Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 1.7e-171 605.9 307 100.0
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 3.3e-21 106.7 324 31.8
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 5.6e-21 105.9 334 34.1
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 1.6e-20 104.4 325 32.9
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 2.8e-20 103.6 347 32.6
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.8e-19 100.9 146 43.8
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.3e-19 100.5 146 43.2
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 4.0e-19 99.8 155 43.2
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 1.5e-18 97.8 155 44.5
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.3e-17 94.7 146 41.8
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 2.2e-17 94.0 155 38.7
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 4.9e-17 92.8 147 40.8
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 8.3e-17 92.0 154 43.5
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 8.3e-17 92.0 154 43.5
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 8.3e-17 92.0 148 39.9
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 1.8e-16 90.9 139 41.7
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.4e-16 90.5 146 39.7
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 2.4e-16 90.5 142 44.4
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 9.2e-16 88.6 148 37.2
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.6e-15 87.8 155 38.1
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.5e-15 86.7 156 38.5
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 4.6e-15 86.3 155 38.1
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 7.8e-15 85.5 151 45.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 7.8e-15 85.5 165 36.4
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.0e-14 85.1 151 38.4
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.0e-14 85.1 151 39.7
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.3e-14 84.7 148 39.2
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.7e-14 84.3 148 39.9
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 3.0e-14 83.6 163 36.8
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 3.9e-14 83.2 163 37.4
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 5.0e-14 82.8 155 36.1
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 6.6e-14 82.4 154 37.0
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 8.6e-14 82.0 156 39.7
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.1e-13 81.6 147 40.1
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.9e-13 80.9 147 40.1
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 3.3e-13 80.1 149 39.6
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 3.3e-13 80.1 96 44.8
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 7.3e-13 79.0 152 38.2
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 9.5e-13 78.6 110 50.0
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 9.5e-13 78.6 154 37.0
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 2.1e-12 77.4 145 39.3
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 2.8e-12 77.0 135 40.7
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 2.8e-12 77.0 153 35.3
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 4.7e-12 76.3 153 35.9
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 6.2e-12 75.9 156 37.2
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 8.0e-12 75.5 152 36.2
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 1.4e-11 74.7 154 40.3
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 1.4e-11 74.7 79 54.4
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 5.2e-11 72.8 168 35.1
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 1.2e-10 71.6 152 36.8
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.5e-10 71.2 139 38.1
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 2.0e-10 70.9 139 41.0
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.6e-10 70.5 90 43.3
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 5.8e-10 69.3 95 47.4
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 3.7e-09 66.6 156 36.5
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 4.9e-09 66.2 159 33.3
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 4.9e-09 66.2 153 34.6
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 6.4e-09 65.9 157 36.9
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 8.3e-09 65.5 155 38.1
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 8.3e-09 65.5 121 41.3
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 1.4e-08 64.7 159 35.8
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 4.1e-08 63.2 139 36.7
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 3.9e-06 56.6 153 34.0
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 3.9e-06 56.6 172 34.3
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 5.0e-06 56.2 158 32.3


User provided reference genes

Program Settings