Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g06922_MAGBIO Magnolia biondii HOM05D013799 ORTHO05D013699 1.4e-58 230.3 215 100.0
MBI04_g11919_MAGBIO Magnolia biondii HOM05D002986 ORTHO05D003966 8.9e-34 147.9 149 98.7
Aqoxy3G02934 Aquilegia oxysepala HOM05D002986 ORTHO05D003966 3.2e-31 139.4 103 81.6
arahy.Tifrunner.gnm1.ann1.Z51W7G Arachis hypogaea HOM05D002986 ORTHO05D013699 9.3e-23 111.3 106 50.0
RcHm_v2.0_Chr1g0340531 Rosa chinensis HOM05D014088 ORTHO05D013699 2.1e-19 100.1 208 60.6
SalBow5G2864 Salvia bowleyana HOM05D001628 ORTHO05D001568 3.0e-13 79.7 42 83.3
Eucgr.E00027 Eucalyptus grandis HOM05D002986 ORTHO05D003966 5.1e-13 79.0 42 83.3
Dinv32619 Davidia involucrata HOM05D002986 ORTHO05D007611 8.7e-13 78.2 42 83.3
HanXRQChr04g0120401 Helianthus annuus HOM05D002986 ORTHO05D003966 1.1e-12 77.8 42 85.7
Manes.05G019600 Manihot esculenta HOM05D002986 ORTHO05D003966 1.9e-12 77.0 42 81.0
Ciclev10024306m.g Citrus clementina HOM05D002986 ORTHO05D003966 2.5e-12 76.6 42 81.0
Medtr7g060720 Medicago truncatula HOM05D002986 ORTHO05D003966 3.3e-12 76.3 107 36.4
Ca_26027_v3 Cicer arietinum L. HOM05D002986 ORTHO05D003966 4.3e-12 75.9 86 44.2
DCAR_006392 Daucus carota HOM05D002986 ORTHO05D003966 4.3e-12 75.9 42 81.0
DCAR_022794 Daucus carota HOM05D002986 ORTHO05D003966 4.3e-12 75.9 42 81.0
Lsat_1_v5_gn_7_4680 Lactuca sativa HOM05D002986 ORTHO05D003966 5.6e-12 75.5 42 81.0
GSVIVG01031218001 Vitis vinifera HOM05D002986 ORTHO05D007611 7.4e-12 75.1 42 81.0
SalBow4G2308 Salvia bowleyana HOM05D002986 ORTHO05D003966 1.6e-11 73.9 42 78.6
CSS0003779 Camellia sinensis var. sinensis HOM05D002986 ORTHO05D003966 2.1e-11 73.6 42 78.6
ECA236G0037 Erigeron canadensis HOM05D002986 ORTHO05D003966 3.6e-11 72.8 42 78.6
SHI13050 Sapria himalayana HOM05D002986 ORTHO05D003966 3.6e-11 72.8 42 76.2
ATR0589G108 Amborella trichopoda HOM05D013799 ORTHO05D013699 4.8e-11 72.4 80 46.2
HanXRQChr04g0120331 Helianthus annuus HOM05D002986 ORTHO05D003966 8.1e-11 71.6 42 81.0
RcHm_v2.0_Chr1g0340331 Rosa chinensis HOM05D013799 ORTHO05D013699 8.1e-11 71.6 41 75.6
CiPaw.01G079100 Carya illinoinensis HOM05D002986 ORTHO05D003966 1.1e-10 71.2 42 76.2
Lalb_Chr19g0125351 Lupinus albus HOM05D002986 ORTHO05D003966 1.4e-10 70.9 42 76.2
Ah.05g169180 Amaranthus hybridus HOM05D002986 ORTHO05D007611 2.4e-10 70.1 42 69.0
ATR0582G108 Amborella trichopoda HOM05D013799 ORTHO05D013699 3.1e-10 69.7 104 37.5
Psat3g140560 Pisum sativum HOM05D002986 ORTHO05D003966 3.1e-10 69.7 84 41.7
BolC6t39573H Brassica oleracea HOM05D003041 ORTHO05D003400 4.0e-10 69.3 92 39.1
FvH4_7g08360 Fragaria vesca HOM05D013799 ORTHO05D013699 5.3e-10 68.9 76 40.8
FvH4_7g08341 Fragaria vesca HOM05D002986 ORTHO05D003966 6.9e-10 68.6 42 73.8
Sopen01g039970 Solanum pennellii HOM05D002986 ORTHO05D009442 6.9e-10 68.6 41 78.0
Sopen06g004450 Solanum pennellii HOM05D002986 ORTHO05D013699 6.9e-10 68.6 41 78.0
AUR62024804 Chenopodium quinoa HOM05D002986 ORTHO05D003966 9.0e-10 68.2 41 70.7
AUR62032416 Chenopodium quinoa HOM05D002986 ORTHO05D013699 9.0e-10 68.2 41 70.7
arahy.Tifrunner.gnm1.ann1.T6B6L0 Arachis hypogaea HOM05D002986 ORTHO05D003966 1.5e-09 67.4 42 71.4
MD02G1232100 Malus domestica HOM05D002986 ORTHO05D003966 1.5e-09 67.4 42 71.4
arahy.Tifrunner.gnm1.ann1.N9VQ32 Arachis hypogaea HOM05D002986 ORTHO05D003966 4.5e-09 65.9 42 69.0
RcHm_v2.0_Chr1g0340621 Rosa chinensis HOM05D014088 ORTHO05D013699 4.5e-09 65.9 106 56.6
Glyma.07G131700 Glycine max HOM05D002986 ORTHO05D003966 7.6e-09 65.1 42 66.7
arahy.Tifrunner.gnm1.ann1.A8R8TX Arachis hypogaea HOM05D002986 ORTHO05D003966 1.3e-08 64.3 42 69.0
CsaV3_3G027230 Cucumis sativus L. HOM05D002986 ORTHO05D003966 1.7e-08 63.9 39 71.8
Phvul.008G101200 Phaseolus vulgaris HOM05D002986 ORTHO05D003966 2.2e-08 63.5 42 66.7
EL10Ac1g01397 Beta vulgaris HOM05D002986 ORTHO05D003966 2.9e-08 63.2 39 66.7
ClCG05G013300 Citrullus lanatus HOM05D002986 ORTHO05D003966 3.8e-08 62.8 39 71.8
VMungo1309G1441 Vigna mungo HOM05D002986 ORTHO05D003966 3.8e-08 62.8 42 66.7
MELO3C014863.2 Cucumis melo HOM05D002986 ORTHO05D003966 4.9e-08 62.4 39 71.8
Sed0020837 Sechium edule HOM05D002986 ORTHO05D007611 4.9e-08 62.4 38 73.7
Prupe.2G106500 Prunus persica HOM05D002986 ORTHO05D003966 6.4e-08 62.0 42 64.3
TAR636G3678 Trochodendron aralioides HOM05D002986 ORTHO05D007611 9.3e-07 58.2 146 65.1


User provided reference genes

Program Settings