Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 6.6e-137 490.7 251 100.0
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 1.8e-73 280.0 242 62.0
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.3e-71 273.9 254 59.1
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.8e-70 270.0 253 56.9
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.5e-69 266.9 247 58.3
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 3.4e-69 265.8 247 57.9
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 2.2e-68 263.1 248 59.3
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.6e-66 256.9 250 56.8
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 7.9e-66 254.6 248 54.0
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 3.9e-65 252.3 294 51.4
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.6e-63 246.9 238 54.2
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.4e-62 243.8 247 55.1
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 9.0e-62 241.1 258 54.3
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.6e-61 239.6 255 53.3
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.5e-61 238.8 235 52.8
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 5.9e-61 238.4 252 54.4
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 5.9e-61 238.4 243 53.1
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 3.8e-60 235.7 238 54.6
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 6.5e-60 235.0 238 52.9
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.9e-59 233.4 222 56.3
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.9e-59 233.4 242 52.5
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 2.5e-59 233.0 210 55.7
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 4.2e-59 232.3 198 57.1
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 4.2e-59 232.3 240 53.3
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 9.4e-59 231.1 248 54.0
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 9.4e-59 231.1 257 52.1
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.2e-58 230.7 258 53.1
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.6e-58 229.2 247 52.2
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 3.6e-58 229.2 248 51.6
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 6.1e-58 228.4 207 58.5
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 7.9e-58 228.0 210 55.7
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.4e-57 227.3 247 51.0
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.8e-57 226.9 252 52.4
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 3.9e-57 225.7 246 52.4
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 6.7e-57 224.9 248 50.0
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.1e-56 224.2 242 51.2
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 2.5e-56 223.0 245 52.2
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.5e-56 223.0 234 50.9
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 5.7e-56 221.9 210 53.3
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.4e-54 217.2 212 53.8
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.4e-54 217.2 256 48.4
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.8e-54 216.9 250 49.2
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 2.4e-54 216.5 211 53.6
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 2.4e-54 216.5 257 49.8
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.1e-54 216.1 276 45.7
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 4.1e-54 215.7 211 53.6
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 4.1e-54 215.7 256 48.8
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 5.3e-54 215.3 207 56.0
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 5.3e-54 215.3 253 49.0
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 9.1e-54 214.5 207 54.6
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 9.1e-54 214.5 205 56.6
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.2e-53 214.2 241 49.0
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 3.4e-53 212.6 216 51.4
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 4.5e-53 212.2 210 52.4
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 7.7e-53 211.5 251 51.0
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 2.2e-52 209.9 248 50.0
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 2.2e-52 209.9 254 51.6
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.9e-52 209.5 254 51.6
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 3.8e-52 209.1 178 59.6
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 6.5e-52 208.4 260 48.1
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.1e-51 207.6 217 53.5
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.4e-51 207.2 290 45.2
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.2e-51 205.7 238 48.7
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 4.2e-51 205.7 198 56.6
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 9.4e-51 204.5 208 55.8
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 2.1e-50 203.4 245 49.8
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.7e-50 203.0 259 47.5
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 7.9e-50 201.4 263 47.1
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 2.3e-49 199.9 263 47.1
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 5.1e-49 198.7 256 47.7
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.5e-48 197.2 185 54.6
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.0e-48 196.8 219 49.8
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 4.4e-48 195.7 256 46.5
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.7e-48 195.3 242 47.9
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 7.4e-48 194.9 221 48.9
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 6.3e-47 191.8 180 54.4
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.4e-46 190.7 235 46.0
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.4e-46 189.9 210 49.5
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.4e-46 189.9 162 58.6
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 5.3e-46 188.7 251 45.0
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.0e-45 186.8 188 52.1
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 2.6e-45 186.4 167 58.7
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.5e-45 186.0 131 64.9
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 4.5e-45 185.7 168 55.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 4.5e-45 185.7 168 55.4
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 5.9e-45 185.3 223 48.0
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 7.7e-45 184.9 166 55.4
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.7e-44 183.7 213 49.3
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.7e-44 183.7 194 53.6
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 2.2e-44 183.3 133 64.7
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 2.9e-44 183.0 165 58.2
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 3.8e-44 182.6 253 45.8
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.0e-44 182.2 217 49.3
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 8.5e-44 181.4 174 54.6
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 1.1e-43 181.0 170 56.5
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.5e-43 180.6 245 45.7
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 2.5e-43 179.9 161 57.8
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.2e-43 179.5 220 47.3
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 5.5e-43 178.7 216 49.1
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 5.5e-43 178.7 163 55.2
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 7.2e-43 178.3 145 58.6
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 9.4e-43 177.9 177 54.8
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 2.1e-42 176.8 247 44.9
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 2.7e-42 176.4 248 44.4
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 1.8e-41 173.7 194 47.9
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 6.7e-41 171.8 207 46.9
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 7.0e-38 161.8 127 60.6
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.7e-37 159.8 241 42.7
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 1.9e-35 153.7 249 39.8
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 3.2e-35 152.9 160 51.9
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 9.4e-35 151.4 122 55.7
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 3.6e-34 149.4 115 58.3
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 4.7e-34 149.1 142 54.9
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.2e-32 144.4 160 48.1
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 2.0e-32 143.7 154 50.0
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 9.8e-32 141.4 111 63.1
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.3e-31 141.0 167 49.1
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 3.1e-30 136.3 152 47.4
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 4.7e-26 122.5 85 64.7
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 8.0e-26 121.7 86 69.8
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 2.3e-25 120.2 209 39.2
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 7.3e-19 98.6 112 48.2
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 3.5e-13 79.7 115 43.5
TPR.G22067 Trifolium pratense HOM05D007016 ORTHO05D008847 4.9e-07 59.3 57 50.9
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 1.4e-06 57.8 63 50.8
TAR622G0501 Trochodendron aralioides HOM05D007016 ORTHO05D008847 3.2e-06 56.6 48 54.2


User provided reference genes

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