Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 2.0e-259 898.7 470 100.0
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 8.8e-244 846.7 470 93.0
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 2.0e-240 835.5 469 93.2
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 2.7e-240 835.1 470 92.3
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 1.7e-239 832.4 470 91.3
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 3.8e-239 831.2 470 91.1
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 5.5e-238 827.4 470 90.4
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 2.1e-237 825.5 470 90.2
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 6.1e-237 823.9 470 89.8
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 1.0e-236 823.2 470 90.0
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 1.4e-236 822.8 470 90.9
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 8.8e-236 820.1 470 90.6
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 1.2e-235 819.7 470 90.0
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.5e-235 819.3 470 90.4
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 2.0e-235 818.9 470 88.9
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 3.4e-235 818.1 470 88.7
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 9.8e-235 816.6 470 89.6
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 1.3e-234 816.2 470 90.0
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 1.7e-234 815.8 470 89.1
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 1.7e-234 815.8 470 90.2
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 3.7e-234 814.7 470 90.0
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 4.8e-234 814.3 470 89.1
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 6.3e-234 813.9 470 88.5
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 6.3e-234 813.9 470 88.5
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 6.3e-234 813.9 507 84.8
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 2.4e-233 812.0 470 87.7
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 5.4e-233 810.8 470 88.7
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 5.4e-233 810.8 472 88.3
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 5.4e-233 810.8 470 88.5
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.2e-232 809.7 471 88.7
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.6e-232 809.3 470 87.9
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 2.0e-232 808.9 470 88.5
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 2.0e-232 808.9 470 89.1
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 3.5e-232 808.1 470 88.3
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 4.5e-232 807.7 469 89.1
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 5.9e-232 807.4 470 88.9
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 6.5e-231 803.9 470 87.9
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 6.5e-231 803.9 470 87.9
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 1.1e-230 803.1 471 87.5
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 1.5e-230 802.7 470 87.7
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 1.5e-230 802.7 469 88.1
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 1.9e-230 802.4 471 87.5
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 2.5e-230 802.0 470 88.5
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 1.2e-229 799.7 470 87.7
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 4.7e-229 797.7 470 88.3
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 8.0e-229 797.0 471 86.6
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 8.0e-229 797.0 469 88.3
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 4.0e-228 794.7 507 82.6
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 5.2e-228 794.3 470 87.4
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 6.8e-228 793.9 470 88.9
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 2.6e-227 792.0 494 84.0
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 5.7e-227 790.8 464 88.1
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 5.7e-227 790.8 470 87.2
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 1.7e-226 789.3 470 86.4
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 1.1e-225 786.6 469 87.2
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 1.0e-223 780.0 470 86.6
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 5.6e-222 774.2 470 86.0
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 1.2e-219 766.5 450 88.4
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 4.4e-219 764.6 470 84.0
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 4.4e-219 764.6 470 84.7
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 5.8e-219 764.2 470 84.0
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 7.5e-219 763.8 470 84.0
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 1.3e-218 763.1 470 83.6
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 2.9e-218 761.9 470 84.0
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 4.9e-218 761.1 470 83.6
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 6.4e-218 760.8 546 75.6
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 6.4e-218 760.8 471 84.7
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 3.2e-217 758.4 470 83.2
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 4.1e-217 758.1 470 83.4
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 9.2e-217 756.9 470 83.2
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 1.2e-216 756.5 470 83.2
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 1.6e-216 756.1 470 83.6
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 2.0e-216 755.7 470 83.2
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 2.0e-216 755.7 470 83.2
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 6.0e-216 754.2 470 83.0
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 6.0e-216 754.2 470 83.8
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 7.8e-216 753.8 471 83.2
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 7.8e-216 753.8 471 83.2
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 7.8e-216 753.8 470 84.0
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 1.0e-215 753.4 470 83.4
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 4.3e-214 748.0 472 82.8
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 3.6e-213 745.0 494 79.4
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 3.6e-213 745.0 492 80.1
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 6.2e-213 744.2 471 83.4
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 2.6e-211 738.8 498 78.3
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 3.4e-211 738.4 442 86.0
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 9.8e-211 736.9 493 78.9
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 3.4e-203 711.8 419 87.8
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 9.9e-203 710.3 471 81.3
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 2.1e-200 702.6 398 91.0
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.9e-198 696.0 419 86.9
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 7.3e-198 694.1 419 85.9
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 7.3e-198 694.1 419 85.9
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 8.7e-191 670.6 462 77.7
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 4.3e-190 668.3 470 77.7
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 4.7e-189 664.8 384 90.9
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 6.2e-189 664.5 424 82.1
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 1.1e-188 663.7 470 71.5
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 5.1e-175 618.2 373 85.0
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 1.7e-170 603.2 350 87.4
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 3.8e-170 602.1 467 66.2
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 3.2e-169 599.0 341 92.7
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 7.1e-169 597.8 470 71.3
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 1.2e-168 597.0 374 82.6
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 1.4e-164 583.6 470 62.8
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 2.0e-163 579.7 391 81.1
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 1.3e-159 567.0 324 93.8
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 1.3e-141 507.3 312 81.4
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 9.4e-137 491.1 365 71.2
Actinidia34332 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.2e-136 490.7 309 86.1
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.9e-129 466.8 324 79.0
PGSC0003DMG401017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 4.7e-112 409.1 247 88.3
COL.COLO4_15139 Corchorus olitorius HOM05D005039 ORTHO05D006145 3.5e-91 339.7 311 63.7
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 3.6e-88 329.7 182 85.7
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.4e-87 327.8 173 90.2
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 8.9e-87 325.1 238 73.9
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.2e-80 304.7 303 56.8
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 5.2e-79 299.3 506 37.4
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.3e-74 284.6 210 61.4
AagrBONN_evm.TU.Sc2ySwM_369.410 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.8e-71 274.2 295 54.9
BcaC03g14670 Brassica carinata HOM05D005039 ORTHO05D006145 1.2e-67 261.5 161 87.0
EL10Ac3g05835 Beta vulgaris HOM05D005039 ORTHO05D006145 3.5e-59 233.4 195 70.3
BcaB05g24073 Brassica carinata HOM05D005039 ORTHO05D006145 6.7e-58 229.2 141 87.2
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 6.2e-56 222.6 408 39.5
Cc02_g00110 Coffea canephora HOM05D005039 ORTHO05D006145 1.4e-52 211.5 120 93.3
MCO06G137 Micromonas commoda HOM05D005039 ORTHO05D006145 1.8e-47 194.5 336 37.5
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 3.1e-47 193.7 491 29.9
SEGI_13634 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 4.0e-47 193.4 105 86.7
CDE11G0023 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.0e-45 188.7 107 81.3
SEGI_29432 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 2.2e-45 187.6 112 87.5
Cpa.g.sc43.133 Carica papaya HOM05D005039 ORTHO05D006145 1.9e-44 184.5 111 88.3
CSS0027952 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 3.8e-37 160.2 92 90.2
CSS0015728 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 6.3e-32 142.9 76 93.4
Cpa.g.sc43.132 Carica papaya HOM05D005039 ORTHO05D006145 2.5e-28 131.0 74 87.8
Carub.0008s0531 Capsella rubella HOM05D005039 ORTHO05D006145 2.7e-27 127.5 81 81.5
COL.COLO4_15138 Corchorus olitorius HOM05D005039 ORTHO05D006145 2.7e-27 127.5 72 83.3
CSS0031224 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 6.1e-27 126.3 74 79.7
Cpa.g.sc43.136 Carica papaya HOM05D005039 ORTHO05D006145 1.1e-25 122.1 72 80.6
ClCG09G017320 Citrullus lanatus HOM05D005039 ORTHO05D006145 7.4e-25 119.4 72 77.8
Oeu028985.2 Olea europaea HOM05D005039 ORTHO05D006145 4.8e-24 116.7 99 65.7
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-22 111.7 79 69.6
Solyc07g045270.2 Solanum lycopersicum HOM05D005039 ORTHO05D006145 7.7e-22 109.4 57 86.0
SEGI_05893 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 6.5e-21 106.3 57 87.7
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 1.8e-15 88.2 57 84.2
Carub.0008s0533 Capsella rubella HOM05D005039 ORTHO05D006145 5.3e-15 86.7 51 86.3
GSVIVG01028619001 Vitis vinifera HOM05D005039 ORTHO05D048867 1.2e-14 85.5 74 63.5
EL10Ac7g16242 Beta vulgaris HOM05D005039 ORTHO05D006145 2.5e-12 77.8 44 88.6
Potri.019G042201 Populus trichocarpa HOM05D005039 ORTHO05D006145 5.5e-12 76.6 53 83.0
MD01G1239000 Malus domestica HOM05D005039 ORTHO05D006145 9.4e-12 75.9 47 91.5
MD01G1239100 Malus domestica HOM05D005039 ORTHO05D006145 2.7e-06 57.8 33 87.9


User provided reference genes

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