Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g06851_MAGBIO Magnolia biondii HOM05D006249 ORTHO05D007643 1.7e-196 689.1 344 100.0
TAR362G0606 Trochodendron aralioides HOM05D006249 ORTHO05D007643 7.7e-112 407.9 342 63.2
Thecc.01G267400 Theobroma cacao HOM05D006249 ORTHO05D007643 3.8e-111 405.6 315 63.5
CiPaw.03G257400 Carya illinoinensis HOM05D006249 ORTHO05D007643 2.5e-110 402.9 295 66.8
COL.COLO4_06075 Corchorus olitorius HOM05D006249 ORTHO05D007643 9.4e-110 401.0 315 62.2
Potri.005G218700 Populus trichocarpa HOM05D006249 ORTHO05D007643 2.1e-109 399.8 324 64.2
RcHm_v2.0_Chr6g0289561 Rosa chinensis HOM05D006249 ORTHO05D007643 3.6e-109 399.1 318 62.6
Ciclev10021257m.g Citrus clementina HOM05D006249 ORTHO05D007643 4.6e-109 398.7 305 65.2
CSS0046504 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 7.9e-109 397.9 346 59.0
Haze_24532 Corylus avellana HOM05D006249 ORTHO05D007643 2.0e-107 393.3 317 63.1
ClCG01G001850 Citrullus lanatus HOM05D006249 ORTHO05D007643 3.3e-107 392.5 334 60.2
Cpa.g.sc52.92 Carica papaya HOM05D006249 ORTHO05D007643 7.4e-107 391.3 319 61.8
CsaV3_5G002000 Cucumis sativus L. HOM05D006249 ORTHO05D007643 2.2e-106 389.8 334 59.3
FvH4_2g22511 Fragaria vesca HOM05D006249 ORTHO05D007643 2.2e-106 389.8 316 62.3
Sc17g0000990 Simmondsia chinensis HOM05D006249 ORTHO05D007643 2.8e-106 389.4 286 64.3
PGR044G2488 Punica granatum HOM05D006249 ORTHO05D007643 3.7e-106 389.0 336 59.8
Gohir.A11G127400 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.1e-105 387.5 337 57.6
Gorai.007G142000 Gossypium raimondii HOM05D006249 ORTHO05D007643 2.4e-105 386.3 337 57.9
MELO3C005753.2 Cucumis melo HOM05D006249 ORTHO05D007643 3.1e-105 386.0 334 59.3
Duzib138G0419 Durio zibethinus HOM05D006249 ORTHO05D007643 3.1e-105 386.0 310 61.0
Gohir.D11G132800 Gossypium hirsutum HOM05D006249 ORTHO05D007643 4.1e-105 385.6 337 57.6
Manes.05G084500 Manihot esculenta HOM05D006249 ORTHO05D007643 5.3e-105 385.2 336 59.8
Peaxi162Scf00049g00209 Petunia axillaris HOM05D006249 ORTHO05D007643 5.3e-105 385.2 314 62.1
GSVIVG01000723001 Vitis vinifera HOM05D006249 ORTHO05D007643 5.3e-105 385.2 342 59.4
Sopen09g027650 Solanum pennellii HOM05D006249 ORTHO05D007643 2.6e-104 382.9 304 63.5
Solyc09g065860.3 Solanum lycopersicum HOM05D006249 ORTHO05D007643 1.0e-103 380.9 304 63.2
MD05G1205700 Malus domestica HOM05D006249 ORTHO05D007643 1.3e-103 380.6 339 58.1
CANSAT01G0091 Cannabis sativa HOM05D006249 ORTHO05D007643 2.9e-103 379.4 288 63.9
Dinv34569 Davidia involucrata HOM05D006249 ORTHO05D007643 2.9e-103 379.4 340 58.5
Hund09572 Selenicereus undatus HOM05D006249 ORTHO05D007643 2.9e-103 379.4 320 60.3
ATR0665G572 Amborella trichopoda HOM05D006249 ORTHO05D007643 5.0e-103 378.6 335 57.9
QL12p042687 Quercus lobata HOM05D006249 ORTHO05D007643 6.5e-103 378.3 320 61.6
vmacro14872 Vaccinium macrocarpon HOM05D006249 ORTHO05D007643 2.5e-102 376.3 327 59.0
Nn1g02571 Nelumbo nucifera HOM05D006249 ORTHO05D007643 4.2e-102 375.6 334 59.3
Rhsim01G0269700 Rhododendron simsii HOM05D006249 ORTHO05D007643 5.5e-102 375.2 352 55.4
Atru.chr5.1566 Acer truncatum HOM05D006249 ORTHO05D007643 7.2e-102 374.8 271 67.2
Atru.chr5.1568 Acer truncatum HOM05D006249 ORTHO05D007643 7.2e-102 374.8 271 67.2
AUR62011941 Chenopodium quinoa HOM05D006249 ORTHO05D007643 1.6e-101 373.6 318 58.5
Prupe.8G232100 Prunus persica HOM05D006249 ORTHO05D007643 2.7e-101 372.9 317 59.9
CSS0032391 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 4.7e-101 372.1 327 58.4
Aqoxy2G03531 Aquilegia oxysepala HOM05D006249 ORTHO05D007643 2.3e-100 369.8 312 61.9
Eucgr.K03312 Eucalyptus grandis HOM05D006249 ORTHO05D007643 2.3e-100 369.8 306 59.8
CAN.G1259.4 Capsicum annuum HOM05D006249 ORTHO05D007643 3.0e-100 369.4 312 60.3
Aa31LG1G9510 Aethionema arabicum HOM05D006249 ORTHO05D007643 8.8e-100 367.9 285 62.1
Migut.D00374 Erythranthe guttata HOM05D006249 ORTHO05D007643 8.8e-100 367.9 333 55.6
PGSC0003DMG400019301 Solanum tuberosum HOM05D006249 ORTHO05D007643 1.1e-99 367.5 294 62.2
C05p01650 Brassica napus HOM05D006249 ORTHO05D007643 1.5e-99 367.1 323 57.6
AT1G03030 Arabidopsis thaliana HOM05D006249 ORTHO05D007643 2.0e-99 366.7 289 61.6
THA.LOC104801257 Tarenaya hassleriana HOM05D006249 ORTHO05D007643 2.6e-99 366.3 295 61.4
A10p01650 Brassica napus HOM05D006249 ORTHO05D007643 4.4e-99 365.5 291 61.2
Medtr7g096100 Medicago truncatula HOM05D006249 ORTHO05D007643 5.7e-99 365.2 344 55.2
Cc01_g18850 Coffea canephora HOM05D006249 ORTHO05D007643 7.4e-99 364.8 335 52.8
ECA248G0032 Erigeron canadensis HOM05D006249 ORTHO05D007643 7.4e-99 364.8 323 56.7
Carub.0001s0216 Capsella rubella HOM05D006249 ORTHO05D007643 9.7e-99 364.4 287 61.0
BcaC07g42289 Brassica carinata HOM05D006249 ORTHO05D007643 1.3e-98 364.0 296 60.5
BolC5t28944H Brassica oleracea HOM05D006249 ORTHO05D007643 1.3e-98 364.0 296 60.5
BraA10t42442Z Brassica rapa HOM05D006249 ORTHO05D007643 1.3e-98 364.0 291 60.8
CDE06G0138 Ceratophyllum demersum HOM05D006249 ORTHO05D007643 2.2e-98 363.2 335 56.1
TPR.G5717 Trifolium pratense HOM05D006249 ORTHO05D007643 2.8e-98 362.8 335 56.7
Lj1g0022179 Lotus japonicus HOM05D006249 ORTHO05D007643 3.7e-98 362.5 289 61.9
Nitab4.5_0001556g0120 Nicotiana tabacum HOM05D006249 ORTHO05D007643 6.3e-98 361.7 312 61.2
HanXRQChr01g0006841 Helianthus annuus HOM05D006249 ORTHO05D007643 1.1e-97 360.9 308 58.4
CARHR002370 Cardamine hirsuta HOM05D006249 ORTHO05D007643 2.4e-97 359.8 287 60.3
Psat3g061040 Pisum sativum HOM05D006249 ORTHO05D007643 7.0e-97 358.2 299 60.5
Glyma.19G161200 Glycine max HOM05D006249 ORTHO05D007643 1.2e-96 357.5 340 54.1
AL1G12480 Arabidopsis lyrata HOM05D006249 ORTHO05D007643 2.0e-96 356.7 271 64.6
Lj2C1159G1 Lonicera japonica HOM05D006249 ORTHO05D007643 2.0e-96 356.7 344 55.8
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 2.0e-96 356.7 297 58.9
Thhalv10008317m.g Eutrema salsugineum HOM05D006249 ORTHO05D007643 3.5e-96 355.9 281 61.6
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 4.5e-96 355.5 354 54.0
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 4.5e-96 355.5 354 54.0
Lsat_1_v5_gn_5_186740 Lactuca sativa HOM05D006249 ORTHO05D007643 3.8e-95 352.4 288 59.0
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 4.2e-94 349.0 311 58.2
MSTRG.21512 Avicennia marina HOM05D006249 ORTHO05D007643 1.6e-93 347.1 308 56.8
SalBow4G2323 Salvia bowleyana HOM05D006249 ORTHO05D007643 4.0e-92 342.4 309 55.7
arahy.Tifrunner.gnm1.ann1.EN4NAA Arachis hypogaea HOM05D006249 ORTHO05D007643 5.2e-92 342.0 320 55.9
Lalb_Chr25g0290111 Lupinus albus HOM05D006249 ORTHO05D007643 8.8e-92 341.3 276 61.6
arahy.Tifrunner.gnm1.ann1.3ZGG11 Arachis hypogaea HOM05D006249 ORTHO05D007643 1.5e-91 340.5 320 55.9
Oeu018173.1 Olea europaea HOM05D006249 ORTHO05D007643 3.3e-91 339.3 304 55.9
Nitab4.5_0000187g0200 Nicotiana tabacum HOM05D006249 ORTHO05D007643 2.2e-90 336.7 269 63.9
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 2.2e-90 336.7 324 57.4
Os12g0601200 Oryza sativa ssp. japonica HOM05D006249 ORTHO05D007643 3.7e-90 335.9 295 56.3
PSO832G1981 Papaver somniferum HOM05D006249 ORTHO05D007643 2.4e-89 333.2 344 52.9
TWI18G0435 Tripterygium wilfordii HOM05D006249 ORTHO05D007643 4.1e-89 332.4 293 59.0
PSO210G4763 Papaver somniferum HOM05D006249 ORTHO05D007643 2.7e-88 329.7 305 56.4
Zm00001eb135540 Zea mays HOM05D006249 ORTHO05D007643 7.7e-88 328.2 286 57.3
HPP92_012490 Vanilla planifolia HOM05D006249 ORTHO05D007643 1.0e-87 327.8 292 55.5
Sed0010412 Sechium edule HOM05D006249 ORTHO05D007643 3.6e-85 319.3 296 56.4
Ah.02g111470 Amaranthus hybridus HOM05D006249 ORTHO05D007643 4.7e-85 318.9 319 53.3
AUR62032256 Chenopodium quinoa HOM05D006249 ORTHO05D007643 3.1e-81 306.2 318 51.3
BcaC07g42286 Brassica carinata HOM05D006249 ORTHO05D007643 7.7e-80 301.6 320 50.3
Mapoly0096s0074 Marchantia polymorpha HOM05D006249 ORTHO05D007643 3.0e-76 289.7 353 46.2
BcaC07g42292 Brassica carinata HOM05D006249 ORTHO05D007643 8.3e-74 281.6 311 51.4
Pp3c17_16800 Physcomitrium patens HOM05D006249 ORTHO05D007643 1.9e-70 270.4 315 46.3
Phvul.001G156700 Phaseolus vulgaris HOM05D006249 ORTHO05D007643 8.9e-68 261.5 281 51.6
Medtr4g076080 Medicago truncatula HOM05D006249 ORTHO05D007643 1.7e-66 257.3 303 47.5
unitig_0.g1129 Utricularia gibba HOM05D006249 ORTHO05D007643 3.2e-65 253.1 219 58.9
Actinidia21156 Actinidia chinensis HOM05D006249 ORTHO05D007643 1.2e-64 251.1 288 49.0
AagrBONN_evm.TU.Sc2ySwM_228.3891 Anthoceros agrestis HOM05D006249 ORTHO05D007643 1.7e-63 247.3 249 52.2
EL10Ac5g10475 Beta vulgaris HOM05D006249 ORTHO05D007643 1.7e-63 247.3 190 62.1
SEGI_12640 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 1.5e-62 244.2 209 57.9
RcHm_v2.0_Chr4g0397901 Rosa chinensis HOM05D006249 ORTHO05D007643 4.6e-56 222.6 217 54.4
SMO358G0282 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 3.9e-47 193.0 210 49.5
Cre02.g101000 Chlamydomonas reinhardtii HOM05D006249 ORTHO05D007643 1.2e-43 181.4 285 36.8
MCO14G208 Micromonas commoda HOM05D006249 ORTHO05D007643 1.2e-40 171.4 277 37.2
arahy.Tifrunner.gnm1.ann1.U7WVQR Arachis hypogaea HOM05D006249 ORTHO05D007643 1.7e-34 151.0 237 40.1
CBR_g19145 Chara braunii HOM05D006249 ORTHO05D007643 1.4e-33 147.9 196 43.9
Sp1g02020 Schrenkiella parvula HOM05D006249 ORTHO05D007643 5.4e-33 146.0 128 56.2
Oeu018171.1 Olea europaea HOM05D006249 ORTHO05D007643 3.5e-32 143.3 113 62.8
Hund30725 Selenicereus undatus HOM05D006249 ORTHO05D007643 5.1e-31 139.4 117 60.7
Ca_15970_v3 Cicer arietinum L. HOM05D006249 ORTHO05D007643 6.6e-31 139.0 107 59.8
Medtr8g064430 Medicago truncatula HOM05D006249 ORTHO05D007643 1.9e-30 137.5 92 69.6
Hund30696 Selenicereus undatus HOM05D006249 ORTHO05D007643 1.1e-28 131.7 117 58.1
Glyma.03G158766 Glycine max HOM05D006249 ORTHO05D007643 2.4e-28 130.6 94 69.1
arahy.Tifrunner.gnm1.ann1.FBQK8B Arachis hypogaea HOM05D006249 ORTHO05D007643 1.6e-21 107.8 158 39.9
arahy.Tifrunner.gnm1.ann1.AHQ53Z Arachis hypogaea HOM05D006249 ORTHO05D007643 2.8e-21 107.1 158 39.2
Glyma.03G158832 Glycine max HOM05D006249 ORTHO05D007643 6.2e-21 105.9 65 72.3
Cfa022768 Carpinus fangiana HOM05D006249 ORTHO05D007643 6.9e-20 102.4 184 34.8
CSS0005124 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 9.9e-19 98.6 57 77.2
PRCOL_00003971 Prasinoderma coloniale HOM05D006249 ORTHO05D007643 4.9e-18 96.3 192 33.9
SHI29847 Sapria himalayana HOM05D006249 ORTHO05D007643 7.4e-14 82.4 178 33.1
SHI34902 Sapria himalayana HOM05D006249 ORTHO05D007643 8.1e-13 79.0 182 30.8
SHI16544 Sapria himalayana HOM05D006249 ORTHO05D007643 2.2e-10 70.9 116 36.2
SHI29011 Sapria himalayana HOM05D006249 ORTHO05D007643 1.1e-09 68.6 73 47.9
SHI36883 Sapria himalayana HOM05D006249 ORTHO05D007643 1.9e-09 67.8 56 50.0
SHI34501 Sapria himalayana HOM05D006249 ORTHO05D007643 2.5e-09 67.4 98 40.8
SEGI_29111 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 1.8e-07 61.2 41 63.4
SHI31647 Sapria himalayana HOM05D006249 ORTHO05D007643 5.1e-07 59.7 61 45.9
SHI49503 Sapria himalayana HOM05D000624 ORTHO05D000495 6.7e-07 59.3 60 55.0
SHI04506 Sapria himalayana HOM05D006249 ORTHO05D007643 4.3e-06 56.6 55 47.3


User provided reference genes

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