Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 0.0e+00 1252.3 636 100.0
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.4e-284 982.6 660 80.9
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 6.6e-186 654.8 625 57.9
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 5.5e-180 635.2 654 54.1
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 6.0e-179 631.7 590 55.6
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 5.6e-177 625.2 625 54.4
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 7.4e-177 624.8 557 59.4
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 1.4e-175 620.5 616 55.0
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 1.2e-174 617.5 735 48.4
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 1.2e-174 617.5 599 54.4
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.0e-174 616.7 735 48.4
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 3.4e-174 615.9 608 56.7
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 2.2e-173 613.2 614 54.1
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 6.5e-173 611.7 669 50.5
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 8.4e-173 611.3 674 51.3
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 1.4e-172 610.5 673 50.2
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 7.1e-172 608.2 650 51.1
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 1.2e-171 607.4 669 50.1
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 1.3e-170 604.0 605 54.4
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 3.0e-170 602.8 619 52.8
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 3.9e-170 602.4 685 50.5
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.5e-169 600.5 689 51.4
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.9e-169 600.1 644 52.5
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 4.3e-169 599.0 610 54.9
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 5.7e-169 598.6 672 49.0
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 1.3e-168 597.4 670 50.0
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 1.6e-168 597.0 678 49.0
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.6e-168 597.0 671 50.5
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 4.8e-168 595.5 626 53.0
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.4e-167 594.0 670 50.3
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.8e-167 593.6 610 53.1
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.8e-167 593.6 610 53.1
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 3.1e-167 592.8 668 50.6
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 4.1e-167 592.4 594 53.7
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 5.3e-167 592.0 651 50.4
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 2.0e-166 590.1 607 52.4
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 2.6e-166 589.7 663 49.8
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 5.9e-166 588.6 673 49.9
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.7e-165 587.0 667 49.9
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 1.7e-165 587.0 670 50.0
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 2.2e-165 586.6 675 49.8
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 5.0e-165 585.5 663 50.4
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 1.4e-164 583.9 558 54.7
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 3.2e-164 582.8 674 49.7
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 3.2e-164 582.8 606 53.1
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 5.5e-164 582.0 675 47.7
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 9.3e-164 581.3 660 50.3
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 1.2e-163 580.9 605 52.9
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 1.6e-163 580.5 624 51.4
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.1e-163 580.1 660 50.0
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 2.7e-163 579.7 683 49.6
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 4.6e-163 578.9 665 48.7
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 7.9e-163 578.2 640 49.5
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 7.9e-163 578.2 600 52.8
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 1.3e-162 577.4 677 49.6
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 3.0e-162 576.2 602 53.2
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 8.7e-162 574.7 598 52.8
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 8.7e-162 574.7 669 49.9
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 2.5e-161 573.2 614 51.1
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 3.7e-160 569.3 603 52.2
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 3.7e-160 569.3 662 49.2
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 1.5e-158 563.9 604 51.0
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 5.0e-157 558.9 728 45.5
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 8.5e-157 558.1 603 51.2
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.1e-156 557.8 670 47.9
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 9.4e-156 554.7 622 50.2
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.6e-155 552.7 531 55.6
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.0e-154 551.2 672 47.5
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.8e-154 550.4 622 50.2
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 6.7e-154 548.5 669 48.4
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 2.6e-153 546.6 666 47.1
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 5.7e-153 545.4 668 48.1
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.7e-152 543.9 494 57.3
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.1e-151 541.2 669 48.3
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 2.4e-151 540.0 606 50.7
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 7.7e-150 535.0 637 47.6
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 6.5e-149 531.9 629 47.7
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 8.5e-149 531.6 679 47.0
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 2.5e-148 530.0 682 47.5
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 9.4e-148 528.1 616 50.2
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.0e-146 524.6 676 46.6
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 3.3e-145 519.6 648 48.0
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 3.3e-145 519.6 678 45.1
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 1.4e-143 514.2 623 48.6
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 3.1e-143 513.1 677 45.6
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 4.1e-143 512.7 607 47.0
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 7.0e-143 511.9 604 47.8
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.6e-142 510.8 678 46.2
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 4.5e-142 509.2 674 46.0
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 4.5e-142 509.2 521 49.7
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 1.0e-141 508.1 664 44.7
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 8.5e-141 505.0 673 45.3
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.2e-139 501.1 676 44.8
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 5.2e-138 495.7 636 44.5
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 3.3e-137 493.0 673 44.6
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 4.4e-137 492.7 673 44.4
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 2.2e-136 490.3 636 43.4
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 4.8e-136 489.2 618 46.6
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 4.8e-136 489.2 644 44.6
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 1.6e-134 484.2 660 44.8
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.6e-134 484.2 648 44.3
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 2.2e-133 480.3 655 44.1
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 2.9e-133 479.9 618 46.3
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 5.0e-133 479.2 677 43.9
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 6.5e-133 478.8 440 56.8
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 1.1e-132 478.0 618 46.1
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 1.1e-132 478.0 671 44.1
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 1.9e-132 477.2 518 49.4
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 1.9e-132 477.2 518 49.4
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 5.5e-132 475.7 522 50.0
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 1.2e-131 474.6 678 43.4
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 2.3e-130 470.3 516 48.8
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 6.3e-128 462.2 590 45.6
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 8.0e-123 445.3 666 42.6
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 2.0e-121 440.7 557 46.1
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 4.4e-121 439.5 578 44.3
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 7.0e-119 432.2 629 41.8
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 2.7e-118 430.3 651 41.0
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 2.9e-117 426.8 592 44.3
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 1.5e-116 424.5 539 46.4
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 1.7e-109 401.0 691 37.5
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.4e-95 354.8 642 36.3
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.0e-93 347.1 547 38.2
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 2.8e-91 340.5 642 37.1
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 4.1e-87 326.6 557 37.9
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 1.6e-86 324.7 409 45.5
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 2.1e-83 314.3 259 58.7
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 1.1e-82 312.0 627 38.0
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 5.1e-69 266.5 377 42.2
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 1.5e-68 265.0 221 59.7
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 2.7e-62 244.2 242 52.1
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 2.5e-60 237.7 308 44.5
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 4.1e-42 177.2 126 65.1
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 6.1e-30 136.7 241 39.0
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 9.5e-07 59.7 195 25.6
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 2.1e-06 58.5 106 34.9


User provided reference genes

Program Settings