Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 1.8e-136 489.2 241 100.0
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.8e-83 313.2 225 68.0
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.7e-79 299.3 245 63.7
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.5e-74 283.5 223 64.1
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 9.9e-74 280.8 229 61.1
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 4.9e-73 278.5 222 59.9
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 7.1e-72 274.6 246 59.8
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.2e-71 273.9 197 67.0
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 1.3e-70 270.4 194 66.0
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.3e-70 270.4 227 60.8
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.9e-70 268.9 224 56.7
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 6.6e-70 268.1 201 66.7
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.1e-69 267.3 266 54.5
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 3.3e-69 265.8 212 62.7
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.3e-69 265.8 226 59.3
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.3e-69 265.8 241 56.8
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 4.3e-69 265.4 228 58.8
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 5.6e-69 265.0 194 67.5
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 7.3e-69 264.6 219 60.7
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 7.3e-69 264.6 229 59.0
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.3e-68 263.8 242 57.0
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.3e-68 263.8 204 64.2
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.1e-68 263.1 201 65.2
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.1e-68 263.1 198 65.7
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.8e-68 262.7 221 60.2
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 2.8e-68 262.7 231 56.7
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 2.8e-68 262.7 174 72.4
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.8e-68 262.7 225 59.6
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 3.6e-68 262.3 232 59.5
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 3.6e-68 262.3 168 73.2
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 3.6e-68 262.3 217 61.3
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 6.2e-68 261.5 220 59.5
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 6.2e-68 261.5 227 59.5
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 1.8e-67 260.0 256 55.1
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 4.0e-67 258.8 218 56.9
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 2.0e-66 256.5 237 57.4
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.0e-66 256.5 249 54.6
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 2.6e-66 256.1 234 53.4
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.6e-66 256.1 190 65.3
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 3.4e-66 255.8 246 55.3
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 4.4e-66 255.4 161 74.5
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 4.4e-66 255.4 166 72.3
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.2e-65 253.1 196 63.3
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.2e-65 253.1 229 56.3
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 2.2e-65 253.1 174 70.1
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 2.2e-65 253.1 193 62.7
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 2.2e-65 253.1 210 59.5
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.9e-65 252.7 221 55.7
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.1e-64 250.8 233 54.9
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.1e-64 250.8 207 60.9
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.9e-64 250.0 208 58.2
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 2.4e-64 249.6 196 61.7
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.4e-64 249.6 164 71.3
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 3.2e-64 249.2 189 59.8
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 3.2e-64 249.2 194 61.3
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 4.2e-64 248.8 195 61.0
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 5.4e-64 248.4 193 59.1
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 9.3e-64 247.7 180 67.8
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.6e-63 246.9 218 57.3
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.6e-63 246.9 238 54.6
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 1.6e-63 246.9 174 66.7
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.5e-63 245.7 174 65.5
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 3.5e-63 245.7 195 63.1
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.0e-63 245.0 288 48.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 6.0e-63 245.0 192 59.9
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 3.0e-62 242.7 196 61.2
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 3.0e-62 242.7 197 60.9
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 8.7e-62 241.1 197 60.4
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 8.7e-62 241.1 167 65.9
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.1e-61 240.7 231 53.7
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 1.5e-61 240.4 258 48.8
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.5e-61 240.4 221 55.2
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 2.5e-61 239.6 233 53.2
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 2.5e-61 239.6 199 57.3
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.5e-61 239.6 196 57.1
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 4.3e-61 238.8 219 58.0
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 5.6e-61 238.4 219 58.0
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 9.6e-61 237.7 219 57.5
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.3e-60 237.3 228 54.4
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.3e-60 237.3 170 65.9
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 2.1e-60 236.5 184 60.3
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.8e-60 236.1 196 57.1
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 3.6e-60 235.7 199 58.3
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 6.2e-60 235.0 172 63.4
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 8.1e-60 234.6 160 70.0
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.4e-59 233.8 184 63.0
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 3.1e-59 232.6 222 53.6
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 5.3e-59 231.9 181 61.9
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 5.3e-59 231.9 195 60.0
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 9.0e-59 231.1 196 60.2
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 1.5e-58 230.3 182 61.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.4e-58 229.2 232 52.6
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 4.5e-58 228.8 191 58.6
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 5.8e-58 228.4 207 59.9
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 5.6e-53 211.8 193 53.9
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 3.4e-50 202.6 120 80.0
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.0e-49 201.1 297 41.4
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.3e-49 200.7 215 50.7
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.9e-45 186.8 169 49.7
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 6.3e-44 181.8 194 46.9
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 7.9e-39 164.9 134 62.7
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.8e-38 163.7 174 44.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 5.9e-34 148.7 146 52.1
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 3.8e-33 146.0 161 39.8
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.0e-30 137.9 159 42.8
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.8e-22 110.5 66 69.7
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.7e-22 108.6 112 53.6
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.7e-20 102.8 87 62.1
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 2.0e-18 97.1 232 32.3
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 2.5e-16 90.1 163 30.7
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 9.4e-16 88.2 163 31.3
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-15 86.7 77 58.4
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 3.8e-09 66.2 104 36.5
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.4e-06 57.8 37 64.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.8e-06 57.4 32 71.9
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 2.3e-06 57.0 45 53.3


User provided reference genes

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