Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 3.8e-255 884.8 609 100.0
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.5e-57 227.6 386 48.4
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 4.0e-55 220.3 377 48.3
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 3.8e-53 213.8 546 37.0
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 7.6e-46 189.5 362 44.5
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 1.5e-38 165.2 406 36.0
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 1.0e-34 152.5 261 44.8
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 1.3e-34 152.1 381 37.5
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 8.1e-32 142.9 409 34.5
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 1.1e-31 142.5 357 39.5
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 2.4e-31 141.4 455 34.5
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 6.9e-31 139.8 414 33.6
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 6.9e-31 139.8 338 37.9
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 9.0e-31 139.4 481 32.8
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 2.0e-30 138.3 394 35.3
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.3e-29 135.6 355 34.4
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 4.9e-29 133.7 331 38.7
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 2.4e-28 131.3 402 34.8
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 3.2e-28 131.0 387 35.7
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 3.9e-26 124.0 398 32.7
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 1.1e-25 122.5 342 33.6
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.3e-25 120.9 403 34.7
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 9.6e-25 119.4 344 33.4
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.8e-24 117.9 340 33.5
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 3.7e-24 117.5 349 35.2
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 4.8e-24 117.1 346 35.0
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.1e-23 115.9 340 33.2
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.4e-23 115.5 340 33.5
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 6.9e-23 113.2 340 32.9
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 1.5e-22 112.1 352 31.8
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 4.5e-22 110.5 334 34.1
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 2.2e-21 108.2 320 33.4
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.9e-21 107.8 338 32.2
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 3.8e-21 107.5 466 30.7
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 3.8e-21 107.5 331 33.5
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 9.3e-20 102.8 334 34.7
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 2.7e-19 101.3 192 33.9
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 6.0e-19 100.1 332 32.8
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 6.0e-19 100.1 317 35.6
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 2.3e-18 98.2 243 34.6
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 2.3e-18 98.2 328 32.9
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 6.7e-18 96.7 328 33.2
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 8.7e-18 96.3 300 31.0
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 8.7e-18 96.3 202 35.6
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 8.7e-18 96.3 315 32.1
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 1.5e-17 95.5 204 34.8
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 1.9e-17 95.1 301 32.6
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 2.5e-17 94.7 204 35.3
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 2.5e-17 94.7 361 31.0
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 3.3e-17 94.4 333 31.2
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 5.7e-17 93.6 386 31.1
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 7.4e-17 93.2 290 30.7
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 9.7e-17 92.8 209 36.8
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 1.6e-16 92.0 219 34.2
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 1.6e-16 92.0 294 31.0
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 2.2e-16 91.7 335 32.5
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 1.1e-15 89.4 383 30.5
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.4e-15 89.0 218 34.9
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 2.4e-15 88.2 406 31.3
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 1.2e-14 85.9 201 34.3
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 1.2e-14 85.9 199 34.7
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 2.0e-14 85.1 183 33.3
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 2.0e-14 85.1 307 29.6
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 3.4e-14 84.3 402 30.3
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 3.4e-14 84.3 348 33.0
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 4.5e-14 84.0 323 31.0
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 5.9e-14 83.6 189 34.4
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 7.6e-14 83.2 228 32.0
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 1.0e-13 82.8 400 33.0
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 1.7e-13 82.0 368 28.0
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 2.9e-13 81.3 357 28.6
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 5.0e-13 80.5 317 30.6
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 5.0e-13 80.5 327 27.8
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 8.5e-13 79.7 217 30.9
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 2.5e-12 78.2 360 30.0
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 5.5e-12 77.0 322 29.2
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 2.1e-11 75.1 185 33.5
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 2.7e-11 74.7 315 29.2
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 3.6e-11 74.3 347 28.0
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 3.6e-11 74.3 322 28.0
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 1.8e-10 72.0 310 28.1
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 1.8e-10 72.0 333 27.0
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.3e-10 71.6 182 26.4
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 3.0e-10 71.2 315 29.8
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 3.0e-10 71.2 309 31.1
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 6.7e-10 70.1 315 28.3
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 6.7e-10 70.1 323 27.6
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 8.8e-10 69.7 182 28.0
CiPaw.04G057500 Carya illinoinensis HOM05D005220 ORTHO05D006082 1.5e-09 68.9 180 27.8
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 1.5e-09 68.9 194 34.0
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.9e-09 68.6 327 27.2
TWI34G1812 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 2.5e-09 68.2 179 30.2
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.3e-09 67.8 179 29.1
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 4.3e-09 67.4 206 27.2
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 4.3e-09 67.4 180 27.2
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 4.3e-09 67.4 319 27.3
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 4.3e-09 67.4 203 30.0
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 7.4e-09 66.6 322 26.7
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 7.4e-09 66.6 179 29.1
Lju41C5T5 Lonicera japonica HOM05D005220 ORTHO05D006082 7.4e-09 66.6 190 28.4
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 7.4e-09 66.6 453 26.7
MBI16_g09907_MAGBIO Magnolia biondii HOM05D005220 ORTHO05D006082 1.3e-08 65.9 179 30.2
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 1.7e-08 65.5 389 28.0
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 1.7e-08 65.5 203 32.5
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 2.2e-08 65.1 379 27.2
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 2.2e-08 65.1 339 26.5
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 2.8e-08 64.7 332 25.6
Sc10g0003210 Simmondsia chinensis HOM05D005220 ORTHO05D006082 2.8e-08 64.7 178 25.3
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 3.7e-08 64.3 180 27.8
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 3.7e-08 64.3 188 28.7
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 3.7e-08 64.3 188 28.7
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 3.7e-08 64.3 201 29.9
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 3.7e-08 64.3 399 30.8
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 3.7e-08 64.3 180 27.8
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 3.7e-08 64.3 187 25.1
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 6.3e-08 63.5 190 26.8
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 6.3e-08 63.5 197 30.5
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 6.3e-08 63.5 179 28.5
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 6.3e-08 63.5 191 28.3
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 8.2e-08 63.2 181 27.6
PSO478G1432 Papaver somniferum HOM05D005220 ORTHO05D006082 8.2e-08 63.2 183 30.1
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.4e-07 62.4 237 28.3
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 1.8e-07 62.0 196 29.6
PSO017G3052 Papaver somniferum HOM05D005220 ORTHO05D006082 1.8e-07 62.0 179 28.5
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 2.4e-07 61.6 179 29.6
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 3.1e-07 61.2 179 27.9
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 3.1e-07 61.2 303 27.1
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 3.1e-07 61.2 247 27.5
Actinidia07816 Actinidia chinensis HOM05D005220 ORTHO05D006082 4.1e-07 60.8 182 24.2
ATR0064G106 Amborella trichopoda HOM05D005220 ORTHO05D006082 4.1e-07 60.8 180 26.1
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 4.1e-07 60.8 195 27.2
Actinidia01983 Actinidia chinensis HOM05D005220 ORTHO05D006082 5.3e-07 60.5 182 27.5
Ciclev10020317m.g Citrus clementina HOM05D005220 ORTHO05D006082 5.3e-07 60.5 179 25.7
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 5.3e-07 60.5 332 25.3
Lj1g0008070 Lotus japonicus HOM05D005220 ORTHO05D006082 5.3e-07 60.5 192 25.0
vmacro05657 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 5.3e-07 60.5 183 26.8
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 6.9e-07 60.1 179 26.8
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 6.9e-07 60.1 190 29.5
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 6.9e-07 60.1 180 26.7
TWI60G0661 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 6.9e-07 60.1 179 28.5
vmacro18154 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 6.9e-07 60.1 184 26.1
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 6.9e-07 60.1 445 27.9
Haze_07684 Corylus avellana HOM05D005220 ORTHO05D006082 9.1e-07 59.7 181 27.6
PSO302G0007 Papaver somniferum HOM05D005220 ORTHO05D006082 9.1e-07 59.7 190 29.5
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 1.2e-06 59.3 183 27.9
Cfa007639 Carpinus fangiana HOM05D005220 ORTHO05D006082 1.5e-06 58.9 178 28.1
Haze_14458 Corylus avellana HOM05D005220 ORTHO05D006082 1.5e-06 58.9 178 27.5
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 1.5e-06 58.9 182 27.5
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 1.5e-06 58.9 349 26.1
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 1.5e-06 58.9 179 26.8
Rhsim10G0044300 Rhododendron simsii HOM05D005220 ORTHO05D006082 2.0e-06 58.5 183 27.9
Manes.01G098100 Manihot esculenta HOM05D005220 ORTHO05D006082 2.6e-06 58.2 179 29.1
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 3.4e-06 57.8 179 26.8
Eucgr.I01975 Eucalyptus grandis HOM05D005220 ORTHO05D006082 3.4e-06 57.8 179 26.8
Prupe.5G201200 Prunus persica HOM05D005220 ORTHO05D006082 3.4e-06 57.8 186 25.8
GSVIVG01007924001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.4e-06 57.8 179 24.0
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 4.5e-06 57.4 183 28.4
QL10p018718 Quercus lobata HOM05D005220 ORTHO05D006082 4.5e-06 57.4 186 24.7
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 5.9e-06 57.0 179 26.3
Cpa.g.sc94.10 Carica papaya HOM05D005220 ORTHO05D006082 7.7e-06 56.6 179 24.6
CsaV3_1G002740 Cucumis sativus L. HOM05D005220 ORTHO05D006082 7.7e-06 56.6 190 26.8


User provided reference genes

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