Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g21513_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D019566 1.7e-151 539.3 263 100.0
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.3e-23 113.6 107 59.8
MBI16_g18207_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008753 7.3e-22 108.6 78 69.2
MBI13_g31559_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008753 3.4e-19 99.8 96 54.2
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.1e-16 90.5 85 55.3
MBI19_g17588_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008753 4.6e-16 89.4 78 61.5
Hma1.2p1_0314F.1_g121910 Hydrangea macrophylla HOM05D000204 ORTHO05D008753 8.7e-15 85.1 78 52.6
TAR383G0113 Trochodendron aralioides HOM05D000204 ORTHO05D008753 4.3e-14 82.8 78 53.8
TAR383G0771 Trochodendron aralioides HOM05D000204 ORTHO05D008753 5.6e-14 82.4 78 53.8
TAR626G1008 Trochodendron aralioides HOM05D000204 ORTHO05D008753 2.1e-13 80.5 78 52.6
Dinv26461 Davidia involucrata HOM05D000204 ORTHO05D008753 6.2e-13 79.0 76 48.7
MBI10_g03525_MAGBIO Magnolia biondii HOM05D030523 ORTHO05D008753 8.1e-13 78.6 57 71.9
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 3.1e-12 76.6 70 58.6
MBI18_g44818_MAGBIO Magnolia biondii HOM05D030523 ORTHO05D008753 5.3e-12 75.9 57 68.4
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 9.0e-12 75.1 58 63.8
TAR625G0178 Trochodendron aralioides HOM05D000204 ORTHO05D008753 9.0e-12 75.1 79 50.6
Aqoxy7G02695 Aquilegia oxysepala HOM05D000204 ORTHO05D008753 1.2e-11 74.7 79 49.4
MBI05_g12510_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008753 2.0e-11 73.9 47 74.5
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 2.6e-11 73.6 98 43.9
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 5.8e-11 72.4 104 44.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.6e-11 72.0 82 52.4
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 7.6e-11 72.0 102 43.1
Potri.018G132400 Populus trichocarpa HOM05D000204 ORTHO05D008753 1.3e-10 71.2 80 55.0
Prupe.1G067400 Prunus persica HOM05D000204 ORTHO05D008753 1.3e-10 71.2 83 48.2
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 1.7e-10 70.9 116 39.7
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.7e-10 70.9 61 59.0
TAR636G0313 Trochodendron aralioides HOM05D000204 ORTHO05D008753 1.7e-10 70.9 79 49.4
Nn8g41046 Nelumbo nucifera HOM05D000204 ORTHO05D008753 2.2e-10 70.5 78 47.4
Prupe.1G000200 Prunus persica HOM05D036140 ORTHO05D008753 2.2e-10 70.5 83 47.0
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 4.9e-10 69.3 75 48.0
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 8.4e-10 68.6 132 38.6
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.9e-09 67.4 82 50.0
Sabra18G0112100 Salix brachista HOM05D000204 ORTHO05D008753 1.9e-09 67.4 80 51.2
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 2.4e-09 67.0 68 55.9
Sabra06G0052500 Salix brachista HOM05D000204 ORTHO05D008753 7.1e-09 65.5 79 46.8
MBI18_g21523_MAGBIO Magnolia biondii HOM05D030523 ORTHO05D008753 9.3e-09 65.1 51 66.7
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 9.3e-09 65.1 77 53.2
CiPaw.16G102900 Carya illinoinensis HOM05D000204 ORTHO05D008753 1.6e-08 64.3 81 43.2
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.6e-08 64.3 87 43.7
Potri.006G070600 Populus trichocarpa HOM05D000204 ORTHO05D008753 1.6e-08 64.3 79 50.6
CDE05G3321 Ceratophyllum demersum HOM05D000112 ORTHO05D001918 2.1e-08 63.9 61 49.2
Oeu036943.1 Olea europaea HOM05D000204 ORTHO05D008753 2.1e-08 63.9 86 45.3
Rhsim01G0113100 Rhododendron simsii HOM05D000204 ORTHO05D008753 2.1e-08 63.9 78 44.9
Sopen05g027600 Solanum pennellii HOM05D000204 ORTHO05D008753 2.1e-08 63.9 79 49.4
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.7e-08 63.5 67 53.7
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.7e-08 63.5 77 50.6
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 3.5e-08 63.2 79 45.6
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 4.6e-08 62.8 64 53.1
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 4.6e-08 62.8 64 53.1
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 4.6e-08 62.8 76 47.4
Nitab4.5_0003409g0010 Nicotiana tabacum HOM05D000204 ORTHO05D008753 7.9e-08 62.0 82 43.9
Oeu021034.1 Olea europaea HOM05D000204 ORTHO05D008753 7.9e-08 62.0 83 43.4
CiPaw.15G154400 Carya illinoinensis HOM05D000204 ORTHO05D008753 1.0e-07 61.6 79 44.3
Oeu011822.1 Olea europaea HOM05D000204 ORTHO05D008753 1.0e-07 61.6 87 43.7
FvH4_5g29950 Fragaria vesca HOM05D000204 ORTHO05D008753 1.3e-07 61.2 82 42.7
FAN04G2892 Fragaria x ananassa HOM05D000204 ORTHO05D008753 1.3e-07 61.2 81 43.2
FAN13G3022 Fragaria x ananassa HOM05D000204 ORTHO05D008753 1.3e-07 61.2 81 43.2
MD16G1240600 Malus domestica HOM05D000204 ORTHO05D008753 1.3e-07 61.2 83 42.2
PGSC0003DMG400013691 Solanum tuberosum HOM05D000204 ORTHO05D008753 1.3e-07 61.2 79 46.8
ATR1171G001 Amborella trichopoda HOM05D004653 ORTHO05D019566 1.8e-07 60.8 56 55.4
Solyc05g046320.1 Solanum lycopersicum HOM05D000204 ORTHO05D008753 2.3e-07 60.5 79 46.8
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.0e-07 60.1 53 56.6
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 3.0e-07 60.1 76 48.7
FAN08G3401 Fragaria x ananassa HOM05D000204 ORTHO05D008753 3.9e-07 59.7 68 45.6
Nitab4.5_0000833g0080 Nicotiana tabacum HOM05D000204 ORTHO05D008753 3.9e-07 59.7 82 43.9
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.1e-07 59.3 53 62.3
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.1e-07 59.3 53 62.3
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 5.1e-07 59.3 102 42.2
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 5.1e-07 59.3 68 47.1
Nitab4.5_0009532g0010 Nicotiana tabacum HOM05D000204 ORTHO05D008753 5.1e-07 59.3 82 45.1
CDE05G1994 Ceratophyllum demersum HOM05D000112 ORTHO05D001918 6.7e-07 58.9 61 45.9
Haze_19035 Corylus avellana HOM05D000204 ORTHO05D008753 6.7e-07 58.9 80 43.8
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 6.7e-07 58.9 53 56.6
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 8.7e-07 58.5 138 36.2
FAN18G4554 Fragaria x ananassa HOM05D000204 ORTHO05D008753 8.7e-07 58.5 68 45.6
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 8.7e-07 58.5 115 41.7
vmacro20792 Vaccinium macrocarpon HOM05D000204 ORTHO05D008753 8.7e-07 58.5 74 41.9
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.1e-06 58.2 72 50.0
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.1e-06 58.2 72 50.0
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.1e-06 58.2 72 50.0
CAN.G1623.1 Capsicum annuum HOM05D000204 ORTHO05D008753 1.5e-06 57.8 82 41.5
Ciclev10013946m.g Citrus clementina HOM05D000204 ORTHO05D008753 1.5e-06 57.8 80 41.2
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 1.5e-06 57.8 48 58.3
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.9e-06 57.4 70 48.6
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.9e-06 57.4 103 35.9
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.9e-06 57.4 103 35.9
Hma1.2p1_0223F.1_g094060 Hydrangea macrophylla HOM05D000204 ORTHO05D008753 1.9e-06 57.4 80 42.5
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.9e-06 57.4 65 49.2
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.9e-06 57.4 77 48.1
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 2.5e-06 57.0 68 51.5
MSTRG.19390 Avicennia marina HOM05D000204 ORTHO05D008753 4.3e-06 56.2 86 41.9
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 4.3e-06 56.2 116 36.2
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 4.3e-06 56.2 42 64.3
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.3e-06 56.2 42 64.3
Cfa020721 Carpinus fangiana HOM05D000204 ORTHO05D008753 5.6e-06 55.8 84 44.0
Dinv02615 Davidia involucrata HOM05D000204 ORTHO05D008753 5.6e-06 55.8 57 49.1
HanXRQChr12g0359261 Helianthus annuus HOM05D000204 ORTHO05D008753 5.6e-06 55.8 81 40.7
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 5.6e-06 55.8 49 57.1
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 7.4e-06 55.5 79 46.8
Lsat_1_v5_gn_5_82320 Lactuca sativa HOM05D000204 ORTHO05D008753 7.4e-06 55.5 82 39.0
Migut.J00825 Erythranthe guttata HOM05D000204 ORTHO05D008753 9.6e-06 55.1 87 37.9
RcHm_v2.0_Chr7g0223781 Rosa chinensis HOM05D000204 ORTHO05D008753 9.6e-06 55.1 82 40.2
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 9.6e-06 55.1 77 46.8


User provided reference genes

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