Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g09499_MAGBIO Magnolia biondii HOM05D004155 ORTHO05D004837 1.2e-141 506.5 263 100.0
TAR374G0401 Trochodendron aralioides HOM05D004155 ORTHO05D004837 2.7e-93 345.9 264 72.3
TAR374G0168 Trochodendron aralioides HOM05D004155 ORTHO05D004837 3.6e-93 345.5 264 72.3
Nn6g33959 Nelumbo nucifera HOM05D004155 ORTHO05D004837 1.1e-91 340.5 263 71.9
Aqoxy5G03883 Aquilegia oxysepala HOM05D004155 ORTHO05D004837 5.9e-88 328.2 265 69.4
GSVIVG01001328001 Vitis vinifera HOM05D004155 ORTHO05D004837 1.3e-87 327.0 264 69.7
Haze_07913 Corylus avellana HOM05D004155 ORTHO05D004837 2.9e-87 325.9 266 68.0
Potri.003G077000 Populus trichocarpa HOM05D004155 ORTHO05D004837 1.9e-86 323.2 263 68.8
TAR375G0135 Trochodendron aralioides HOM05D004155 ORTHO05D004837 4.2e-86 322.0 245 72.7
Prupe.5G069700 Prunus persica HOM05D004155 ORTHO05D004837 1.6e-85 320.1 263 68.1
Cfa012719 Carpinus fangiana HOM05D004155 ORTHO05D004837 2.1e-85 319.7 266 67.3
Hma1.2p1_0316F.1_g123160 Hydrangea macrophylla HOM05D004155 ORTHO05D004837 8.0e-85 317.8 264 68.6
CiPaw.12G052800 Carya illinoinensis HOM05D004155 ORTHO05D004837 1.0e-84 317.4 266 68.0
Thecc.03G251400 Theobroma cacao HOM05D004155 ORTHO05D004837 1.4e-84 317.0 265 67.9
Duzib136G0003 Durio zibethinus HOM05D004155 ORTHO05D004837 1.8e-84 316.6 264 66.3
Gohir.A08G170500 Gossypium hirsutum HOM05D004155 ORTHO05D004837 5.2e-84 315.1 264 67.8
QL12p012142 Quercus lobata HOM05D004155 ORTHO05D004837 8.8e-84 314.3 263 67.3
VMungo0251G3701 Vigna mungo HOM05D004155 ORTHO05D004837 8.8e-84 314.3 264 66.3
ClCG10G002690 Citrullus lanatus HOM05D004155 ORTHO05D004837 2.0e-83 313.2 263 66.9
Duzib068G1244 Durio zibethinus HOM05D004155 ORTHO05D004837 2.0e-83 313.2 265 66.4
CSS0021878 Camellia sinensis var. sinensis HOM05D004155 ORTHO05D004837 3.3e-83 312.4 258 68.2
Ca_21966_v3 Cicer arietinum L. HOM05D004155 ORTHO05D004837 3.3e-83 312.4 266 67.3
Gohir.D08G188700 Gossypium hirsutum HOM05D004155 ORTHO05D004837 3.3e-83 312.4 264 67.0
Gorai.004G198700 Gossypium raimondii HOM05D004155 ORTHO05D004837 3.3e-83 312.4 264 67.0
Manes.01G080600 Manihot esculenta HOM05D004155 ORTHO05D004837 3.3e-83 312.4 262 67.6
Medtr4g100930 Medicago truncatula HOM05D004155 ORTHO05D004837 3.3e-83 312.4 267 68.2
Lj2A217G31 Lonicera japonica HOM05D004155 ORTHO05D004837 4.4e-83 312.0 264 65.9
MD06G1058700 Malus domestica HOM05D004155 ORTHO05D004837 5.7e-83 311.6 264 66.7
Atru.chr9.1312 Acer truncatum HOM05D004155 ORTHO05D004837 7.5e-83 311.2 265 66.4
CSS0005110 Camellia sinensis var. sinensis HOM05D004155 ORTHO05D004837 7.5e-83 311.2 258 68.2
Phvul.003G220600 Phaseolus vulgaris HOM05D004155 ORTHO05D004837 7.5e-83 311.2 264 65.9
Potri.001G157900 Populus trichocarpa HOM05D004155 ORTHO05D004837 9.7e-83 310.8 263 64.6
MELO3C013940.2 Cucumis melo HOM05D004155 ORTHO05D004837 1.3e-82 310.5 264 66.7
Glyma.17G141800 Glycine max HOM05D004155 ORTHO05D004837 3.7e-82 308.9 265 66.4
Actinidia22301 Actinidia chinensis HOM05D004155 ORTHO05D004837 1.8e-81 306.6 264 66.3
TWI81G0233 Tripterygium wilfordii HOM05D004155 ORTHO05D004837 1.8e-81 306.6 264 65.2
Manes.02G039600 Manihot esculenta HOM05D004155 ORTHO05D004837 3.1e-81 305.8 264 65.5
Gohir.D12G219500 Gossypium hirsutum HOM05D004155 ORTHO05D004837 4.1e-81 305.4 264 64.0
PSO782G0374 Papaver somniferum HOM05D004155 ORTHO05D004837 7.0e-81 304.7 271 66.4
TPR.G11991 Trifolium pratense HOM05D004155 ORTHO05D004837 9.1e-81 304.3 266 66.5
Lalb_Chr16g0386681 Lupinus albus HOM05D004155 ORTHO05D004837 1.2e-80 303.9 263 64.6
PSO063G2044 Papaver somniferum HOM05D004155 ORTHO05D004837 1.2e-80 303.9 271 66.1
CsaV3_3G002720 Cucumis sativus L. HOM05D004155 ORTHO05D004837 1.6e-80 303.5 263 66.2
Glyma.05G059400 Glycine max HOM05D004155 ORTHO05D004837 1.6e-80 303.5 264 65.5
Gorai.008G235200 Gossypium raimondii HOM05D004155 ORTHO05D004837 2.0e-80 303.1 264 63.6
PGR142G3296 Punica granatum HOM05D004155 ORTHO05D004837 2.7e-80 302.8 261 65.1
Lj4g0023659 Lotus japonicus HOM05D004155 ORTHO05D004837 3.5e-80 302.4 268 65.3
Lalb_Chr09g0330111 Lupinus albus HOM05D004155 ORTHO05D004837 3.5e-80 302.4 270 64.1
CDE11G1226 Ceratophyllum demersum HOM05D004155 ORTHO05D004837 7.7e-80 301.2 266 62.4
Gohir.A12G217000 Gossypium hirsutum HOM05D004155 ORTHO05D004837 7.7e-80 301.2 264 63.6
Ciclev10021960m.g Citrus clementina HOM05D004155 ORTHO05D004837 1.7e-79 300.1 263 64.6
Sed0004864 Sechium edule HOM05D004155 ORTHO05D004837 1.7e-79 300.1 266 65.4
Sopen06g020840 Solanum pennellii HOM05D004155 ORTHO05D004837 2.2e-79 299.7 263 65.8
Solyc06g060720.3 Solanum lycopersicum HOM05D004155 ORTHO05D004837 2.9e-79 299.3 263 65.8
Oeu026407.1 Olea europaea HOM05D004155 ORTHO05D004837 3.8e-79 298.9 267 65.2
EL10Ac9g21736 Beta vulgaris HOM05D004155 ORTHO05D004837 6.5e-79 298.1 268 63.8
Cc08_g12420 Coffea canephora HOM05D004155 ORTHO05D004837 6.5e-79 298.1 264 63.3
Sc01g0008440 Simmondsia chinensis HOM05D004155 ORTHO05D004837 8.5e-79 297.7 268 64.9
PGSC0003DMG400011880 Solanum tuberosum HOM05D004155 ORTHO05D004837 8.5e-79 297.7 263 65.4
CANSAT21G0249 Cannabis sativa HOM05D004155 ORTHO05D004837 1.1e-78 297.4 262 65.6
CAN.G62.43 Capsicum annuum HOM05D004155 ORTHO05D004837 3.2e-78 295.8 265 65.3
Duzib084G0799 Durio zibethinus HOM05D004155 ORTHO05D004837 4.2e-78 295.4 265 64.5
TWI60G0516 Tripterygium wilfordii HOM05D004155 ORTHO05D004837 4.2e-78 295.4 264 64.4
COL.COLO4_37174 Corchorus olitorius HOM05D004155 ORTHO05D004837 2.7e-77 292.7 283 60.8
Oeu040215.1 Olea europaea HOM05D004155 ORTHO05D004837 8.0e-77 291.2 252 66.7
CAN.G1058.24 Capsicum annuum HOM05D004155 ORTHO05D004837 1.0e-76 290.8 263 63.1
Eucgr.I02746 Eucalyptus grandis HOM05D004155 ORTHO05D004837 1.0e-76 290.8 261 62.8
RcHm_v2.0_Chr7g0203271 Rosa chinensis HOM05D004155 ORTHO05D004837 1.4e-76 290.4 266 63.2
DCAR_006831 Daucus carota HOM05D004155 ORTHO05D004837 3.0e-76 289.3 265 63.0
CDE09G1113 Ceratophyllum demersum HOM05D004155 ORTHO05D004837 5.2e-76 288.5 267 61.8
Nitab4.5_0005960g0040 Nicotiana tabacum HOM05D004155 ORTHO05D004837 8.8e-76 287.7 263 64.6
Dinv21638 Davidia involucrata HOM05D004155 ORTHO05D004837 2.6e-75 286.2 230 67.4
FvH4_5g18890 Fragaria vesca HOM05D004155 ORTHO05D004837 2.6e-75 286.2 266 63.2
FAN08G3385 Fragaria x ananassa HOM05D004155 ORTHO05D004837 3.4e-75 285.8 265 62.3
FAN18G2873 Fragaria x ananassa HOM05D004155 ORTHO05D004837 3.4e-75 285.8 266 63.2
FAN18G3217 Fragaria x ananassa HOM05D004155 ORTHO05D004837 3.4e-75 285.8 266 63.2
FAN18G4261 Fragaria x ananassa HOM05D004155 ORTHO05D004837 3.4e-75 285.8 266 63.2
THA.LOC104820827 Tarenaya hassleriana HOM05D004155 ORTHO05D004837 5.7e-75 285.0 265 62.3
FAN04G2128 Fragaria x ananassa HOM05D004155 ORTHO05D004837 1.3e-74 283.9 265 62.3
Ah.11g040960 Amaranthus hybridus HOM05D004155 ORTHO05D004837 1.7e-74 283.5 252 64.3
MSTRG.25524 Avicennia marina HOM05D004155 ORTHO05D004837 1.7e-74 283.5 268 62.7
Psat4g072240 Pisum sativum HOM05D004155 ORTHO05D004837 1.7e-74 283.5 267 64.0
Sabra03G0047400 Salix brachista HOM05D004155 ORTHO05D004837 1.7e-74 283.5 323 54.2
Ah.11g040940 Amaranthus hybridus HOM05D004155 ORTHO05D004837 2.2e-74 283.1 252 64.3
Thhalv10014511m.g Eutrema salsugineum HOM05D004155 ORTHO05D004837 3.7e-74 282.3 267 59.2
arahy.Tifrunner.gnm1.ann1.FN76PE Arachis hypogaea HOM05D004155 ORTHO05D004837 4.8e-74 282.0 265 61.9
PGSC0003DMG400004812 Solanum tuberosum HOM05D004155 ORTHO05D004837 6.3e-74 281.6 263 62.7
HPP92_007424 Vanilla planifolia HOM05D004155 ORTHO05D004837 1.1e-73 280.8 265 61.9
Aa31LG11G12130 Aethionema arabicum HOM05D004155 ORTHO05D004837 1.4e-73 280.4 259 59.1
THA.LOC104802903 Tarenaya hassleriana HOM05D004155 ORTHO05D004837 1.4e-73 280.4 265 61.5
CARHR077510 Cardamine hirsuta HOM05D004155 ORTHO05D004837 3.1e-73 279.3 266 59.0
FAN13G1725 Fragaria x ananassa HOM05D004155 ORTHO05D004837 3.1e-73 279.3 264 61.0
MSTRG.12099 Avicennia marina HOM05D004155 ORTHO05D004837 1.6e-72 276.9 270 62.2
arahy.Tifrunner.gnm1.ann1.9Q5ZL0 Arachis hypogaea HOM05D004155 ORTHO05D004837 2.0e-72 276.6 247 64.0
C09p59610 Brassica napus HOM05D004155 ORTHO05D004837 4.5e-72 275.4 260 57.7
Sp3g02480 Schrenkiella parvula HOM05D004155 ORTHO05D004837 4.5e-72 275.4 261 58.6
SGA_v2.0_scaffold146G36157 Striga asiatica HOM05D004155 ORTHO05D004837 1.0e-71 274.2 270 61.1
BcaB08g36763 Brassica carinata HOM05D004155 ORTHO05D004837 1.7e-71 273.5 267 56.9
CARHR195630 Cardamine hirsuta HOM05D004155 ORTHO05D004837 1.7e-71 273.5 260 58.5
DCAR_008491 Daucus carota HOM05D004155 ORTHO05D004837 2.9e-71 272.7 265 59.2
AL6G28640 Arabidopsis lyrata HOM05D004155 ORTHO05D004837 3.8e-71 272.3 269 57.2
BolC9t58800H Brassica oleracea HOM05D004155 ORTHO05D004837 3.8e-71 272.3 260 57.3
AT5G17550 Arabidopsis thaliana HOM05D004155 ORTHO05D004837 5.0e-71 271.9 268 57.5
Carub.0006s1579 Capsella rubella HOM05D004155 ORTHO05D004837 5.0e-71 271.9 267 58.1
SalBow5G4949 Salvia bowleyana HOM05D004155 ORTHO05D004837 5.0e-71 271.9 252 63.9
BraA10t44245Z Brassica rapa HOM05D004155 ORTHO05D004837 8.6e-71 271.2 260 57.3
Nitab4.5_0000312g0050 Nicotiana tabacum HOM05D004155 ORTHO05D004837 8.6e-71 271.2 206 68.9
BcaC04g18780 Brassica carinata HOM05D004155 ORTHO05D004837 1.1e-70 270.8 260 57.3
Aa31LG5G14010 Aethionema arabicum HOM05D004155 ORTHO05D004837 1.9e-70 270.0 264 58.7
AT3G03490 Arabidopsis thaliana HOM05D004155 ORTHO05D004837 1.9e-70 270.0 265 59.2
A10p21850 Brassica napus HOM05D004155 ORTHO05D004837 1.9e-70 270.0 260 57.3
Sabra01G0133600 Salix brachista HOM05D004155 ORTHO05D004837 2.5e-70 269.6 329 51.1
Sp6g26670 Schrenkiella parvula HOM05D004155 ORTHO05D004837 3.2e-70 269.2 259 56.8
HanXRQChr03g0088551 Helianthus annuus HOM05D004155 ORTHO05D004837 4.2e-70 268.9 247 62.3
Carub.0003s0263 Capsella rubella HOM05D004155 ORTHO05D004837 7.2e-70 268.1 265 58.5
Nitab4.5_0001076g0090 Nicotiana tabacum HOM05D004155 ORTHO05D004837 1.6e-69 266.9 202 70.3
BcaB04g19367 Brassica carinata HOM05D004155 ORTHO05D004837 2.8e-69 266.2 266 56.8
AL3G13170 Arabidopsis lyrata HOM05D004155 ORTHO05D004837 6.1e-69 265.0 260 56.9
Ah.11g040910 Amaranthus hybridus HOM05D004155 ORTHO05D004837 4.0e-68 262.3 262 58.4
AUR62016725 Chenopodium quinoa HOM05D004155 ORTHO05D004837 4.0e-68 262.3 267 59.2
Peaxi162Scf00174g00143 Petunia axillaris HOM05D004155 ORTHO05D004837 5.2e-68 261.9 245 62.4
BraA03t12501Z Brassica rapa HOM05D004155 ORTHO05D004837 6.8e-68 261.5 260 58.1
ECA240G3289 Erigeron canadensis HOM05D004155 ORTHO05D004837 1.2e-67 260.8 262 60.7
SGA_v2.0_scaffold120G32880 Striga asiatica HOM05D004155 ORTHO05D004837 2.6e-67 259.6 250 61.2
Lsat_1_v5_gn_6_91040 Lactuca sativa HOM05D004155 ORTHO05D004837 3.4e-67 259.2 249 62.7
Nitab4.5_0000618g0060 Nicotiana tabacum HOM05D004155 ORTHO05D004837 5.7e-67 258.5 231 63.6
unitig_37.g12342 Utricularia gibba HOM05D004155 ORTHO05D004837 5.7e-67 258.5 257 57.6
ATR0317G023 Amborella trichopoda HOM05D004155 ORTHO05D004837 9.8e-67 257.7 258 59.3
BcaC01g04400 Brassica carinata HOM05D004155 ORTHO05D004837 9.8e-67 257.7 265 57.7
C03p40540 Brassica napus HOM05D004155 ORTHO05D004837 9.8e-67 257.7 265 57.7
BolC3t16319H Brassica oleracea HOM05D004155 ORTHO05D004837 9.8e-67 257.7 265 57.7
Migut.A00944 Erythranthe guttata HOM05D004155 ORTHO05D004837 1.7e-66 256.9 255 61.2
A03p33290 Brassica napus HOM05D004155 ORTHO05D004837 1.8e-65 253.4 265 57.0
HanXRQChr06g0164361 Helianthus annuus HOM05D004155 ORTHO05D004837 1.6e-64 250.4 261 56.7
Nn1g00995 Nelumbo nucifera HOM05D004155 ORTHO05D004837 5.9e-64 248.4 238 61.3
Rhsim02G0215900 Rhododendron simsii HOM05D004155 ORTHO05D004837 1.9e-62 243.4 306 50.3
Os02g0661000 Oryza sativa ssp. japonica HOM05D004155 ORTHO05D004837 2.0e-59 233.4 264 53.0
Phvul.003G220550 Phaseolus vulgaris HOM05D004155 ORTHO05D004837 7.5e-59 231.5 147 79.6
Zm00001eb249680 Zea mays HOM05D004155 ORTHO05D004837 2.2e-58 229.9 263 51.7
Ah.11g040970 Amaranthus hybridus HOM05D004155 ORTHO05D004837 5.4e-57 225.3 248 54.0
Actinidia13193 Actinidia chinensis HOM05D004155 ORTHO05D004837 2.3e-55 219.9 145 75.9
vmacro11263 Vaccinium macrocarpon HOM05D004155 ORTHO05D004837 1.5e-54 217.2 136 79.4
Gorai.003G171500 Gossypium raimondii HOM05D004155 ORTHO05D004837 1.8e-52 210.3 174 64.4
Gohir.D03G162900 Gossypium hirsutum HOM05D004155 ORTHO05D004837 5.2e-52 208.8 167 65.9
Zm00001eb186660 Zea mays HOM05D004155 ORTHO05D004837 1.5e-51 207.2 263 49.4
Gohir.A03G008100 Gossypium hirsutum HOM05D004155 ORTHO05D004837 2.0e-51 206.8 167 65.3
Pp3c2_16800 Physcomitrium patens HOM05D004155 ORTHO05D004837 3.2e-49 199.5 281 45.6
Mapoly0045s0092 Marchantia polymorpha HOM05D004155 ORTHO05D004837 3.6e-45 186.0 287 42.5
Cpa.g.sc43.156 Carica papaya HOM05D004155 ORTHO05D004837 1.1e-44 184.5 113 78.8
TPR.G37592 Trifolium pratense HOM05D004155 ORTHO05D004837 1.6e-40 170.6 118 74.6
Ah.11g040930 Amaranthus hybridus HOM05D004155 ORTHO05D004837 3.9e-39 166.0 211 49.3
CBR_g22421 Chara braunii HOM05D004155 ORTHO05D004837 1.4e-33 147.5 283 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1233 Anthoceros agrestis HOM05D004155 ORTHO05D004837 1.9e-33 147.1 292 36.6
SMO146G0254 Selaginella moellendorffii HOM05D004155 ORTHO05D004837 4.2e-25 119.4 91 63.7
SMO340G0179 Selaginella moellendorffii HOM05D004155 ORTHO05D004837 1.2e-24 117.9 91 60.4
CAN.G1058.18 Capsicum annuum HOM05D002401 ORTHO05D007109 3.6e-21 106.3 70 74.3
Cpa.g.sc43.157 Carica papaya HOM05D004155 ORTHO05D004837 6.2e-21 105.5 142 52.1
Actinidia14427 Actinidia chinensis HOM05D004155 ORTHO05D004837 3.8e-18 96.3 145 50.3
TPR.G37609 Trifolium pratense HOM05D004155 ORTHO05D004837 1.4e-17 94.4 113 54.0
Cre02.g119000 Chlamydomonas reinhardtii HOM05D004155 ORTHO05D004837 3.2e-17 93.2 90 45.6
PRCOL_00005614 Prasinoderma coloniale HOM05D004155 ORTHO05D004837 3.2e-17 93.2 111 38.7
Thhalv10015034m.g Eutrema salsugineum HOM05D004155 ORTHO05D004837 9.6e-14 81.6 83 54.2
arahy.Tifrunner.gnm1.ann1.Z2VGSW Arachis hypogaea HOM05D004155 ORTHO05D004837 1.4e-12 77.8 76 60.5
PSO384G2334 Papaver somniferum HOM05D004155 ORTHO05D004837 2.4e-12 77.0 135 46.7
arahy.Tifrunner.gnm1.ann1.BEL5CJ Arachis hypogaea HOM05D004155 ORTHO05D004837 4.0e-12 76.3 76 60.5
SEGI_17945 Sequoiadendron giganteum HOM05D004155 ORTHO05D004837 6.9e-12 75.5 149 41.6
Pp3c1_22650 Physcomitrium patens HOM05D004155 ORTHO05D004837 9.9e-11 71.6 81 48.1
PGSC0003DMG400045666 Solanum tuberosum HOM05D004155 ORTHO05D004837 3.5e-08 63.2 83 49.4
Cfa022446 Carpinus fangiana HOM05D004155 ORTHO05D126510 4.6e-08 62.8 146 32.2


User provided reference genes

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