Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 3.1e-116 421.8 211 100.0
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 8.1e-80 300.8 188 79.3
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 5.2e-79 298.1 188 78.2
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 2.0e-78 296.2 188 78.2
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 3.4e-78 295.4 188 77.7
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 4.4e-78 295.0 185 78.9
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 5.8e-78 294.7 182 78.6
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 5.8e-78 294.7 188 76.6
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 5.8e-78 294.7 188 78.2
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 7.6e-78 294.3 194 76.3
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 9.9e-78 293.9 182 79.7
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 9.9e-78 293.9 188 77.7
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 1.7e-77 293.1 188 76.1
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 2.2e-77 292.7 185 77.3
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 2.9e-77 292.4 185 77.8
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 6.4e-77 291.2 176 81.8
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 1.1e-76 290.4 188 76.1
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 1.4e-76 290.0 169 83.4
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 1.4e-76 290.0 188 77.1
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 1.4e-76 290.0 188 76.1
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 1.9e-76 289.7 188 76.1
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 2.4e-76 289.3 211 69.2
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 3.2e-76 288.9 188 76.6
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 3.2e-76 288.9 188 75.0
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 7.1e-76 287.7 182 78.0
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 9.3e-76 287.3 188 77.1
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 9.3e-76 287.3 176 80.1
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 2.1e-75 286.2 179 79.3
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 2.7e-75 285.8 185 76.2
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 3.5e-75 285.4 187 75.4
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 7.8e-75 284.3 187 74.3
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 7.8e-75 284.3 185 75.1
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 7.8e-75 284.3 188 73.4
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 1.0e-74 283.9 188 75.0
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.0e-74 283.9 185 75.7
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 1.7e-74 283.1 188 74.5
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 3.0e-74 282.3 188 74.5
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 3.9e-74 282.0 188 73.9
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 5.1e-74 281.6 184 73.9
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 5.1e-74 281.6 189 73.5
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 6.6e-74 281.2 186 74.7
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 1.1e-73 280.4 188 76.1
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 1.9e-73 279.6 175 77.1
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 1.9e-73 279.6 188 72.3
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 4.3e-73 278.5 182 73.1
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 9.6e-73 277.3 179 76.0
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 2.1e-72 276.2 173 79.2
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 2.8e-72 275.8 188 72.9
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 2.8e-72 275.8 188 72.9
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 3.6e-72 275.4 183 74.3
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 3.6e-72 275.4 184 73.4
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 6.2e-72 274.6 188 73.4
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 1.1e-71 273.9 188 73.4
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 1.4e-71 273.5 188 72.3
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.4e-71 272.7 184 73.4
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 2.4e-71 272.7 182 75.3
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 3.1e-71 272.3 181 74.6
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 1.2e-70 270.4 179 74.3
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 1.2e-70 270.4 181 75.1
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 1.5e-70 270.0 182 70.9
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 2.0e-70 269.6 182 73.1
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 2.6e-70 269.2 188 70.7
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 3.4e-70 268.9 188 71.3
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 4.4e-70 268.5 175 74.9
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 9.9e-70 267.3 182 70.3
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 1.3e-69 266.9 189 71.4
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 2.2e-69 266.2 189 72.0
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 2.9e-69 265.8 188 72.3
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 4.9e-69 265.0 163 81.0
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 1.9e-68 263.1 189 70.4
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 2.4e-68 262.7 188 69.7
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 7.1e-68 261.2 176 73.9
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 9.3e-68 260.8 189 69.8
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 1.6e-67 260.0 162 80.2
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 2.1e-67 259.6 185 69.2
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 6.0e-67 258.1 173 71.7
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 7.9e-67 257.7 185 71.4
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.0e-66 257.3 162 79.6
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 1.0e-66 257.3 163 76.1
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 3.9e-66 255.4 189 67.7
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 3.9e-66 255.4 183 69.4
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 6.6e-66 254.6 188 66.5
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 8.7e-66 254.2 163 76.7
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.5e-65 253.4 187 71.1
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 1.5e-65 253.4 186 68.8
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 3.3e-65 252.3 189 66.7
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 3.3e-65 252.3 183 68.3
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 4.3e-65 251.9 165 75.2
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 5.6e-65 251.5 182 68.7
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 5.6e-65 251.5 188 65.4
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 7.3e-65 251.1 165 73.9
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 7.3e-65 251.1 173 74.0
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 9.6e-65 250.8 185 69.2
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 2.8e-64 249.2 191 67.0
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 2.8e-64 249.2 162 77.8
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 1.8e-63 246.5 193 65.3
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 1.8e-63 246.5 167 73.1
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 4.0e-63 245.4 162 73.5
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 9.0e-63 244.2 166 75.3
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 2.6e-62 242.7 167 71.9
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 5.8e-62 241.5 162 77.2
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 5.8e-62 241.5 142 81.0
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 7.6e-62 241.1 142 83.1
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 9.9e-62 240.7 160 75.6
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 1.3e-61 240.4 161 69.6
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 1.4e-60 236.9 182 63.2
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 4.6e-59 231.9 184 63.0
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 1.0e-58 230.7 182 62.1
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 3.0e-58 229.2 187 59.9
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 3.9e-58 228.8 182 59.9
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 5.1e-58 228.4 165 68.5
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 5.6e-57 224.9 162 68.5
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 6.2e-56 221.5 162 68.5
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 1.2e-54 217.2 183 62.8
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 1.2e-54 217.2 188 58.0
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 1.5e-54 216.9 182 63.2
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 4.5e-54 215.3 181 62.4
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 4.5e-54 215.3 187 59.4
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 5.5e-52 208.4 141 74.5
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 1.2e-51 207.2 185 56.2
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 2.7e-51 206.1 182 57.1
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 3.5e-51 205.7 162 63.6
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 3.0e-50 202.6 188 56.4
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 8.7e-50 201.1 120 84.2
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 5.7e-49 198.4 125 79.2
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 2.4e-47 193.0 191 51.8
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 4.6e-43 178.7 125 68.0
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 6.1e-43 178.3 185 53.5
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 2.6e-38 162.9 114 71.1
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 7.7e-38 161.4 174 46.6
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 2.9e-37 159.5 110 71.8
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 3.3e-33 146.0 155 54.8
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 3.3e-33 146.0 125 55.2
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 1.5e-25 120.6 117 56.4
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 9.1e-15 84.7 60 68.3
Atru.chr1.3414 Acer truncatum HOM05D005658 ORTHO05D006989 4.1e-07 59.3 47 61.7
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 2.7e-06 56.6 144 27.8
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 4.5e-06 55.8 144 29.2
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 5.9e-06 55.5 144 29.2
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 7.7e-06 55.1 147 29.3


User provided reference genes

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