Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 4.0e-110 401.4 191 100.0
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.9e-59 233.0 185 64.3
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 6.0e-58 228.0 184 61.4
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 5.1e-57 224.9 176 63.6
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 5.1e-57 224.9 185 61.6
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 5.6e-56 221.5 184 60.9
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 7.4e-56 221.1 180 60.6
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 7.4e-56 221.1 180 60.6
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 9.6e-56 220.7 194 58.8
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 4.8e-55 218.4 185 60.0
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 1.8e-54 216.5 185 60.0
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.0e-53 213.0 115 85.2
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 2.0e-53 213.0 183 58.5
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 2.0e-53 213.0 185 57.8
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.6e-53 212.6 180 61.1
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 5.8e-53 211.5 181 58.0
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 7.6e-53 211.1 181 58.0
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 1.0e-52 210.7 183 57.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.0e-52 210.7 117 82.1
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 1.7e-52 209.9 185 58.9
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.5e-51 206.1 185 57.8
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.5e-51 206.1 183 55.7
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 7.1e-51 204.5 185 57.3
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.1e-51 204.5 185 56.8
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.1e-51 204.5 185 57.3
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 9.3e-51 204.1 184 56.5
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 9.3e-51 204.1 181 57.5
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.2e-50 203.8 181 54.1
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.6e-50 203.4 183 58.5
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.5e-50 202.2 184 57.1
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 3.5e-50 202.2 184 54.3
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 6.0e-50 201.4 119 78.2
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 6.0e-50 201.4 184 56.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.8e-49 199.9 187 52.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.8e-49 199.9 187 52.9
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.3e-49 199.5 184 56.5
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 3.0e-49 199.1 187 52.9
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 3.9e-49 198.7 176 58.0
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.9e-49 198.7 181 54.1
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 8.7e-49 197.6 120 75.8
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 8.7e-49 197.6 190 54.2
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 8.7e-49 197.6 181 53.6
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.9e-48 196.4 184 56.5
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.9e-48 196.4 186 55.9
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 5.7e-48 194.9 117 75.2
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 5.7e-48 194.9 117 76.9
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 7.4e-48 194.5 191 52.9
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 2.1e-47 193.0 117 77.8
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 2.8e-47 192.6 184 55.4
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 3.7e-47 192.2 117 78.6
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 3.7e-47 192.2 186 54.3
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 4.8e-47 191.8 184 53.3
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 6.3e-47 191.4 184 52.7
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 8.2e-47 191.0 176 55.7
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 8.2e-47 191.0 184 52.7
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.1e-46 190.7 132 65.9
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 1.4e-46 190.3 118 78.0
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.4e-46 189.5 135 67.4
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 5.3e-46 188.3 184 53.8
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 6.9e-46 188.0 132 69.7
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 9.0e-46 187.6 118 77.1
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.2e-45 187.2 117 75.2
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.5e-45 186.8 181 53.0
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 3.4e-45 185.7 184 53.8
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 7.6e-45 184.5 117 69.2
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.9e-44 182.6 184 52.7
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 3.2e-43 179.1 181 53.6
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 4.2e-43 178.7 184 54.3
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 6.1e-42 174.9 208 46.6
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 6.1e-42 174.9 120 71.7
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.8e-41 173.3 154 57.1
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.5e-40 170.2 140 59.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.5e-40 170.2 101 76.2
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 1.6e-39 166.8 102 77.5
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 8.2e-39 164.5 145 58.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.1e-38 164.1 108 71.3
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.6e-37 159.5 202 47.5
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 5.9e-37 158.3 156 52.6
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 1.1e-35 154.1 101 63.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.9e-35 153.3 96 71.9
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 4.2e-35 152.1 102 72.5
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 4.6e-34 148.7 110 69.1
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 7.9e-34 147.9 100 72.0
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.4e-33 147.1 101 68.3
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.8e-33 146.7 100 72.0
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.8e-33 146.7 152 50.0
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 3.0e-33 146.0 89 73.0
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.9e-33 145.6 165 46.1
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 2.6e-32 142.9 121 53.7
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 5.7e-32 141.7 119 53.8
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 1.4e-30 137.1 105 63.8
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.1e-30 136.0 77 77.9
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 3.1e-30 136.0 117 50.4
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 3.1e-30 136.0 183 43.7
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 6.9e-30 134.8 101 67.3
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 5.9e-29 131.7 122 54.9
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.0e-28 131.0 76 76.3
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 1.6e-26 123.6 131 52.7
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-26 122.5 87 66.7
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 7.9e-26 121.3 86 67.4
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-25 120.9 75 74.7
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.3e-25 119.8 73 75.3
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 2.6e-24 116.3 127 48.8
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 7.4e-24 114.8 140 46.4
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 1.4e-22 110.5 106 52.8
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 7.0e-22 108.2 180 36.7
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.6e-21 106.3 68 72.1
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-19 100.9 90 58.9
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.1e-19 100.9 82 58.5
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 9.4e-19 97.8 133 44.4
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 1.6e-18 97.1 120 44.2
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 4.0e-17 92.4 99 43.4
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 5.2e-17 92.0 122 44.3
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.5e-11 72.0 52 67.3


User provided reference genes

Program Settings