Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 8.9e-93 343.6 172 100.0
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 8.7e-32 141.0 196 51.0
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 1.5e-31 140.2 169 50.9
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 3.7e-30 135.6 180 52.8
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.0e-27 127.5 180 47.2
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.0e-27 127.5 173 49.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 1.3e-27 127.1 185 48.6
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 6.5e-27 124.8 177 47.5
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.4e-26 123.6 169 50.9
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.9e-26 123.2 179 47.5
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 2.5e-26 122.9 172 48.3
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 5.5e-26 121.7 180 46.7
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 9.3e-26 120.9 176 49.4
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 2.3e-24 116.3 187 45.5
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.3e-24 116.3 150 53.3
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 3.9e-24 115.5 189 42.3
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 5.1e-24 115.2 179 44.7
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.9e-23 113.2 174 46.6
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 3.3e-23 112.5 177 44.6
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 5.7e-23 111.7 191 41.9
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 5.7e-23 111.7 176 46.6
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 1.3e-22 110.5 177 45.8
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.3e-22 110.5 186 43.5
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 1.7e-22 110.2 164 43.3
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.8e-22 109.4 186 44.1
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 3.7e-22 109.0 183 44.8
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 3.7e-22 109.0 189 38.6
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 4.8e-22 108.6 184 38.6
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 4.8e-22 108.6 170 44.7
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 8.2e-22 107.8 181 42.0
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 8.2e-22 107.8 172 44.2
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.1e-21 107.5 189 45.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 1.8e-21 106.7 176 45.5
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 4.1e-21 105.5 173 42.2
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 5.3e-21 105.1 120 52.5
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 5.3e-21 105.1 171 45.6
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 5.3e-21 105.1 155 47.1
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 9.1e-21 104.4 110 56.4
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 1.2e-20 104.0 179 45.3
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.2e-20 104.0 183 44.3
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.5e-20 103.6 172 44.8
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.5e-20 103.6 178 43.8
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 2.0e-20 103.2 186 44.1
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 2.0e-20 103.2 176 43.8
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 2.6e-20 102.8 168 42.9
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 2.6e-20 102.8 174 42.5
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 4.5e-20 102.1 154 48.1
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.3e-19 100.5 166 41.0
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.3e-19 100.5 177 45.8
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 3.8e-19 99.0 180 42.8
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 8.5e-19 97.8 153 43.1
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.1e-18 97.4 149 47.0
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.4e-18 97.1 179 41.9
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.4e-18 97.1 176 43.8
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.5e-18 96.3 163 39.9
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 2.5e-18 96.3 171 40.9
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 4.2e-18 95.5 177 40.7
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 5.5e-18 95.1 183 39.3
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 5.5e-18 95.1 177 43.5
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 7.2e-18 94.7 130 46.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 9.4e-18 94.4 134 47.0
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 9.4e-18 94.4 198 39.4
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.2e-17 94.0 198 39.4
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 1.6e-17 93.6 175 44.6
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 6.1e-17 91.7 180 39.4
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 7.9e-17 91.3 181 41.4
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 1.4e-16 90.5 183 38.3
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 2.3e-16 89.7 182 39.6
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.0e-16 89.4 112 49.1
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 3.0e-16 89.4 173 37.6
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 3.9e-16 89.0 182 40.7
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.9e-16 89.0 194 37.1
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 6.7e-16 88.2 184 38.6
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-15 87.0 178 39.3
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-15 86.3 149 43.0
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 2.6e-15 86.3 154 40.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 4.4e-15 85.5 173 35.8
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-14 84.0 83 53.0
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 1.3e-14 84.0 182 41.8
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.3e-14 84.0 181 40.9
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.7e-14 83.6 123 46.3
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.7e-14 83.6 153 41.8
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 1.7e-14 83.6 90 51.1
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 1.7e-14 83.6 172 41.9
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 2.8e-14 82.8 164 45.7
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 3.7e-14 82.4 174 37.4
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 4.8e-14 82.0 163 38.7
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 4.8e-14 82.0 67 59.7
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.1e-13 80.9 173 37.0
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.4e-13 80.5 187 39.6
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.8e-13 80.1 165 37.0
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 3.1e-13 79.3 186 37.1
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.9e-13 78.2 75 58.7
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 6.9e-13 78.2 130 42.3
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 9.1e-13 77.8 145 41.4
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 1.5e-12 77.0 182 36.8
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 1.5e-12 77.0 182 36.8
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 2.0e-12 76.6 172 36.6
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 3.4e-12 75.9 72 56.9
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 3.4e-12 75.9 181 38.7
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.4e-12 75.9 162 40.7
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 5.9e-12 75.1 160 36.9
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.0e-11 74.3 137 38.0
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.0e-11 74.3 123 42.3
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.7e-11 73.6 90 47.8
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 8.5e-11 71.2 179 36.3
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 4.2e-10 68.9 165 35.8
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 7.2e-10 68.2 78 53.8
TAR383G0638 Trochodendron aralioides HOM05D000726 ORTHO05D000799 9.4e-10 67.8 142 40.1
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.1e-09 66.6 90 44.4
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 2.7e-09 66.2 129 38.0
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 4.7e-09 65.5 144 38.2
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 8.0e-09 64.7 82 45.1
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.4e-08 63.9 124 45.2
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 3.9e-08 62.4 155 38.7
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 6.7e-08 61.6 141 39.0
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 1.5e-07 60.5 69 52.2
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 2.0e-07 60.1 176 35.2
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 4.4e-07 58.9 169 35.5
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 1.7e-06 57.0 141 40.4
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.2e-06 56.6 65 47.7


User provided reference genes

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