Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g17294_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 5.3e-50 200.7 99 100.0
MBI04_g30107_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 1.6e-49 199.1 99 99.0
TAR626G1633 Trochodendron aralioides HOM05D006831 ORTHO05D008256 7.5e-28 127.1 94 64.9
Nn6g35309 Nelumbo nucifera HOM05D006831 ORTHO05D008256 1.3e-24 116.3 94 64.9
Potri.001G189400 Populus trichocarpa HOM05D006831 ORTHO05D008256 1.7e-24 115.9 94 59.6
Potri.011G047800 Populus trichocarpa HOM05D006831 ORTHO05D008256 3.0e-24 115.2 94 57.4
CSS0014632 Camellia sinensis var. sinensis HOM05D006831 ORTHO05D008256 3.9e-24 114.8 94 60.6
TAR383G0884 Trochodendron aralioides HOM05D006831 ORTHO05D008256 6.6e-24 114.0 92 60.9
Hma1.2p1_0430F.1_g151466 Hydrangea macrophylla HOM05D006831 ORTHO05D008256 8.6e-24 113.6 94 57.4
Sabra11G0033200 Salix brachista HOM05D006831 ORTHO05D008256 1.9e-23 112.5 95 57.9
Atru.chr1.3517 Acer truncatum HOM05D006831 ORTHO05D008256 7.3e-23 110.5 94 55.3
Prupe.3G060100 Prunus persica HOM05D006831 ORTHO05D008256 9.5e-23 110.2 91 61.5
GSVIVG01017000001 Vitis vinifera HOM05D006831 ORTHO05D008256 9.5e-23 110.2 95 57.9
CANSAT56G0873 Cannabis sativa HOM05D006831 ORTHO05D008256 1.6e-22 109.4 94 56.4
vmacro18857 Vaccinium macrocarpon HOM05D006831 ORTHO05D008256 1.6e-22 109.4 94 60.6
Actinidia21708 Actinidia chinensis HOM05D006831 ORTHO05D008256 3.6e-22 108.2 94 58.5
Sabra01G0151300 Salix brachista HOM05D006831 ORTHO05D008256 1.1e-21 106.7 94 54.3
Gohir.D10G067400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 4.0e-21 104.8 92 55.4
Gorai.011G071900 Gossypium raimondii HOM05D006831 ORTHO05D008256 4.0e-21 104.8 92 55.4
Ciclev10025849m.g Citrus clementina HOM05D006831 ORTHO05D008256 5.2e-21 104.4 100 58.0
Dinv30442 Davidia involucrata HOM05D006831 ORTHO05D008256 5.2e-21 104.4 92 56.5
Aqoxy7G01449 Aquilegia oxysepala HOM05D006831 ORTHO05D008256 6.8e-21 104.0 87 56.3
Eucgr.F03071 Eucalyptus grandis HOM05D006831 ORTHO05D008256 6.8e-21 104.0 92 53.3
QL05p020342 Quercus lobata HOM05D006831 ORTHO05D008256 6.8e-21 104.0 100 54.0
Gohir.A10G066100 Gossypium hirsutum HOM05D006831 ORTHO05D008256 8.9e-21 103.6 92 55.4
MD09G1204500 Malus domestica HOM05D006831 ORTHO05D008256 8.9e-21 103.6 93 58.1
Peaxi162Scf00038g00918 Petunia axillaris HOM05D006831 ORTHO05D008256 8.9e-21 103.6 94 47.9
Rhsim08G0227100 Rhododendron simsii HOM05D006831 ORTHO05D008256 8.9e-21 103.6 95 56.8
PGR102G2866 Punica granatum HOM05D006831 ORTHO05D008256 1.2e-20 103.2 97 53.6
PGSC0003DMG400002528 Solanum tuberosum HOM05D006831 ORTHO05D008256 1.2e-20 103.2 94 47.9
Lj5A54G57 Lonicera japonica HOM05D006831 ORTHO05D008256 1.5e-20 102.8 98 52.0
Actinidia32697 Actinidia chinensis HOM05D006831 ORTHO05D008256 4.4e-20 101.3 93 57.0
RcHm_v2.0_Chr2g0140341 Rosa chinensis HOM05D006831 ORTHO05D008256 7.5e-20 100.5 91 56.0
Sopen03g039800 Solanum pennellii HOM05D006831 ORTHO05D008256 9.8e-20 100.1 92 46.7
CiPaw.02G146100 Carya illinoinensis HOM05D006831 ORTHO05D008256 1.3e-19 99.8 94 54.3
Oeu050599.1 Olea europaea HOM05D006831 ORTHO05D008256 1.3e-19 99.8 91 53.8
Thecc.06G098700 Theobroma cacao HOM05D006831 ORTHO05D008256 1.3e-19 99.8 92 54.3
CAN.G1143.6 Capsicum annuum HOM05D006831 ORTHO05D008256 2.2e-19 99.0 94 47.9
FAN05G2796 Fragaria x ananassa HOM05D006831 ORTHO05D008256 2.9e-19 98.6 92 53.3
Duzib235G1306 Durio zibethinus HOM05D006831 ORTHO05D008256 4.9e-19 97.8 92 53.3
HanXRQChr02g0032201 Helianthus annuus HOM05D006831 ORTHO05D008256 4.9e-19 97.8 92 46.7
PSO210G4514 Papaver somniferum HOM05D006831 ORTHO05D008256 4.9e-19 97.8 89 55.1
PSO210G6112 Papaver somniferum HOM05D006831 ORTHO05D008256 4.9e-19 97.8 89 53.9
Solyc03g120970.3 Solanum lycopersicum HOM05D006831 ORTHO05D008256 4.9e-19 97.8 92 47.8
Cfa003655 Carpinus fangiana HOM05D006831 ORTHO05D008256 6.4e-19 97.4 85 60.0
Migut.I00901 Erythranthe guttata HOM05D006831 ORTHO05D008256 6.4e-19 97.4 91 50.5
Lj3g0006655 Lotus japonicus HOM05D006831 ORTHO05D008256 8.3e-19 97.1 91 52.7
arahy.Tifrunner.gnm1.ann1.4LXS91 Arachis hypogaea HOM05D006831 ORTHO05D008256 1.4e-18 96.3 94 54.3
DCAR_016191 Daucus carota HOM05D006831 ORTHO05D008256 1.9e-18 95.9 92 51.1
Lsat_1_v5_gn_1_36980 Lactuca sativa HOM05D006831 ORTHO05D008256 1.9e-18 95.9 93 49.5
TWI12G0407 Tripterygium wilfordii HOM05D006831 ORTHO05D008256 2.4e-18 95.5 94 53.2
CiPaw.01G232000 Carya illinoinensis HOM05D006831 ORTHO05D008256 4.1e-18 94.7 101 49.5
SGA_v2.0_scaffold66G22536 Striga asiatica HOM05D001613 ORTHO05D008256 4.1e-18 94.7 91 47.3
arahy.Tifrunner.gnm1.ann1.U3LBHC Arachis hypogaea HOM05D006831 ORTHO05D008256 7.0e-18 94.0 94 52.1
COL.COLO4_30498 Corchorus olitorius HOM05D006831 ORTHO05D008256 9.2e-18 93.6 97 50.5
FAN02G3719 Fragaria x ananassa HOM05D006831 ORTHO05D008256 9.2e-18 93.6 92 51.1
FvH4_6g32300 Fragaria vesca HOM05D006831 ORTHO05D008256 2.0e-17 92.4 91 53.8
Phvul.005G166600 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 2.0e-17 92.4 92 52.2
FAN14G1280 Fragaria x ananassa HOM05D006831 ORTHO05D008256 3.5e-17 91.7 92 52.2
Nitab4.5_0009505g0030 Nicotiana tabacum HOM05D006831 ORTHO05D008256 4.6e-17 91.3 78 55.1
Glyma.07G015900 Glycine max HOM05D006831 ORTHO05D008256 2.3e-16 89.0 91 49.5
Gohir.D03G058400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 2.3e-16 89.0 92 52.2
Gorai.003G062200 Gossypium raimondii HOM05D006831 ORTHO05D008256 2.3e-16 89.0 92 52.2
Medtr8g014330 Medicago truncatula HOM05D006831 ORTHO05D008256 2.3e-16 89.0 94 46.8
Gohir.A02G117700 Gossypium hirsutum HOM05D006831 ORTHO05D008256 3.0e-16 88.6 92 51.1
Phvul.010G145700 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 5.0e-16 87.8 99 47.5
VMungo1080G0645 Vigna mungo HOM05D006831 ORTHO05D008256 8.6e-16 87.0 89 53.9
Glyma.08G201400 Glycine max HOM05D006831 ORTHO05D008256 1.5e-15 86.3 94 46.8
HanXRQChr10g0313251 Helianthus annuus HOM05D006831 ORTHO05D008256 1.5e-15 86.3 93 41.9
TPR.G29201 Trifolium pratense HOM05D006831 ORTHO05D008256 1.5e-15 86.3 94 45.7
MSTRG.11030 Avicennia marina HOM05D006831 ORTHO05D008256 1.9e-15 85.9 92 42.4
Nitab4.5_0012387g0010 Nicotiana tabacum HOM05D006831 ORTHO05D008256 4.3e-15 84.7 74 54.1
ECA247G2417 Erigeron canadensis HOM05D006831 ORTHO05D008256 7.3e-15 84.0 76 52.6
VMungo0331G1726 Vigna mungo HOM05D006831 ORTHO05D008256 7.3e-15 84.0 94 46.8
AUR62031907 Chenopodium quinoa HOM05D006831 ORTHO05D008256 1.1e-13 80.1 93 43.0
Lalb_Chr04g0262951 Lupinus albus HOM05D006831 ORTHO05D008256 1.1e-13 80.1 92 46.7
VMungo0331G1511 Vigna mungo HOM05D006831 ORTHO05D008256 8.9e-13 77.0 105 42.9
Cc04_g02630 Coffea canephora HOM05D006831 ORTHO05D008256 1.5e-12 76.3 98 39.8
ClCG00G002730 Citrullus lanatus HOM05D006831 ORTHO05D008256 5.8e-12 74.3 107 39.3
ClCG07G013280 Citrullus lanatus HOM05D006831 ORTHO05D008256 5.8e-12 74.3 107 39.3
Haze_06254 Corylus avellana HOM05D006831 ORTHO05D008256 7.5e-12 73.9 73 54.8
HPP92_006371 Vanilla planifolia HOM05D006831 ORTHO05D008256 1.3e-11 73.2 94 39.4
Sed0018864 Sechium edule HOM05D006831 ORTHO05D008256 1.9e-10 69.3 100 42.0
CsaV3_3G023650 Cucumis sativus L. HOM05D006831 ORTHO05D008256 5.4e-10 67.8 105 38.1
MELO3C012995.2 Cucumis melo HOM05D006831 ORTHO05D008256 2.1e-09 65.9 107 36.4
THA.LOC104801499 Tarenaya hassleriana HOM05D006831 ORTHO05D008256 7.8e-09 63.9 92 40.2
Medtr7g072635 Medicago truncatula HOM05D006353 ORTHO05D007993 2.3e-08 62.4 92 34.8
Medtr7g072870 Medicago truncatula HOM05D006353 ORTHO05D007993 2.3e-08 62.4 92 34.8
TPR.G26913 Trifolium pratense HOM05D006353 ORTHO05D007993 3.0e-08 62.0 92 38.0
EL10Ac9g21213 Beta vulgaris HOM05D006831 ORTHO05D008256 5.1e-08 61.2 94 37.2
Glyma.18G215200 Glycine max HOM05D006353 ORTHO05D007993 5.1e-08 61.2 95 35.8
CARHR262750 Cardamine hirsuta HOM05D006831 ORTHO05D008256 6.6e-08 60.8 97 39.2
Lalb_Chr19g0124031 Lupinus albus HOM05D006353 ORTHO05D007993 1.5e-07 59.7 95 34.7
Phvul.008G084100 Phaseolus vulgaris HOM05D006353 ORTHO05D007993 1.9e-07 59.3 95 36.8
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 2.5e-07 58.9 95 33.7
AL2G41800 Arabidopsis lyrata HOM05D006831 ORTHO05D008256 4.3e-07 58.2 97 38.1
Nn2g10337 Nelumbo nucifera HOM05D006353 ORTHO05D007993 7.3e-07 57.4 93 34.4
MBI03_g38281_MAGBIO Magnolia biondii HOM05D006353 ORTHO05D007993 1.2e-06 56.6 95 35.8
Os01g0744200 Oryza sativa ssp. japonica HOM05D006831 ORTHO05D008256 1.6e-06 56.2 97 40.2
Os01g0823400 Oryza sativa ssp. japonica HOM05D006353 ORTHO05D007993 2.8e-06 55.5 87 36.8


User provided reference genes

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