.7 391 43.0
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 9.8e-87 324.7 393 43.3
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.2e-86 323.6 321 50.8
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 4.9e-86 322.4 391 42.7
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 4.9e-86 322.4 391 42.7
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 2.4e-85 320.1 393 42.7
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.3e-83 313.5 383 42.3
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.8e-80 303.9 300 51.0
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.5e-79 300.8 314 53.2
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 4.9e-78 295.8 364 42.0
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 8.3e-78 295.0 362 42.5
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 7.1e-77 292.0 365 42.5
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.5e-76 289.7 388 42.5
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 4.6e-76 289.3 399 39.8
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 5.6e-74 282.3 346 43.6
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 7.4e-50 202.2 205 51.7
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 6.2e-41 172.6 238 37.8
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 1.0e-22 112.1 126 42.1
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 1.8e-08 64.7 371 22.4
MELO3C005495.2 Cucumis melo HOM05D000664 ORTHO05D000491 1.0e-06 58.9 210 29.0
SMO145G0192 Selaginella moellendorffii HOM05D003005 ORTHO05D375330 5.0e-06 56.6 191 29.8


User provided reference genes

Program Settings