Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 6.1e-47 190.7 109 100.0
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.5e-08 63.2 38 81.6
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 3.3e-08 62.0 31 87.1
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 4.3e-08 61.6 38 81.6
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 4.3e-08 61.6 38 81.6
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 4.3e-08 61.6 38 81.6
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 5.6e-08 61.2 38 78.9
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.6e-08 61.2 38 78.9
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.6e-08 61.2 38 78.9
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 5.6e-08 61.2 38 78.9
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 7.3e-08 60.8 38 78.9
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 7.3e-08 60.8 36 75.0
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 9.5e-08 60.5 35 74.3
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 9.5e-08 60.5 38 76.3
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.2e-07 60.1 38 76.3
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.2e-07 60.1 36 77.8
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 1.2e-07 60.1 43 67.4
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.2e-07 60.1 38 71.1
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.6e-07 59.7 35 77.1
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 1.6e-07 59.7 35 71.4
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.6e-07 59.7 38 76.3
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.6e-07 59.7 38 78.9
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.6e-07 59.7 34 88.2
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 2.1e-07 59.3 38 76.3
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 2.8e-07 58.9 31 80.6
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 2.8e-07 58.9 47 66.0
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 2.8e-07 58.9 31 80.6
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 2.8e-07 58.9 40 72.5
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 3.6e-07 58.5 31 80.6
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 4.7e-07 58.2 32 78.1
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 4.7e-07 58.2 32 78.1
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 4.7e-07 58.2 30 83.3
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 4.7e-07 58.2 41 65.9
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 4.7e-07 58.2 30 83.3
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 8.0e-07 57.4 35 71.4
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 1.1e-06 57.0 33 78.8
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.8e-06 56.2 35 68.6
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 1.8e-06 56.2 32 71.9
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.8e-06 56.2 32 71.9
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.3e-06 55.8 38 63.2
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.3e-06 55.8 38 63.2
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 3.1e-06 55.5 35 68.6
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 3.1e-06 55.5 38 71.1
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 3.1e-06 55.5 44 61.4
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 3.1e-06 55.5 33 69.7
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 3.1e-06 55.5 37 70.3
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 4.0e-06 55.1 31 74.2
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 4.0e-06 55.1 35 68.6
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 6.8e-06 54.3 31 74.2
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 6.8e-06 54.3 44 59.1
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 8.9e-06 53.9 35 65.7
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 8.9e-06 53.9 35 65.7
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 8.9e-06 53.9 35 65.7
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 8.9e-06 53.9 36 72.2
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 8.9e-06 53.9 35 65.7
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 8.9e-06 53.9 41 63.4
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 8.9e-06 53.9 41 63.4
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 8.9e-06 53.9 36 69.4


User provided reference genes

Program Settings