Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 6.1e-110 401.0 223 100.0
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 8.9e-61 237.7 236 64.8
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 4.1e-58 228.8 224 60.7
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.0e-57 226.5 184 70.1
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 2.7e-57 226.1 171 73.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 7.8e-57 224.6 162 75.3
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.0e-56 224.2 235 61.7
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.7e-56 223.4 231 61.5
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.7e-56 223.4 147 81.6
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.7e-56 223.4 231 61.9
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.0e-56 222.6 222 60.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 3.9e-56 222.2 237 61.2
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 5.0e-56 221.9 192 66.1
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 8.6e-56 221.1 161 75.2
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.1e-55 220.7 185 68.6
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.5e-55 220.3 217 62.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.5e-55 220.3 174 71.3
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.3e-55 219.2 227 61.2
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 4.3e-55 218.8 210 61.0
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 5.6e-55 218.4 227 59.9
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 9.5e-55 217.6 214 61.7
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.2e-54 217.2 236 61.4
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.2e-54 217.2 234 59.8
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.6e-54 216.9 171 70.8
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.8e-54 216.1 234 58.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.6e-54 215.7 171 70.8
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 3.6e-54 215.7 187 63.6
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.7e-54 215.3 237 58.6
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.1e-53 214.2 227 59.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-53 213.8 171 73.7
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.8e-53 213.4 232 59.5
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.3e-53 213.0 186 66.7
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.3e-53 213.0 237 57.4
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.1e-53 212.6 171 73.1
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 4.0e-53 212.2 230 59.6
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 5.2e-53 211.8 233 60.1
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 6.8e-53 211.5 239 59.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 6.8e-53 211.5 210 59.0
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 6.8e-53 211.5 223 59.6
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 8.9e-53 211.1 232 58.6
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 8.9e-53 211.1 219 58.4
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 8.9e-53 211.1 238 60.1
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.5e-52 210.3 229 58.1
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.5e-52 210.3 218 60.6
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.0e-52 209.9 235 59.6
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 2.0e-52 209.9 220 60.9
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.6e-52 209.5 206 61.7
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.6e-52 209.5 219 58.0
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.4e-52 209.1 199 59.8
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 3.4e-52 209.1 232 57.8
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.4e-52 209.1 227 58.1
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 3.4e-52 209.1 171 71.3
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.4e-52 209.1 171 71.3
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.4e-52 209.1 233 57.1
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.4e-52 209.1 199 63.8
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 5.8e-52 208.4 235 58.3
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 7.5e-52 208.0 186 65.1
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 7.5e-52 208.0 224 60.7
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 9.8e-52 207.6 228 58.3
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 9.8e-52 207.6 233 57.9
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.3e-51 207.2 236 58.5
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.3e-51 207.2 231 58.4
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 3.7e-51 205.7 238 57.6
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 4.9e-51 205.3 134 82.1
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.9e-51 205.3 236 55.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 8.3e-51 204.5 228 58.3
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 8.3e-51 204.5 199 62.3
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.1e-50 204.1 223 58.7
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.4e-50 203.0 215 59.5
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.1e-50 202.2 224 58.9
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.1e-50 202.2 169 68.0
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 5.4e-50 201.8 254 53.9
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 7.1e-50 201.4 171 68.4
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 9.2e-50 201.1 227 56.4
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 2.1e-49 199.9 225 57.8
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 2.7e-49 199.5 228 57.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.5e-49 199.1 226 55.3
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.5e-49 199.1 228 57.5
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.5e-49 199.1 218 58.3
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 4.6e-49 198.7 216 57.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.6e-49 198.7 203 60.6
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 6.0e-49 198.4 225 57.3
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 6.0e-49 198.4 227 56.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 7.8e-49 198.0 213 58.7
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.3e-48 197.2 168 66.1
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.7e-48 196.8 147 71.4
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.7e-48 196.8 213 60.1
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.9e-48 195.7 221 57.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 6.6e-48 194.9 230 57.0
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.5e-47 193.7 200 59.0
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.3e-47 192.6 216 56.0
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 3.3e-47 192.6 212 55.2
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 4.3e-47 192.2 260 48.8
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 5.6e-47 191.8 231 55.0
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.8e-46 189.5 165 65.5
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 6.2e-46 188.3 232 55.6
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 6.2e-46 188.3 171 62.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 8.1e-46 188.0 230 54.8
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.3e-45 186.4 225 53.8
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 3.1e-45 186.0 187 59.9
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 8.9e-45 184.5 225 53.8
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 8.9e-45 184.5 211 55.0
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.2e-43 179.9 196 57.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.4e-42 176.4 203 53.7
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 4.1e-42 175.6 235 51.1
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.6e-41 173.7 200 59.5
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 6.0e-41 171.8 171 64.9
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.6e-40 168.3 257 47.9
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-36 156.8 140 65.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.3e-35 154.1 128 68.0
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.1e-34 151.0 128 66.4
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 9.3e-34 147.9 162 57.4
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.4e-29 134.0 145 51.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.8e-29 133.7 223 41.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 5.3e-29 132.1 125 59.2
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.2e-28 131.0 132 59.8
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 5.8e-28 128.6 201 50.7
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 4.2e-26 122.5 210 42.4
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.4e-26 122.1 145 50.3
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 5.6e-23 112.1 128 50.0
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 7.6e-20 101.7 75 69.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.1e-18 97.8 120 47.5
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 9.3e-18 94.7 105 50.5
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 7.9e-09 65.1 192 30.2
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.1e-08 62.4 116 44.0
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.3e-06 57.8 66 53.0


User provided reference genes

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