Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g29338_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D024853 2.8e-41 171.4 80 100.0
Cfa008549 Carpinus fangiana HOM05D000590 ORTHO05D005739 2.2e-09 65.5 34 82.4
Hma1.2p1_0412F.1_g147170 Hydrangea macrophylla HOM05D000590 ORTHO05D005739 2.8e-09 65.1 34 88.2
Manes.04G059300 Manihot esculenta HOM05D000590 ORTHO05D005739 2.8e-09 65.1 34 88.2
TAR362G0932 Trochodendron aralioides HOM05D000590 ORTHO05D005739 2.8e-09 65.1 33 84.8
Hund15143 Selenicereus undatus HOM05D000590 ORTHO05D005739 6.3e-09 63.9 33 81.8
ATR0824G108 Amborella trichopoda HOM05D000590 ORTHO05D005739 8.2e-09 63.5 32 81.2
Cpa.g.sc50.130 Carica papaya HOM05D000590 ORTHO05D024853 8.2e-09 63.5 34 82.4
Ciclev10018602m.g Citrus clementina HOM05D000590 ORTHO05D005739 8.2e-09 63.5 34 85.3
Sc07g0007210 Simmondsia chinensis HOM05D000590 ORTHO05D005739 8.2e-09 63.5 32 84.4
Dinv44239 Davidia involucrata HOM05D000590 ORTHO05D005739 1.1e-08 63.2 33 87.9
DCAR_029931 Daucus carota HOM05D000590 ORTHO05D005739 1.4e-08 62.8 32 78.1
Atru.chr3.1727 Acer truncatum HOM05D000590 ORTHO05D005739 2.4e-08 62.0 34 79.4
MD04G1028500 Malus domestica HOM05D000590 ORTHO05D005739 2.4e-08 62.0 34 73.5
Dinv22650 Davidia involucrata HOM05D000590 ORTHO05D005739 3.1e-08 61.6 34 82.4
CiPaw.01G108600 Carya illinoinensis HOM05D000590 ORTHO05D005739 4.1e-08 61.2 34 79.4
Haze_11082 Corylus avellana HOM05D000590 ORTHO05D005739 4.1e-08 61.2 34 79.4
Gohir.A10G136500 Gossypium hirsutum HOM05D000590 ORTHO05D005739 4.1e-08 61.2 32 84.4
Gohir.D10G130300 Gossypium hirsutum HOM05D000590 ORTHO05D005739 4.1e-08 61.2 32 84.4
Gorai.011G144000 Gossypium raimondii HOM05D000590 ORTHO05D005739 4.1e-08 61.2 32 84.4
Potri.014G146300 Populus trichocarpa HOM05D000590 ORTHO05D005739 4.1e-08 61.2 34 79.4
CSS0029067 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D005739 5.3e-08 60.8 32 84.4
MBI11_g00125_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D005739 5.3e-08 60.8 32 78.1
Nitab4.5_0001687g0070 Nicotiana tabacum HOM05D000590 ORTHO05D005739 5.3e-08 60.8 34 79.4
Thecc.04G180700 Theobroma cacao HOM05D000590 ORTHO05D005739 5.3e-08 60.8 32 84.4
vmacro00564 Vaccinium macrocarpon HOM05D000590 ORTHO05D005739 5.3e-08 60.8 32 81.2
CDE08G0067 Ceratophyllum demersum HOM05D000590 ORTHO05D005739 7.0e-08 60.5 32 84.4
Potri.002G232800 Populus trichocarpa HOM05D000590 ORTHO05D005739 7.0e-08 60.5 34 79.4
Sabra02G0177600 Salix brachista HOM05D000590 ORTHO05D005739 7.0e-08 60.5 34 79.4
GSVIVG01013555001 Vitis vinifera HOM05D000590 ORTHO05D005739 9.1e-08 60.1 31 83.9
Actinidia35907 Actinidia chinensis HOM05D000590 ORTHO05D005739 1.2e-07 59.7 31 83.9
PSO017G6033 Papaver somniferum HOM05D000590 ORTHO05D005739 1.2e-07 59.7 32 75.0
PSO675G4267 Papaver somniferum HOM05D000590 ORTHO05D005739 1.2e-07 59.7 32 75.0
Peaxi162Scf00286g00341 Petunia axillaris HOM05D000590 ORTHO05D005739 1.2e-07 59.7 34 76.5
DCAR_023890 Daucus carota HOM05D000590 ORTHO05D005739 1.6e-07 59.3 31 83.9
Eucgr.H00451 Eucalyptus grandis HOM05D000590 ORTHO05D005739 2.0e-07 58.9 32 81.2
MD13G1279000 Malus domestica HOM05D000590 ORTHO05D005739 2.0e-07 58.9 34 70.6
Prupe.1G177800 Prunus persica HOM05D000590 ORTHO05D005739 2.0e-07 58.9 31 80.6
QL10p044299 Quercus lobata HOM05D000590 ORTHO05D005739 2.0e-07 58.9 34 76.5
TWI63G0312 Tripterygium wilfordii HOM05D000590 ORTHO05D005739 2.0e-07 58.9 34 76.5
Solyc09g098260.3 Solanum lycopersicum HOM05D000590 ORTHO05D005739 2.7e-07 58.5 33 78.8
Sopen09g036190 Solanum pennellii HOM05D000590 ORTHO05D005739 2.7e-07 58.5 33 78.8
AL1G15760 Arabidopsis lyrata HOM05D000590 ORTHO05D005739 3.5e-07 58.2 34 79.4
ClCG08G003700 Citrullus lanatus HOM05D000590 ORTHO05D005739 3.5e-07 58.2 32 75.0
Aqoxy2G04044 Aquilegia oxysepala HOM05D000590 ORTHO05D005739 4.5e-07 57.8 32 81.2
BcaC07g42107 Brassica carinata HOM05D000590 ORTHO05D005739 5.9e-07 57.4 34 76.5
A09p67280 Brassica napus HOM05D000590 ORTHO05D005739 5.9e-07 57.4 34 76.5
C08p51570 Brassica napus HOM05D000590 ORTHO05D005739 5.9e-07 57.4 34 76.5
BolC8t52685H Brassica oleracea HOM05D000590 ORTHO05D005739 5.9e-07 57.4 34 76.5
AUR62036478 Chenopodium quinoa HOM05D000590 ORTHO05D005739 5.9e-07 57.4 32 78.1
AUR62037096 Chenopodium quinoa HOM05D000590 ORTHO05D005739 5.9e-07 57.4 32 78.1
Nitab4.5_0001526g0080 Nicotiana tabacum HOM05D000590 ORTHO05D005739 5.9e-07 57.4 33 75.8
Carub.0001s0518 Capsella rubella HOM05D000590 ORTHO05D005739 7.7e-07 57.0 34 76.5
Lsat_1_v5_gn_5_63200 Lactuca sativa HOM05D000590 ORTHO05D005739 7.7e-07 57.0 34 73.5
Lj3C343G2 Lonicera japonica HOM05D000590 ORTHO05D005739 7.7e-07 57.0 34 73.5
RcHm_v2.0_Chr4g0409981 Rosa chinensis HOM05D000590 ORTHO05D005739 7.7e-07 57.0 34 70.6
AT1G05830 Arabidopsis thaliana HOM05D000590 ORTHO05D005739 1.0e-06 56.6 34 76.5
Thhalv10006646m.g Eutrema salsugineum HOM05D000590 ORTHO05D005739 1.0e-06 56.6 34 76.5
Sp1g04640 Schrenkiella parvula HOM05D000590 ORTHO05D005739 1.0e-06 56.6 34 76.5
THA.LOC104800910 Tarenaya hassleriana HOM05D000590 ORTHO05D005739 1.0e-06 56.6 34 73.5
MELO3C026117.2 Cucumis melo HOM05D000590 ORTHO05D005739 1.3e-06 56.2 32 71.9
CsaV3_6G003090 Cucumis sativus L. HOM05D000590 ORTHO05D005739 1.3e-06 56.2 32 71.9
Psat3g189880 Pisum sativum HOM05D000590 ORTHO05D005739 1.3e-06 56.2 34 73.5
Sed0020632 Sechium edule HOM05D000590 ORTHO05D005739 1.3e-06 56.2 32 75.0
Hund10609 Selenicereus undatus HOM05D000590 ORTHO05D005739 1.3e-06 56.2 76 46.1
EL10Ac5g11624 Beta vulgaris HOM05D000590 ORTHO05D005739 1.7e-06 55.8 31 77.4
Cc00_g10020 Coffea canephora HOM05D000590 ORTHO05D005739 2.2e-06 55.5 34 70.6
ECA233G2054 Erigeron canadensis HOM05D000590 ORTHO05D005739 2.9e-06 55.1 34 70.6
Glyma.18G282700 Glycine max HOM05D000590 ORTHO05D005739 2.9e-06 55.1 34 67.6
VMungo1383G1517 Vigna mungo HOM05D000590 ORTHO05D005739 2.9e-06 55.1 34 67.6
Aa31LG5G5330 Aethionema arabicum HOM05D000590 ORTHO05D005739 5.0e-06 54.3 33 66.7
Lalb_Chr04g0258071 Lupinus albus HOM05D000590 ORTHO05D005739 5.0e-06 54.3 34 64.7
TPR.G2958 Trifolium pratense HOM05D000590 ORTHO05D005739 5.0e-06 54.3 34 64.7
MSTRG.21982 Avicennia marina HOM05D000590 ORTHO05D005739 6.5e-06 53.9 32 71.9
Ca_07101_v3 Cicer arietinum L. HOM05D000590 ORTHO05D005739 6.5e-06 53.9 34 67.6
DCAR_029033 Daucus carota HOM05D000590 ORTHO05D006311 6.5e-06 53.9 32 71.9
DCAR_029056 Daucus carota HOM05D000590 ORTHO05D005739 6.5e-06 53.9 32 71.9
Phvul.008G018500 Phaseolus vulgaris HOM05D000590 ORTHO05D005739 6.5e-06 53.9 34 64.7
Lj1g0024416 Lotus japonicus HOM05D000590 ORTHO05D005739 8.5e-06 53.5 34 67.6
Zm00001eb308480 Zea mays HOM05D000590 ORTHO05D005739 8.5e-06 53.5 32 68.8


User provided reference genes

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