Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 1.6e-132 476.1 236 100.0
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 2.4e-56 223.0 247 55.1
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.6e-55 220.3 248 54.0
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 2.6e-55 219.5 194 61.9
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.7e-54 216.9 248 52.0
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.7e-54 216.9 187 63.6
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 2.9e-54 216.1 251 52.2
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 6.5e-54 214.9 187 62.0
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 1.9e-53 213.4 247 51.4
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 7.2e-53 211.5 183 65.0
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 1.2e-52 210.7 248 52.4
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 1.6e-52 210.3 196 60.7
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 1.6e-52 210.3 247 51.8
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 1.0e-51 207.6 248 51.6
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 2.3e-51 206.5 184 64.1
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 2.3e-51 206.5 249 49.8
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 4.0e-51 205.7 188 61.2
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 4.0e-51 205.7 191 62.8
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 4.0e-51 205.7 243 52.7
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 5.2e-51 205.3 250 51.6
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 5.2e-51 205.3 242 51.2
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 6.8e-51 204.9 247 50.2
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.0e-50 203.4 251 49.8
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 2.0e-50 203.4 249 49.0
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 2.0e-50 203.4 246 50.4
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 2.0e-50 203.4 247 49.8
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 2.6e-50 203.0 247 51.4
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 3.4e-50 202.6 181 63.0
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 4.4e-50 202.2 251 50.6
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 5.7e-50 201.8 248 52.4
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 7.5e-50 201.4 251 51.0
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 9.8e-50 201.1 248 49.2
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 9.8e-50 201.1 249 50.2
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 9.8e-50 201.1 249 49.0
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 1.3e-49 200.7 250 50.4
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.3e-49 200.7 196 58.2
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 1.7e-49 200.3 251 49.8
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.2e-49 199.9 248 49.6
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 2.2e-49 199.9 249 50.6
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 2.8e-49 199.5 252 48.0
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 2.8e-49 199.5 249 48.2
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 4.8e-49 198.7 194 60.3
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 6.3e-49 198.4 188 61.2
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 6.3e-49 198.4 248 49.6
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 1.4e-48 197.2 247 50.6
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.4e-48 197.2 251 49.8
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 1.4e-48 197.2 249 49.0
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 1.8e-48 196.8 247 47.8
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 1.8e-48 196.8 184 60.3
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 2.4e-48 196.4 192 59.4
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 2.4e-48 196.4 248 48.8
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 2.4e-48 196.4 188 59.0
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 3.1e-48 196.1 185 59.5
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 4.1e-48 195.7 251 49.4
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 4.1e-48 195.7 250 48.8
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 5.4e-48 195.3 248 49.2
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 5.4e-48 195.3 251 49.0
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 7.0e-48 194.9 252 49.2
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 9.1e-48 194.5 249 48.6
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.2e-47 194.1 244 49.6
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 1.2e-47 194.1 246 49.2
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 1.2e-47 194.1 256 47.7
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 1.2e-47 194.1 251 47.4
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 2.0e-47 193.4 246 50.0
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 2.0e-47 193.4 186 55.9
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 4.5e-47 192.2 192 58.9
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 5.9e-47 191.8 184 59.8
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 1.0e-46 191.0 249 47.8
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 1.3e-46 190.7 185 60.0
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 1.3e-46 190.7 256 50.4
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 1.3e-46 190.7 251 49.0
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 2.2e-46 189.9 181 59.1
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 2.2e-46 189.9 244 49.2
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 5.0e-46 188.7 251 47.8
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 6.5e-46 188.3 194 57.2
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 8.5e-46 188.0 243 48.6
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 1.9e-45 186.8 190 57.4
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 2.5e-45 186.4 194 56.7
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 4.2e-45 185.7 183 58.5
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 4.2e-45 185.7 249 47.0
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 9.4e-45 184.5 186 57.5
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.2e-44 184.1 193 55.4
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 2.1e-44 183.3 250 47.6
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.7e-44 183.0 237 48.9
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 2.7e-44 183.0 250 47.6
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 2.7e-44 183.0 189 55.0
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 4.7e-44 182.2 250 47.6
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 4.7e-44 182.2 191 59.2
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 1.4e-43 180.6 196 53.6
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 1.8e-43 180.3 239 45.6
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 2.3e-43 179.9 196 57.1
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 2.6e-42 176.4 192 55.7
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 3.4e-42 176.0 186 54.3
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 7.5e-42 174.9 184 57.1
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 1.3e-41 174.1 242 47.1
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 2.8e-41 172.9 191 52.9
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 4.9e-41 172.2 188 54.3
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 4.9e-41 172.2 178 57.3
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 1.4e-40 170.6 266 42.9
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 5.4e-40 168.7 260 43.1
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 2.0e-39 166.8 194 55.2
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 5.9e-39 165.2 257 42.8
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 1.3e-38 164.1 191 51.3
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 3.8e-38 162.5 202 51.0
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 3.3e-37 159.5 182 56.6
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 2.1e-36 156.8 183 54.1
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 3.6e-36 156.0 250 44.0
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 4.7e-36 155.6 243 41.6
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 3.0e-35 152.9 237 43.0
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 3.0e-35 152.9 246 41.5
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 4.0e-35 152.5 203 48.8
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 5.2e-35 152.1 254 42.1
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 6.8e-35 151.8 246 42.7
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.2e-34 151.0 243 41.2
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 3.4e-34 149.4 253 40.3
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 7.5e-34 148.3 247 41.7
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.3e-33 147.5 202 44.6
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 2.9e-33 146.4 256 41.4
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 3.7e-33 146.0 253 41.1
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 3.7e-33 146.0 260 41.5
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 1.4e-32 144.1 252 41.7
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 1.8e-32 143.7 257 41.2
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 3.2e-32 142.9 179 49.7
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 4.1e-32 142.5 223 43.5
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 5.4e-32 142.1 239 39.7
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.2e-31 141.0 268 40.7
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 5.9e-31 138.7 209 42.1
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 1.0e-30 137.9 192 50.0
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 1.3e-30 137.5 220 40.5
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 3.0e-30 136.3 150 53.3
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 3.0e-30 136.3 200 47.5
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 5.0e-30 135.6 191 45.5
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 1.1e-29 134.4 245 38.8
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 2.5e-29 133.3 175 46.9
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 3.6e-28 129.4 260 35.0
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 4.7e-28 129.0 182 43.4
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 4.7e-28 129.0 186 44.6
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 6.2e-28 128.6 170 46.5
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 4.0e-27 125.9 244 37.7
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 5.2e-27 125.6 181 45.9
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 6.8e-27 125.2 181 44.2
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 8.9e-27 124.8 182 43.4
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 8.9e-27 124.8 198 43.4
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 9.8e-26 121.3 255 37.6
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.3e-25 120.9 140 52.9
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 2.2e-25 120.2 263 39.2
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 2.2e-25 120.2 191 45.5
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 4.9e-25 119.0 191 45.5
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 1.4e-24 117.5 175 43.4
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 1.4e-24 117.5 182 42.3
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 1.4e-24 117.5 175 43.4
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 1.4e-24 117.5 191 42.9
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 3.2e-24 116.3 246 36.2
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 5.4e-24 115.5 195 42.6
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 7.0e-24 115.2 191 41.4
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 7.0e-24 115.2 217 37.3
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 9.2e-24 114.8 175 42.9
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 2.0e-23 113.6 184 43.5
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 4.6e-23 112.5 181 44.2
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 1.3e-22 110.9 272 36.0
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.9e-21 107.1 187 42.2
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 2.1e-20 103.6 252 34.9
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 3.6e-20 102.8 180 40.0
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 6.8e-19 98.6 93 52.7
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.1e-16 91.3 89 55.1
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 1.6e-15 87.4 253 33.6
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 6.0e-15 85.5 188 38.3
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 1.1e-13 81.3 213 35.2
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 1.1e-13 81.3 270 33.0
MBI01_g34161_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 4.3e-13 79.3 125 42.4
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 8.1e-12 75.1 209 34.0
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 8.9e-11 71.6 216 32.4
HPP92_002804 Vanilla planifolia HOM05D003947 ORTHO05D004614 7.6e-10 68.6 186 29.6
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 1.1e-08 64.7 145 39.3
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 7.1e-08 62.0 154 39.0


User provided reference genes

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