Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 1.2e-117 426.4 200 100.0
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 1.6e-90 336.3 201 78.6
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.6e-90 336.3 201 78.6
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.3e-90 334.3 197 78.2
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 5.3e-89 331.3 201 77.1
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 9.0e-89 330.5 195 79.0
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 9.0e-89 330.5 201 78.1
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 2.6e-88 328.9 201 76.1
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 2.6e-88 328.9 196 75.0
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 5.9e-88 327.8 194 76.8
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 2.2e-87 325.9 199 74.4
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 2.9e-87 325.5 200 74.0
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 2.5e-86 322.4 194 75.8
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.2e-86 322.0 219 71.7
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 5.5e-86 321.2 197 74.6
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 9.3e-86 320.5 196 72.4
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 2.7e-85 318.9 197 75.1
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.0e-84 317.0 200 69.0
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 1.0e-84 317.0 198 72.2
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 1.5e-83 313.2 197 72.1
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 1.5e-83 313.2 200 70.0
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.5e-83 313.2 201 69.2
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 5.7e-83 311.2 195 73.8
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 1.6e-82 309.7 197 71.1
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 2.2e-82 309.3 196 69.4
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 2.2e-82 309.3 194 72.7
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.7e-82 308.5 191 73.3
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.7e-82 308.5 191 73.3
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.1e-81 307.0 200 70.0
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.4e-81 306.6 194 68.6
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 1.8e-81 306.2 199 71.9
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 5.3e-81 304.7 197 68.5
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 6.9e-81 304.3 197 69.0
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 6.9e-81 304.3 201 69.2
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 9.1e-81 303.9 196 70.9
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.2e-80 303.5 197 71.6
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.5e-80 303.1 201 70.1
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 2.0e-80 302.8 195 71.8
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 5.9e-80 301.2 197 68.5
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 5.9e-80 301.2 199 71.4
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 1.3e-79 300.1 194 68.0
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.3e-79 300.1 195 71.3
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 1.3e-79 300.1 195 71.3
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 2.2e-79 299.3 201 68.2
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 2.9e-79 298.9 199 69.3
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 5.0e-79 298.1 197 67.0
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 5.0e-79 298.1 197 67.0
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 5.0e-79 298.1 199 68.8
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 8.5e-79 297.4 200 67.0
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.9e-78 296.2 192 68.8
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 2.5e-78 295.8 197 67.5
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 2.5e-78 295.8 195 67.7
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 5.5e-78 294.7 192 69.3
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 1.6e-77 293.1 200 67.0
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 2.7e-77 292.4 200 67.0
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 3.6e-77 292.0 195 68.7
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 3.6e-77 292.0 169 78.7
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 6.1e-77 291.2 197 65.0
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.0e-76 290.4 192 68.2
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 3.0e-76 288.9 197 64.5
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 3.0e-76 288.9 199 67.3
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 3.0e-76 288.9 192 68.8
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 5.1e-76 288.1 199 65.8
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 8.8e-76 287.3 192 67.2
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 8.8e-76 287.3 192 67.2
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 1.1e-75 287.0 192 66.7
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 1.5e-75 286.6 190 66.8
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 1.5e-75 286.6 194 65.5
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 2.0e-75 286.2 196 65.3
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 5.7e-75 284.6 183 69.9
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 1.7e-74 283.1 182 69.8
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 2.8e-74 282.3 198 65.7
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 4.8e-74 281.6 193 65.8
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 8.2e-74 280.8 199 62.8
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 8.2e-74 280.8 164 77.4
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 4.1e-73 278.5 164 76.2
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 1.7e-71 273.1 197 65.0
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 6.5e-71 271.2 169 72.2
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 2.5e-70 269.2 197 63.5
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 9.4e-70 267.3 197 60.4
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 1.6e-69 266.5 156 76.9
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 6.1e-69 264.6 197 60.9
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 3.0e-68 262.3 167 70.1
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 3.0e-68 262.3 196 57.1
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 4.4e-67 258.5 195 59.5
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 4.4e-67 258.5 163 69.9
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 5.7e-67 258.1 165 68.5
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.3e-66 254.6 166 73.5
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 1.1e-65 253.8 194 63.9
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 3.1e-65 252.3 200 58.0
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 5.3e-65 251.5 202 58.4
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 5.3e-65 251.5 194 61.3
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.1e-62 243.8 164 69.5
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 7.2e-62 241.1 219 51.6
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.1e-57 227.3 197 53.8
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 1.8e-57 226.5 195 54.4
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 4.5e-56 221.9 192 57.8
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 3.8e-55 218.8 132 69.7
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.1e-54 217.2 133 70.7
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.1e-54 217.2 133 70.7
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 2.5e-54 216.1 194 49.5
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 4.0e-52 208.8 193 48.7
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 6.8e-52 208.0 173 56.1
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 2.9e-47 192.6 200 50.0
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 1.4e-44 183.7 109 76.1
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 1.9e-38 163.3 224 39.7
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 7.3e-38 161.4 92 77.2
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.2e-37 160.6 269 36.4
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 7.5e-35 151.4 81 82.7
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 6.0e-32 141.7 111 61.3
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 3.3e-30 136.0 92 66.3
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 3.4e-27 125.9 75 78.7
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.1e-25 120.9 184 34.2
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 4.6e-24 115.5 71 69.0
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 5.4e-17 92.0 233 30.9
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 7.1e-17 91.7 135 36.3
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 8.6e-15 84.7 68 57.4
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 5.6e-14 82.0 62 66.1
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 9.5e-14 81.3 53 71.7
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 2.1e-13 80.1 57 63.2
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 4.4e-11 72.4 45 75.6
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 9.6e-06 54.7 74 37.8


User provided reference genes

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