Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g15062_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 4.5e-103 377.9 184 100.0
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 5.9e-18 95.1 166 42.2
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 1.6e-10 70.5 166 35.5
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 1.6e-10 70.5 159 36.5
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 3.5e-10 69.3 166 32.5
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 4.5e-10 68.9 167 34.7
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 5.9e-10 68.6 165 33.9
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 7.7e-10 68.2 160 33.8
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 1.7e-09 67.0 166 32.5
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 1.7e-09 67.0 161 32.9
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 1.7e-09 67.0 166 31.9
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 1.7e-09 67.0 152 34.2
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 2.2e-09 66.6 166 31.9
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 2.2e-09 66.6 159 34.6
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 2.9e-09 66.2 109 40.4
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 2.9e-09 66.2 139 37.4
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 2.9e-09 66.2 166 31.9
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 3.8e-09 65.9 171 32.7
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 3.8e-09 65.9 156 33.3
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 3.8e-09 65.9 165 33.9
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 5.0e-09 65.5 166 31.9
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 6.5e-09 65.1 107 41.1
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 8.5e-09 64.7 166 31.9
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 1.1e-08 64.3 167 32.3
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 1.5e-08 63.9 159 35.2
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 1.5e-08 63.9 159 34.6
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 1.9e-08 63.5 167 34.7
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.9e-08 63.5 159 34.0
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 2.5e-08 63.2 161 35.4
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 2.5e-08 63.2 160 30.6
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 3.2e-08 62.8 166 34.3
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 3.2e-08 62.8 167 34.1
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 3.2e-08 62.8 127 36.2
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 4.2e-08 62.4 139 34.5
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 4.2e-08 62.4 167 32.9
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 7.2e-08 61.6 167 32.9
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 7.2e-08 61.6 166 31.3
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 7.2e-08 61.6 160 31.2
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 7.2e-08 61.6 160 31.2
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 9.4e-08 61.2 161 33.5
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 9.4e-08 61.2 146 31.5
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 9.4e-08 61.2 167 31.7
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 9.4e-08 61.2 164 31.1
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 1.2e-07 60.8 114 38.6
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.1e-07 60.1 167 30.5
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 2.1e-07 60.1 167 31.1
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 2.7e-07 59.7 146 30.8
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 2.7e-07 59.7 151 31.1
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 2.7e-07 59.7 151 31.1
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 2.7e-07 59.7 160 34.4
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 3.6e-07 59.3 97 41.2
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 3.6e-07 59.3 158 32.9
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 4.7e-07 58.9 101 41.6
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 6.1e-07 58.5 99 43.4
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 8.0e-07 58.2 161 31.1
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 1.0e-06 57.8 159 34.0
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.0e-06 57.8 167 31.7
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 1.0e-06 57.8 152 32.2
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 1.4e-06 57.4 101 36.6
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 2.3e-06 56.6 102 37.3
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 2.3e-06 56.6 101 35.6
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 2.3e-06 56.6 107 36.4
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.0e-06 56.2 164 32.3
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 3.0e-06 56.2 164 32.3
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 3.0e-06 56.2 95 41.1
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 4.0e-06 55.8 112 35.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 4.0e-06 55.8 103 36.9
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 5.2e-06 55.5 107 36.4
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 6.7e-06 55.1 103 37.9
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 6.7e-06 55.1 105 37.1
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 6.7e-06 55.1 159 33.3
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 8.8e-06 54.7 100 36.0


User provided reference genes

Program Settings