Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g13622_MAGBIO Magnolia biondii HOM05D005524 ORTHO05D005392 1.7e-154 549.7 366 100.0
MBI01_g27620_MAGBIO Magnolia biondii HOM05D005524 ORTHO05D005392 6.2e-27 125.9 206 45.6
MBI04_g13621_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-22 111.7 70 87.1
MBI01_g27621_MAGBIO Magnolia biondii HOM05D020325 ORTHO05D005392 3.4e-09 67.0 77 51.9
Dinv18091 Davidia involucrata HOM05D005524 ORTHO05D005392 3.8e-08 63.5 62 58.1
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 3.2e-07 60.5 61 59.0
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 3.2e-07 60.5 61 59.0
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 3.2e-07 60.5 61 59.0
AT2G41905 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 62.3
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 4.2e-07 60.1 61 59.0
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 5.4e-07 59.7 61 59.0
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 5.4e-07 59.7 61 59.0
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 5.4e-07 59.7 61 59.0
TAR376G0022 Trochodendron aralioides HOM05D058790 ORTHO05D051502 5.4e-07 59.7 66 54.5
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 7.1e-07 59.3 61 59.0
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 7.1e-07 59.3 61 57.4
CsaV3_3G032220 Cucumis sativus L. HOM05D005524 ORTHO05D005392 7.1e-07 59.3 61 57.4
Duzib093G2098 Durio zibethinus HOM05D005524 ORTHO05D005392 7.1e-07 59.3 61 59.0
Duzib106G1083 Durio zibethinus HOM05D005524 ORTHO05D005392 9.3e-07 58.9 61 59.0
Potri.016G052001 Populus trichocarpa HOM05D005524 ORTHO05D005392 9.3e-07 58.9 62 54.8
AL4G40250 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 1.2e-06 58.5 61 59.0
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-06 58.5 61 55.7
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-06 58.5 61 57.4
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-06 58.5 61 55.7
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 1.2e-06 58.5 61 55.7
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 1.2e-06 58.5 61 57.4
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 1.6e-06 58.2 61 57.4
CARHR137000 Cardamine hirsuta HOM05D005524 ORTHO05D005392 2.1e-06 57.8 61 60.7
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 2.1e-06 57.8 61 55.7
Duzib128G1940 Durio zibethinus HOM05D005524 ORTHO05D005392 2.1e-06 57.8 62 58.1
Eucgr.A02403 Eucalyptus grandis HOM05D005524 ORTHO05D005392 2.1e-06 57.8 64 54.7
BcaNung07196 Brassica carinata HOM05D005524 ORTHO05D005392 3.5e-06 57.0 61 59.0
Sp4g24180 Schrenkiella parvula HOM05D005524 ORTHO05D005392 3.5e-06 57.0 61 59.0
Sed0016248 Sechium edule HOM05D005524 ORTHO05D005392 3.5e-06 57.0 61 52.5
BcaB06g29217 Brassica carinata HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 57.4
BcaC02g07275 Brassica carinata HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 59.0
A04p31910 Brassica napus HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 59.0
C04p69380 Brassica napus HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 59.0
BolC4t28440H Brassica oleracea HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 59.0
BraA04t18649Z Brassica rapa HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 59.0
Carub.0004s2422 Capsella rubella HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 57.4
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 4.6e-06 56.6 61 52.5


User provided reference genes

Program Settings