Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.1e-209 733.0 362 100.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 8.3e-117 424.5 336 67.6
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.2e-115 420.6 294 73.1
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.1e-113 414.1 335 64.5
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.5e-113 412.9 303 69.3
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.5e-113 412.9 326 66.0
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 5.6e-113 411.8 331 65.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 9.5e-113 411.0 325 65.8
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.2e-112 410.6 324 66.4
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 2.8e-112 409.5 350 64.3
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 6.2e-112 408.3 336 65.2
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.4e-111 407.1 340 62.9
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.1e-111 406.0 301 69.8
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 3.1e-111 406.0 334 64.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 1.5e-110 403.7 329 65.3
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.0e-110 403.3 340 62.9
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.6e-110 402.9 326 64.1
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.4e-110 402.5 322 65.5
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 5.8e-110 401.7 302 69.2
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 7.5e-110 401.4 340 62.6
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 7.5e-110 401.4 339 64.0
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 9.9e-110 401.0 339 61.9
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.7e-109 400.2 320 64.1
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 2.2e-109 399.8 320 64.1
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.7e-109 399.1 325 64.3
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 4.9e-109 398.7 309 65.7
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.4e-108 397.1 316 65.8
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.2e-108 396.0 329 63.8
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 3.2e-108 396.0 340 60.6
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 3.2e-108 396.0 340 61.8
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 7.1e-108 394.8 337 62.3
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 9.2e-108 394.4 309 65.0
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 9.2e-108 394.4 328 64.0
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.2e-107 394.0 345 59.4
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-107 393.7 310 65.8
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.1e-107 393.3 331 63.1
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 3.5e-107 392.5 272 73.2
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 6.0e-107 391.7 326 63.5
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 7.8e-107 391.3 337 60.8
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 7.8e-107 391.3 323 65.0
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.8e-107 391.3 337 62.3
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.3e-106 390.6 260 75.0
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.3e-106 390.6 335 62.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.3e-106 390.6 306 64.4
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.3e-106 390.6 360 60.3
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.3e-106 390.6 320 64.1
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.7e-106 390.2 336 62.2
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.3e-106 389.8 299 67.6
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 2.3e-106 389.8 299 67.6
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.0e-106 389.4 337 60.5
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.0e-106 389.4 333 61.6
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 3.0e-106 389.4 330 63.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.0e-106 389.4 337 60.2
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 6.6e-106 388.3 320 64.1
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.6e-106 387.9 340 62.1
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 8.6e-106 387.9 338 62.4
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 8.6e-106 387.9 331 61.9
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.1e-105 387.5 331 61.0
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.1e-105 387.5 333 61.9
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.9e-105 386.7 268 72.4
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 2.5e-105 386.3 331 62.2
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 3.3e-105 386.0 245 76.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 5.6e-105 385.2 322 64.0
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 5.6e-105 385.2 332 62.7
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 9.5e-105 384.4 375 57.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-104 384.0 260 75.4
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.6e-104 383.6 322 63.0
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.6e-104 383.6 239 78.2
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.6e-104 382.5 330 62.4
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.6e-104 382.5 344 59.3
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 6.2e-104 381.7 318 63.8
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.1e-104 381.3 374 57.0
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.4e-103 380.6 325 62.5
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.8e-103 380.2 362 58.0
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 4.0e-103 379.0 320 62.8
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.0e-103 379.0 363 58.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 5.2e-103 378.6 335 60.9
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 5.2e-103 378.6 260 73.1
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.5e-102 377.1 293 67.9
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.0e-102 376.7 331 59.5
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.6e-102 376.3 300 64.7
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.6e-102 376.3 332 61.1
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 4.4e-102 375.6 337 61.4
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 5.8e-102 375.2 322 62.4
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.3e-101 374.0 317 59.9
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.7e-101 373.6 268 72.0
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.4e-100 370.5 285 69.1
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 3.2e-100 369.4 238 76.9
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 3.2e-100 369.4 375 53.3
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 4.1e-100 369.0 322 62.4
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 7.8e-99 364.8 343 58.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 7.8e-99 364.8 343 58.9
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 8.6e-98 361.3 302 63.6
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.1e-97 360.9 343 58.6
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 3.3e-97 359.4 239 74.9
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 9.6e-97 357.8 274 69.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 3.1e-95 352.8 292 63.0
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 7.6e-94 348.2 261 69.3
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.2e-93 346.7 267 66.7
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.4e-92 344.0 232 75.9
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 5.1e-90 335.5 268 66.0
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 5.1e-90 335.5 306 58.2
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.1e-89 334.3 304 58.9
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.3e-88 330.9 209 78.0
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 4.9e-85 318.9 298 53.0
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.1e-83 313.5 291 57.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.5e-81 306.6 326 50.6
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.4e-78 296.2 314 49.0
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 8.4e-77 291.6 211 67.3
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 5.5e-76 288.9 245 62.4
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.5e-73 280.8 299 49.5
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 3.7e-72 276.2 264 58.0
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 4.0e-71 272.7 228 62.3
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.4e-70 269.6 185 73.0
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.0e-69 268.1 225 60.9
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.2e-67 261.2 301 46.2
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.1e-51 207.2 361 38.5
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.0e-45 188.3 129 75.2
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.4e-44 184.5 143 67.1
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 8.0e-43 178.7 123 74.8
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 7.4e-41 172.2 154 59.7
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.9e-36 157.5 234 39.3
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.7e-32 143.3 97 72.2
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 3.1e-31 140.2 84 75.0
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 5.9e-30 136.0 221 38.0
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.5e-20 104.0 82 61.0
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 3.3e-12 77.0 77 54.5


User provided reference genes

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