Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 0.0e+00 1146.3 642 100.0
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.8e-159 567.0 641 56.6
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 6.8e-154 548.5 638 54.2
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.1e-140 504.6 636 51.6
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.6e-139 500.7 623 50.9
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 6.2e-139 498.8 631 51.0
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.8e-138 497.3 634 49.2
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 2.3e-138 496.9 626 50.5
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 5.2e-138 495.7 651 47.5
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 8.9e-138 495.0 636 51.3
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 2.0e-137 493.8 635 50.7
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 6.4e-136 488.8 634 49.2
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 5.4e-135 485.7 628 50.2
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 7.0e-135 485.3 633 52.4
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.6e-134 484.2 635 50.1
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.6e-134 482.6 629 49.3
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.0e-134 482.3 635 47.4
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.0e-133 481.5 636 49.8
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 3.0e-133 479.9 644 49.7
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 3.0e-133 479.9 630 51.9
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.5e-132 476.9 628 51.1
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.6e-131 474.2 628 48.4
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.6e-131 473.0 630 50.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 3.6e-131 473.0 645 48.4
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 1.4e-130 471.1 632 51.1
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 2.3e-130 470.3 633 47.4
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 2.3e-130 470.3 637 48.4
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 3.1e-130 469.9 644 48.4
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 8.9e-130 468.4 631 49.9
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 3.4e-129 466.5 637 48.7
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 1.7e-128 464.2 631 48.7
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 8.3e-128 461.8 659 45.2
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.3e-128 461.8 632 50.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 4.1e-127 459.5 632 50.5
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.7e-126 456.8 632 50.3
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.8e-126 455.3 660 48.3
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.7e-125 454.1 639 47.6
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.9e-124 450.7 653 45.6
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 1.9e-124 450.7 660 46.4
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 5.6e-124 449.1 622 46.6
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 2.1e-123 447.2 637 46.5
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 1.1e-122 444.9 604 48.5
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 1.8e-122 444.1 633 45.3
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 2.4e-122 443.7 627 46.4
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 4.0e-122 443.0 630 46.2
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-121 440.3 632 45.7
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 4.4e-121 439.5 630 46.0
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 5.8e-121 439.1 629 46.6
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 7.6e-121 438.7 614 48.4
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.3e-120 438.0 632 45.1
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 6.0e-118 429.1 642 47.4
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.0e-117 428.3 674 46.7
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.7e-117 427.6 577 49.4
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 5.1e-117 426.0 629 47.5
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 6.6e-117 425.6 569 51.8
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.9e-116 424.1 635 46.9
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 3.3e-116 423.3 653 45.8
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 4.0e-114 416.4 549 48.8
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 4.0e-114 416.4 612 45.8
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 5.2e-114 416.0 686 43.9
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 6.9e-114 415.6 638 47.0
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.0e-113 414.1 633 42.3
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 4.4e-113 412.9 612 44.1
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 5.8e-113 412.5 645 44.3
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 2.2e-112 410.6 626 44.4
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 6.4e-112 409.1 636 45.0
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 1.1e-111 408.3 619 46.0
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.3e-109 400.6 635 43.8
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 3.9e-109 399.8 645 46.2
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 5.1e-109 399.4 641 43.2
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.6e-107 394.4 621 44.9
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 3.6e-107 393.3 469 52.2
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 1.6e-102 377.9 559 45.6
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.0e-101 375.2 675 38.7
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 5.3e-98 362.8 651 39.9
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 4.5e-97 359.8 637 41.9
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 2.9e-96 357.1 618 43.4
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 4.9e-96 356.3 635 39.8
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 7.1e-95 352.4 641 41.2
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 2.7e-94 350.5 629 42.0
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.0e-93 348.6 616 44.5
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.1e-92 345.1 617 43.8
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.5e-92 344.7 626 43.8
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 2.5e-92 344.0 638 38.6
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 1.6e-91 341.3 480 50.2
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 3.1e-90 337.0 626 42.7
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 5.3e-90 336.3 650 38.3
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 2.6e-89 334.0 317 54.9
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 7.6e-89 332.4 616 43.5
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 1.7e-88 331.3 299 56.2
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 4.9e-88 329.7 346 52.0
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 4.3e-84 316.6 559 42.0
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 5.7e-84 316.2 636 39.0
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 6.3e-83 312.8 319 54.2
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.8e-82 311.2 627 38.0
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 3.1e-82 310.5 568 41.9
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 2.9e-80 303.9 455 45.9
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.1e-79 302.0 622 37.8
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 1.8e-77 294.7 459 49.7
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 3.0e-77 293.9 543 38.5
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 9.7e-76 288.9 254 57.9
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.4e-74 285.0 534 40.4
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.3e-72 278.5 258 55.8
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 3.0e-69 267.3 231 60.2
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.5e-68 265.0 604 34.3
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 5.3e-66 256.5 253 55.3
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 9.1e-66 255.8 611 37.3
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 3.2e-63 247.3 216 58.8
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 3.9e-61 240.4 303 47.9
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.4e-60 236.9 235 53.2
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 1.6e-57 228.4 708 33.5
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 5.5e-55 219.9 632 30.1
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 2.7e-54 217.6 172 62.2
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.5e-52 211.8 464 40.1
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 9.1e-50 202.6 366 44.5
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.2e-49 202.2 599 29.5
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 1.7e-48 198.4 274 44.9
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.8e-48 197.2 243 46.5
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 6.1e-46 189.9 207 51.7
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 9.1e-42 176.0 252 44.8
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.8e-40 170.6 409 37.2
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 1.1e-39 169.1 170 49.4
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.9e-39 168.3 148 60.1
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 7.2e-39 166.4 238 44.5
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 1.6e-33 148.7 169 42.0
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.5e-33 147.1 400 38.5
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.7e-32 145.2 451 33.3
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.5e-31 142.1 242 38.4
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 3.3e-31 141.0 122 55.7
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 4.3e-31 140.6 284 41.5
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 4.7e-30 137.1 120 55.0
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.5e-28 132.1 228 38.2
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.0e-24 119.4 183 40.4
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 2.3e-24 118.2 204 37.3
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 2.3e-24 118.2 327 28.1
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 3.0e-24 117.9 149 47.0
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 5.0e-24 117.1 264 31.1
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 8.6e-24 116.3 171 47.4
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.5e-23 114.8 92 65.2
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.8e-22 111.3 89 57.3
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 6.2e-22 110.2 140 48.6
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 3.1e-21 107.8 506 28.1
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.2e-19 101.7 121 46.3
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 6.4e-19 100.1 180 38.3
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 2.4e-18 98.2 195 38.5
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 4.6e-17 94.0 219 36.1
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 1.0e-16 92.8 291 30.6
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 6.6e-16 90.1 248 31.0
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 1.1e-15 89.4 83 50.6
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-15 88.2 199 36.2
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 4.3e-15 87.4 157 35.7
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 7.3e-15 86.7 213 34.3
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 1.2e-14 85.9 167 37.1
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-14 85.5 195 31.8
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 6.2e-14 83.6 183 31.1
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 6.2e-14 83.6 183 31.1
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 1.8e-13 82.0 62 67.7
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.5e-12 79.0 82 50.0
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.6e-12 78.2 113 42.5
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 5.8e-12 77.0 182 30.2
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 9.9e-12 76.3 82 46.3
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 3.2e-10 71.2 150 37.3
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.1e-10 70.9 143 39.2
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 5.4e-10 70.5 139 39.6
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 9.2e-10 69.7 69 53.6
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-09 68.9 251 32.7
Solyc04g026000.2 Solanum lycopersicum HOM05D003570 ORTHO05D004207 2.1e-09 68.6 129 33.3
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 3.9e-08 64.3 78 50.0
QL93p0107_0801 Quercus lobata HOM05D003570 ORTHO05D004207 1.5e-07 62.4 150 36.0
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 5.6e-07 60.5 115 32.2
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 9.5e-07 59.7 59 52.5


User provided reference genes

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