Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 9.8e-149 530.0 252 100.0
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 3.5e-61 239.2 148 76.4
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 3.8e-60 235.7 154 72.7
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 3.8e-60 235.7 145 73.1
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 1.9e-59 233.4 150 71.3
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.9e-59 233.4 143 73.4
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.5e-59 233.0 145 71.7
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 3.2e-59 232.6 173 62.4
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 3.2e-59 232.6 151 69.5
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 7.2e-59 231.5 145 73.1
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 7.2e-59 231.5 143 75.5
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 1.2e-58 230.7 145 72.4
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 1.6e-58 230.3 147 72.1
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.1e-58 229.9 143 75.5
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.1e-58 229.9 143 75.5
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.1e-58 229.9 183 60.7
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 2.7e-58 229.6 142 74.6
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 2.7e-58 229.6 144 73.6
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 4.7e-58 228.8 143 72.7
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 4.7e-58 228.8 147 71.4
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 4.7e-58 228.8 145 71.7
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 6.1e-58 228.4 145 71.0
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 8.0e-58 228.0 144 72.2
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 8.0e-58 228.0 143 70.6
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 1.0e-57 227.6 140 73.6
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 1.4e-57 227.3 147 69.4
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.4e-57 227.3 140 72.9
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.4e-57 227.3 155 67.7
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 1.8e-57 226.9 145 71.7
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 1.8e-57 226.9 143 72.0
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 2.3e-57 226.5 143 70.6
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 2.3e-57 226.5 143 72.7
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 3.0e-57 226.1 153 68.6
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 3.0e-57 226.1 142 71.8
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 3.9e-57 225.7 151 66.2
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 3.9e-57 225.7 144 72.2
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 5.2e-57 225.3 145 71.0
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 6.7e-57 224.9 143 72.7
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 6.7e-57 224.9 143 72.7
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 6.7e-57 224.9 145 71.0
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 8.8e-57 224.6 145 70.3
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.1e-56 224.2 143 72.7
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 1.5e-56 223.8 145 67.6
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.5e-56 223.8 141 72.3
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 1.5e-56 223.8 145 69.7
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.6e-56 223.0 155 67.7
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 4.4e-56 222.2 151 68.2
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 4.4e-56 222.2 145 72.4
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 5.7e-56 221.9 149 69.8
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 5.7e-56 221.9 143 70.6
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 9.7e-56 221.1 145 66.9
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 1.3e-55 220.7 145 65.5
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.3e-55 220.7 143 69.2
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.3e-55 220.7 155 67.1
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 1.7e-55 220.3 143 69.9
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 2.2e-55 219.9 143 69.9
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 2.2e-55 219.9 143 69.9
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 2.2e-55 219.9 145 69.0
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 2.8e-55 219.5 138 72.5
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 2.8e-55 219.5 140 70.0
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 4.8e-55 218.8 143 68.5
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 4.8e-55 218.8 143 67.8
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 4.8e-55 218.8 143 67.8
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 6.3e-55 218.4 142 69.7
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.3e-55 218.4 139 75.5
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 6.3e-55 218.4 150 66.7
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 1.1e-54 217.6 143 67.1
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 1.1e-54 217.6 144 68.1
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 1.4e-54 217.2 143 68.5
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.8e-54 216.9 142 69.7
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.8e-54 216.9 143 68.5
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 1.8e-54 216.9 143 67.8
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.8e-54 216.9 138 71.7
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 1.8e-54 216.9 138 69.6
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 2.4e-54 216.5 143 70.6
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 2.4e-54 216.5 149 66.4
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 3.1e-54 216.1 138 71.0
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 5.3e-54 215.3 147 65.3
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 7.0e-54 214.9 143 68.5
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 9.1e-54 214.5 143 67.1
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 9.1e-54 214.5 139 69.8
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.2e-53 214.2 147 65.3
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 1.6e-53 213.8 143 66.4
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.0e-53 213.4 147 65.3
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 2.6e-53 213.0 149 63.8
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.5e-53 212.6 147 64.6
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 3.5e-53 212.6 145 66.9
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 4.5e-53 212.2 145 67.6
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 4.5e-53 212.2 150 64.0
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 5.9e-53 211.8 142 65.5
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.0e-52 211.1 140 66.4
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.3e-52 210.7 143 68.5
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 1.3e-52 210.7 139 68.3
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.2e-52 209.9 147 67.3
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 2.2e-52 209.9 147 63.9
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 2.2e-52 209.9 143 65.0
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 3.8e-52 209.1 141 66.0
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 3.8e-52 209.1 145 67.6
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 5.0e-52 208.8 141 66.0
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.9e-51 206.8 148 66.2
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 1.9e-51 206.8 144 63.2
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 3.2e-51 206.1 141 63.8
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 3.2e-51 206.1 145 64.8
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 4.2e-51 205.7 141 63.8
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 5.5e-51 205.3 144 63.2
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 7.2e-51 204.9 144 63.2
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 7.2e-51 204.9 144 63.2
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 1.2e-50 204.1 141 63.1
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 1.8e-49 200.3 144 61.1
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 5.2e-49 198.7 144 60.4
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 5.2e-49 198.7 119 73.9
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 2.7e-45 186.4 118 72.9
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 3.5e-45 186.0 141 61.7
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 2.1e-42 176.8 163 51.5
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 8.8e-41 171.4 113 69.0
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.2e-40 171.0 128 60.9
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 1.2e-40 171.0 152 52.6
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.5e-40 170.6 141 53.9
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 3.7e-39 166.0 154 53.9
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.0e-36 157.9 128 57.0
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 3.3e-35 152.9 93 72.0
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 2.8e-34 149.8 141 52.5
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 6.1e-34 148.7 103 66.0
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 1.8e-33 147.1 132 56.1
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 5.7e-32 142.1 100 64.0
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.3e-31 141.0 108 62.0
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 4.1e-30 136.0 138 48.6
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 5.4e-30 135.6 140 48.6
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 5.0e-28 129.0 138 50.0
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 9.8e-24 114.8 145 42.8
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 1.4e-22 110.9 85 61.2
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 1.2e-21 107.8 155 37.4
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 1.2e-21 107.8 90 54.4
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.1e-19 101.3 83 55.4


User provided reference genes

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