Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 3.0e-252 874.8 473 100.0
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 2.6e-166 589.3 440 67.5
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 3.7e-157 558.9 441 61.9
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 1.7e-146 523.5 446 59.2
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 6.5e-146 521.5 446 59.2
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 4.4e-142 508.8 356 68.8
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 1.4e-140 503.8 444 58.6
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.1e-136 490.0 440 58.0
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 2.8e-136 489.6 435 55.2
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 3.6e-136 489.2 439 55.8
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 8.9e-135 484.6 438 57.3
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 2.6e-134 483.0 445 56.0
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 2.2e-133 479.9 440 57.3
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 2.8e-133 479.6 438 58.7
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 4.9e-133 478.8 444 56.3
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 1.4e-132 477.2 444 54.5
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 1.4e-132 477.2 438 57.5
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 4.1e-132 475.7 428 58.6
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 9.2e-132 474.6 438 56.4
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 2.0e-131 473.4 422 57.8
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 1.3e-130 470.7 440 56.1
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 1.9e-129 466.8 438 56.2
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.8e-128 463.0 440 53.4
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 2.8e-128 463.0 438 54.3
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 3.0e-127 459.5 447 55.9
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 4.0e-127 459.1 440 56.8
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 4.0e-127 459.1 425 57.4
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 8.9e-127 458.0 428 55.6
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 1.2e-126 457.6 437 53.1
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 1.2e-126 457.6 432 53.9
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.2e-126 457.6 430 55.1
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 2.6e-126 456.4 432 56.0
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.4e-126 455.7 403 54.8
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 3.7e-125 452.6 428 53.0
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 6.4e-125 451.8 425 57.2
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 8.3e-125 451.4 441 53.7
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.2e-123 447.6 440 54.5
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 1.6e-123 447.2 391 55.0
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 1.6e-123 447.2 428 53.3
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 1.6e-123 447.2 444 53.2
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 2.7e-123 446.4 431 53.4
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 4.6e-123 445.7 435 53.3
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 4.6e-123 445.7 435 53.3
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 2.3e-122 443.4 442 51.6
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 2.3e-122 443.4 442 51.6
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 5.0e-122 442.2 425 53.2
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.5e-121 440.7 390 54.4
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 4.3e-121 439.1 438 52.3
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 5.6e-121 438.7 427 53.6
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 1.2e-120 437.6 448 53.6
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.2e-120 437.6 391 54.7
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 1.1e-119 434.5 442 50.5
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 1.4e-119 434.1 422 52.8
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 1.8e-119 433.7 435 52.2
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 3.1e-119 433.0 427 52.2
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 6.8e-119 431.8 442 50.2
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 6.8e-119 431.8 442 50.2
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 6.8e-119 431.8 389 55.0
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 8.9e-119 431.4 438 51.6
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 1.2e-118 431.0 440 52.3
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 4.4e-118 429.1 442 50.7
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 4.4e-118 429.1 442 51.1
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 3.7e-117 426.0 432 51.2
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 8.3e-117 424.9 361 57.1
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 1.1e-116 424.5 440 51.1
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 1.2e-115 421.0 422 51.2
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 2.1e-115 420.2 433 50.6
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 2.1e-115 420.2 406 52.5
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 3.5e-115 419.5 442 50.0
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 6.0e-115 418.7 356 58.7
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 2.3e-114 416.8 417 54.7
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 8.6e-114 414.8 354 61.0
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 1.1e-113 414.5 444 51.6
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 9.5e-113 411.4 429 50.1
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 1.2e-112 411.0 439 49.9
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 2.1e-112 410.2 380 54.2
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 2.0e-110 403.7 396 50.5
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 2.2e-109 400.2 351 56.4
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 4.9e-109 399.1 354 55.9
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 4.9e-109 399.1 354 55.9
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 1.9e-108 397.1 404 50.0
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 3.2e-108 396.4 395 51.4
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 1.7e-106 390.6 424 48.8
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 1.1e-105 387.9 383 51.7
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 1.4e-103 380.9 356 55.1
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 2.6e-102 376.7 344 53.8
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 3.4e-102 376.3 344 55.8
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.4e-100 370.9 348 53.4
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 1.6e-99 367.5 343 54.8
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 2.3e-98 363.6 461 45.3
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 3.1e-95 353.2 331 53.5
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 9.0e-95 351.7 358 49.4
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 1.9e-92 344.0 338 52.1
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 2.7e-83 313.5 271 55.4
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 1.3e-80 304.7 267 58.1
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 1.0e-69 268.5 405 40.5
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 1.3e-66 258.1 450 35.1
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 1.8e-66 257.7 302 50.3
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 5.3e-63 246.1 370 40.0
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 4.6e-59 233.0 440 33.0
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 1.0e-58 231.9 297 48.8
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 7.4e-57 225.7 184 59.2
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 4.1e-47 193.4 384 34.6
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 1.7e-45 188.0 438 32.9
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 3.7e-40 170.2 209 46.9
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 5.5e-36 156.4 237 40.5
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 5.3e-31 139.8 139 51.1
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 1.6e-30 138.3 139 51.1
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 7.7e-30 136.0 128 53.9
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.5e-14 84.0 94 53.2
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 7.8e-14 82.8 94 52.1
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.8e-11 74.3 82 54.9
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 3.1e-10 70.9 83 55.4
TAR362G0529 Trochodendron aralioides HOM05D006774 ORTHO05D008411 5.2e-10 70.1 55 61.8
RhsimUnG0226800 Rhododendron simsii HOM05D006774 ORTHO05D008411 6.8e-10 69.7 90 54.4
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 1.7e-08 65.1 118 38.1
SEGI_31760 Sequoiadendron giganteum HOM05D006774 ORTHO05D008411 1.7e-08 65.1 80 51.2
Nn3g21217 Nelumbo nucifera HOM05D006774 ORTHO05D008411 1.9e-07 61.6 43 69.8
Nitab4.5_0010934g0020 Nicotiana tabacum HOM05D006774 ORTHO05D008411 9.2e-07 59.3 65 41.5
PGR102G1071 Punica granatum HOM05D000363 ORTHO05D000236 3.5e-06 57.4 132 31.8


User provided reference genes

Program Settings