Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 6.4e-260 900.2 448 100.0
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.1e-134 484.2 560 49.3
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 5.1e-116 422.2 572 46.0
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 2.6e-112 409.8 557 45.1
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.6e-109 400.6 485 47.0
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.0e-108 397.9 548 44.0
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 1.9e-107 393.7 549 43.7
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.9e-107 393.7 567 42.0
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 4.3e-107 392.5 545 42.6
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 6.3e-106 388.7 564 41.5
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 6.3e-106 388.7 563 42.5
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 6.9e-105 385.2 421 49.2
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 6.9e-105 385.2 501 45.1
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 5.9e-104 382.1 422 48.6
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.7e-103 380.6 540 41.9
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.2e-103 380.2 510 45.3
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 2.2e-103 380.2 477 45.9
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 8.5e-103 378.3 558 42.3
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 3.2e-102 376.3 494 43.9
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 3.2e-102 376.3 570 40.9
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 4.2e-102 375.9 543 41.8
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.4e-100 370.9 571 41.0
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 1.8e-100 370.5 540 40.6
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 3.0e-100 369.8 432 44.9
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 3.0e-100 369.8 548 41.1
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 6.7e-100 368.6 519 42.4
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 8.8e-100 368.2 515 41.2
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 1.1e-99 367.9 561 40.3
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 4.3e-99 365.9 540 40.4
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 7.4e-99 365.2 423 47.5
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 7.4e-99 365.2 534 40.8
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 9.7e-99 364.8 477 43.6
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 4.8e-98 362.5 536 40.7
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.4e-97 360.1 480 43.1
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.2e-96 357.8 540 40.0
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 1.5e-96 357.5 440 45.2
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 4.5e-96 355.9 541 40.5
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.5e-94 350.1 546 39.4
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 4.2e-94 349.4 489 41.5
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 2.1e-93 347.1 406 44.3
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 1.0e-92 344.7 398 45.0
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 3.9e-92 342.8 563 37.7
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 5.1e-92 342.4 475 40.4
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 2.0e-91 340.5 558 37.3
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 2.6e-91 340.1 543 39.0
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 4.8e-90 335.9 514 37.9
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 6.3e-90 335.5 539 39.0
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.1e-89 334.7 569 36.0
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 1.1e-89 334.7 504 37.3
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.1e-89 334.7 432 44.7
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 3.1e-89 333.2 554 36.8
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 4.1e-89 332.8 504 37.1
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 5.3e-89 332.4 524 39.7
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.5e-88 330.9 442 42.5
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.5e-88 330.9 478 38.7
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 3.5e-88 329.7 432 42.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 5.9e-88 328.9 421 43.7
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 1.0e-87 328.2 513 37.6
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.7e-87 327.4 418 43.8
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 3.8e-87 326.2 543 35.7
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 3.8e-87 326.2 525 36.4
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 5.0e-87 325.9 539 38.0
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 4.2e-86 322.8 499 39.7
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 9.4e-86 321.6 480 38.5
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 3.6e-85 319.7 486 38.7
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 1.0e-84 318.2 528 37.9
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.4e-84 317.8 481 39.9
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 1.5e-83 314.3 516 37.4
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 2.8e-82 310.1 498 39.4
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 8.2e-82 308.5 492 37.2
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 2.4e-81 307.0 518 37.3
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 7.0e-81 305.4 503 37.0
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 5.9e-80 302.4 492 37.0
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 2.9e-79 300.1 453 43.5
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 5.0e-79 299.3 426 42.5
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 8.5e-79 298.5 495 36.4
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.1e-78 298.1 437 39.8
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.5e-78 297.7 380 43.9
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 1.9e-78 297.4 495 36.2
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 5.5e-78 295.8 493 37.9
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 7.2e-78 295.4 511 35.6
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.1e-77 293.9 368 43.8
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 1.3e-74 284.6 601 32.3
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.7e-74 284.3 511 38.4
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 2.9e-71 273.5 434 36.4
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 1.5e-70 271.2 360 41.1
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.3e-66 258.1 274 51.1
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.1e-65 255.0 167 70.1
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 5.9e-64 249.2 385 36.6
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 5.0e-63 246.1 489 31.3
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 6.8e-60 235.7 422 32.9
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 4.5e-56 223.0 425 31.3
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 2.8e-53 213.8 184 56.0
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.7e-50 204.5 297 40.7
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 4.9e-50 203.0 250 47.2
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 1.3e-47 194.9 198 49.5
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 2.5e-46 190.7 294 38.4
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 2.5e-46 190.7 252 44.0
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 3.4e-43 180.3 268 40.7
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.7e-42 177.9 125 66.4
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 6.0e-40 169.5 167 52.1
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.5e-38 164.9 167 51.5
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 3.3e-38 163.7 142 54.9
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.1e-36 158.7 182 51.6
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.8e-36 157.9 277 34.3
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.0e-36 156.8 182 51.1
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 2.4e-33 147.5 358 27.7
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 7.1e-33 146.0 358 27.7
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 3.5e-32 143.7 130 59.2
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 5.8e-27 126.3 133 45.9
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.9e-25 121.3 197 32.0
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 4.2e-25 120.2 225 34.2
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 3.4e-19 100.5 168 31.5
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 1.2e-16 92.0 95 48.4
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 1.7e-15 88.2 226 32.7
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 3.3e-14 84.0 70 54.3
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-11 75.5 63 57.1
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 5.4e-09 66.6 168 25.6
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 9.3e-09 65.9 41 70.7
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 8.7e-07 59.3 224 23.7


User provided reference genes

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