Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 3.8e-134 481.5 242 100.0
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.1e-72 277.3 244 63.1
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 8.2e-60 234.6 245 54.7
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 2.9e-57 226.1 216 56.5
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.6e-55 218.8 241 54.4
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.0e-54 216.1 267 48.7
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 4.3e-53 212.2 206 54.9
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 8.2e-52 208.0 246 50.4
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 1.1e-51 207.6 246 52.4
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 3.1e-51 206.1 247 52.6
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 2.0e-50 203.4 242 47.1
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 3.4e-50 202.6 242 47.1
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 7.7e-50 201.4 248 48.4
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 3.8e-49 199.1 245 48.6
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.4e-48 197.2 250 47.6
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 2.5e-48 196.4 248 48.0
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 3.2e-48 196.1 243 45.7
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 4.6e-47 192.2 195 54.4
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.0e-46 191.0 240 46.7
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 1.4e-46 190.7 235 47.2
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 1.8e-46 190.3 185 58.9
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 3.9e-46 189.1 237 46.0
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 5.1e-46 188.7 173 55.5
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 5.1e-46 188.7 234 47.9
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 1.1e-45 187.6 180 55.6
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 2.0e-45 186.8 222 50.9
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 2.5e-45 186.4 245 46.9
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 3.3e-45 186.0 234 47.4
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 3.7e-44 182.6 213 46.9
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 9.1e-43 177.9 203 52.2
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.2e-42 177.6 238 45.8
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 2.0e-42 176.8 211 47.9
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 4.5e-42 175.6 214 46.7
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 5.9e-42 175.3 222 49.1
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 2.2e-41 173.3 244 46.7
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 2.9e-41 172.9 247 42.5
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 3.8e-41 172.6 227 44.1
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 3.8e-41 172.6 231 46.3
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 3.8e-41 172.6 237 46.0
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 8.5e-41 171.4 142 60.6
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 1.4e-40 170.6 200 50.5
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 1.4e-40 170.6 162 56.2
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 3.2e-40 169.5 150 56.7
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 3.2e-40 169.5 245 43.3
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 3.2e-40 169.5 245 44.5
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 4.2e-40 169.1 188 49.5
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 9.4e-40 167.9 206 48.5
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 2.1e-39 166.8 208 48.1
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 2.7e-39 166.4 163 55.2
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 6.1e-39 165.2 248 42.3
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 6.1e-39 165.2 131 60.3
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 2.3e-38 163.3 164 49.4
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 5.1e-38 162.2 243 41.2
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 1.5e-37 160.6 187 50.8
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 1.5e-37 160.6 206 44.2
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 2.0e-37 160.2 174 50.6
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 4.4e-37 159.1 219 43.8
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 3.1e-35 152.9 248 40.3
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 4.1e-35 152.5 157 50.3
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 7.0e-35 151.8 149 53.7
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.6e-34 150.6 178 47.2
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 2.6e-34 149.8 154 48.1
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 4.5e-34 149.1 246 35.0
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 7.7e-34 148.3 228 43.0
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 2.2e-33 146.7 221 42.5
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.9e-33 146.4 160 50.0
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 3.8e-33 146.0 160 50.0
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 1.1e-32 144.4 157 49.7
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 2.5e-32 143.3 139 52.5
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 5.5e-32 142.1 132 53.8
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 5.5e-32 142.1 132 53.8
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 5.5e-32 142.1 132 53.8
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.2e-31 141.0 229 41.9
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 1.6e-31 140.6 157 50.3
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 2.1e-31 140.2 132 53.0
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 2.7e-31 139.8 162 48.1
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 5.2e-30 135.6 121 54.5
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 3.3e-29 132.9 258 38.0
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 6.3e-28 128.6 244 41.4
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 1.3e-25 120.9 154 40.9
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.3e-25 120.9 207 37.2
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 2.9e-25 119.8 185 36.8
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 6.5e-25 118.6 163 39.3
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 8.5e-25 118.2 151 42.4
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.1e-24 117.9 178 38.8
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 5.5e-24 115.5 155 39.4
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.2e-23 114.4 145 39.3
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.6e-23 114.0 130 43.8
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 2.1e-23 113.6 128 43.0
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 2.1e-23 113.6 128 43.0
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 2.1e-23 113.6 153 40.5
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 2.1e-23 113.6 153 39.2
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.7e-23 112.5 152 40.8
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 4.7e-23 112.5 129 41.9
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 6.1e-23 112.1 153 37.9
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.0e-22 111.3 228 31.6
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 2.3e-22 110.2 151 38.4
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 3.0e-22 109.8 144 36.8
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 3.0e-22 109.8 144 36.8
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 5.2e-22 109.0 129 40.3
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 6.8e-22 108.6 159 39.0
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 8.8e-22 108.2 159 38.4
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 1.2e-21 107.8 128 40.6
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 1.5e-21 107.5 128 41.4
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 2.0e-21 107.1 152 35.5
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 2.6e-21 106.7 128 41.4
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 2.6e-21 106.7 129 39.5
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 5.7e-21 105.5 127 41.7
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 7.5e-21 105.1 132 37.9
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 1.3e-20 104.4 132 37.9
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 1.3e-20 104.4 132 37.9
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 1.3e-20 104.4 132 37.9
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.7e-20 104.0 131 36.6
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 1.7e-20 104.0 132 37.9
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.2e-20 103.6 132 37.9
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 2.2e-20 103.6 151 37.1
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 3.7e-20 102.8 130 40.0
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 8.3e-20 101.7 132 38.6
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 1.1e-19 101.3 128 38.3
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 5.4e-19 99.0 127 40.2
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 7.0e-19 98.6 100 51.0
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 7.0e-19 98.6 154 39.0
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 9.1e-19 98.2 122 38.5
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.2e-18 97.8 182 35.2
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.2e-18 97.8 182 35.2
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 1.2e-18 97.8 129 39.5
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.6e-18 97.4 130 40.8
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.6e-18 97.4 134 35.1
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 2.0e-18 97.1 117 41.0
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 2.7e-18 96.7 127 39.4
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 5.9e-18 95.5 182 34.6
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 5.9e-18 95.5 182 34.6
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 5.9e-18 95.5 182 34.6
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 7.7e-18 95.1 129 37.2
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.0e-17 94.7 141 36.9
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.3e-17 94.4 149 33.6
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 1.7e-17 94.0 132 36.4
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 1.7e-17 94.0 132 36.4
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 1.7e-17 94.0 119 42.9
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.2e-17 93.6 129 35.7
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 2.9e-17 93.2 121 37.2
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 3.8e-17 92.8 130 36.2
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 6.5e-17 92.0 161 32.3
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 6.5e-17 92.0 154 34.4
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 6.5e-17 92.0 150 35.3
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.1e-16 91.3 70 64.3
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 4.2e-16 89.4 128 35.2
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 3.6e-15 86.3 130 36.9
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 6.1e-15 85.5 116 35.3
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.0e-14 84.7 93 39.8
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 2.3e-14 83.6 121 34.7
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 2.2e-12 77.0 113 32.7
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 9.2e-11 71.6 83 42.2
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 9.2e-11 71.6 128 33.6
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 1.6e-10 70.9 90 36.7
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 2.3e-09 67.0 88 51.1
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 2.3e-09 67.0 72 40.3
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 3.8e-09 66.2 97 35.1
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.1e-08 64.7 163 30.1
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.9e-08 63.9 60 46.7
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 2.5e-08 63.5 106 34.0
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 3.3e-08 63.2 72 37.5
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 4.0e-06 56.2 119 29.4


User provided reference genes

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