Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g14276_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.7e-100 368.6 183 100.0
MBI04_g27135_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 3.0e-99 365.2 181 99.4
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.7e-81 306.2 169 91.1
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 8.6e-78 293.9 180 77.8
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 5.6e-77 291.2 183 76.0
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 5.6e-77 291.2 181 76.8
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 7.3e-77 290.8 183 76.0
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 1.6e-76 289.7 183 77.6
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 2.1e-76 289.3 183 76.5
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 2.8e-76 288.9 183 77.6
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 6.1e-76 287.7 183 77.0
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 6.1e-76 287.7 183 75.4
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 6.1e-76 287.7 183 76.0
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 8.9e-75 283.9 183 73.8
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 1.2e-74 283.5 182 73.6
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 2.0e-74 282.7 183 73.8
CSS0011782 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 3.4e-74 282.0 180 76.1
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 5.8e-74 281.2 180 73.9
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 7.5e-74 280.8 183 73.2
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 9.8e-74 280.4 180 73.9
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.2e-73 279.3 181 73.5
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 2.9e-73 278.9 183 74.9
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 3.7e-73 278.5 182 73.6
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 1.4e-72 276.6 181 72.4
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.2e-72 275.4 181 72.4
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 4.1e-72 275.0 183 73.2
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 7.0e-72 274.2 181 71.8
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 9.2e-72 273.9 183 72.7
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 9.2e-72 273.9 183 72.7
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 1.2e-71 273.5 180 71.7
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.0e-71 272.7 180 72.8
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 2.0e-71 272.7 182 73.1
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 2.7e-71 272.3 179 71.5
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.7e-71 272.3 183 72.1
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 3.5e-71 271.9 183 72.7
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 3.5e-71 271.9 183 72.7
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 3.5e-71 271.9 183 72.1
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 4.6e-71 271.6 183 71.6
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 4.6e-71 271.6 184 71.7
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 1.0e-70 270.4 183 73.2
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 1.7e-70 269.6 183 72.1
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 2.3e-70 269.2 183 71.0
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 3.0e-70 268.9 183 70.5
Lju1319A3T40 Lonicera japonica HOM05D002816 ORTHO05D005633 1.9e-69 266.2 177 72.3
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 3.3e-69 265.4 184 72.3
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 7.3e-69 264.2 183 68.3
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 9.5e-69 263.8 177 70.6
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 1.1e-67 260.4 179 68.7
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 3.1e-67 258.8 172 71.5
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 7.5e-66 254.2 180 64.4
Actinidia39381 Actinidia chinensis HOM05D002816 ORTHO05D005633 2.2e-65 252.7 162 77.8
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 4.9e-65 251.5 171 70.2
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 6.4e-65 251.1 183 67.8
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 8.3e-65 250.8 183 66.1
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 8.3e-65 250.8 163 74.8
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 1.1e-64 250.4 175 65.7
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 1.9e-64 249.6 183 66.7
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 3.2e-64 248.8 185 66.5
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 9.2e-64 247.3 181 68.5
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 1.2e-63 246.9 175 70.9
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 1.6e-63 246.5 179 67.6
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 3.5e-63 245.4 180 65.0
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 4.6e-63 245.0 185 65.9
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 7.8e-63 244.2 183 65.6
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 7.8e-63 244.2 181 64.6
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 1.0e-62 243.8 175 64.6
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 1.3e-62 243.4 181 66.9
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.3e-62 243.4 182 65.9
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 1.7e-62 243.0 183 65.0
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 3.0e-62 242.3 183 64.5
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 3.9e-62 241.9 181 66.9
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 3.9e-62 241.9 180 65.0
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 6.6e-62 241.1 181 62.4
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 6.6e-62 241.1 184 63.6
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 1.9e-61 239.6 174 64.4
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 2.5e-61 239.2 183 64.5
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 4.3e-61 238.4 182 64.3
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 4.3e-61 238.4 183 62.8
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 7.3e-61 237.7 185 63.2
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 9.5e-61 237.3 172 64.5
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 2.1e-60 236.1 171 67.3
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 2.8e-60 235.7 179 63.7
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 2.8e-60 235.7 181 65.2
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 3.6e-60 235.3 176 63.6
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 3.6e-60 235.3 178 65.2
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 3.6e-60 235.3 183 62.3
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 4.7e-60 235.0 183 63.4
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 8.1e-60 234.2 176 65.3
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 2.3e-59 232.6 182 61.0
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 3.1e-59 232.3 186 60.8
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 6.8e-59 231.1 186 60.8
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 2.6e-58 229.2 176 64.2
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 7.5e-58 227.6 183 63.9
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 9.9e-58 227.3 183 63.9
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 2.2e-57 226.1 176 59.7
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 2.7e-55 219.2 182 61.0
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 1.0e-54 217.2 175 57.7
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 5.1e-54 214.9 163 65.0
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 4.3e-53 211.8 164 61.6
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 5.6e-53 211.5 150 66.7
Lj1C364T9 Lonicera japonica HOM05D002816 ORTHO05D005633 3.1e-51 205.7 129 78.3
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.6e-47 191.8 168 55.4
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.3e-45 185.3 166 51.2
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.3e-45 185.3 166 51.2
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.9e-41 171.8 170 50.6
SEGI_37312 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.5e-34 148.7 131 48.1
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 6.2e-28 128.3 169 37.3
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 1.1e-27 127.5 169 39.1
Psat7g121000 Pisum sativum HOM05D002816 ORTHO05D005633 2.9e-25 119.4 119 49.6
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 1.2e-23 114.0 170 36.5
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 1.6e-23 113.6 170 35.9
Psat6g019120 Pisum sativum HOM05D002816 ORTHO05D005633 2.5e-16 89.7 73 54.8
Actinidia06323 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.3e-14 84.0 75 53.3
PSO339G1112 Papaver somniferum HOM05D002816 ORTHO05D005633 1.2e-07 60.8 81 45.7


User provided reference genes

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