Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g04803_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.4e-72 276.2 137 100.0
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.3e-19 99.4 106 55.7
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 1.9e-13 79.7 89 48.3
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.6e-12 76.6 68 58.8
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 2.1e-12 76.3 101 44.6
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.0e-11 72.4 76 55.3
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 3.0e-11 72.4 76 55.3
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 6.8e-11 71.2 68 57.4
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 1.2e-10 70.5 68 55.9
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 1.5e-10 70.1 68 52.9
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 2.0e-10 69.7 106 42.5
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 4.4e-10 68.6 76 53.9
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 5.7e-10 68.2 62 54.8
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 7.5e-10 67.8 68 57.4
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 9.8e-10 67.4 106 42.5
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 1.7e-09 66.6 106 40.6
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 2.2e-09 66.2 106 41.5
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 3.7e-09 65.5 76 51.3
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 4.8e-09 65.1 106 40.6
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 6.3e-09 64.7 106 40.6
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 6.3e-09 64.7 61 59.0
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 8.3e-09 64.3 63 54.0
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 8.3e-09 64.3 106 40.6
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 1.8e-08 63.2 75 46.7
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 2.4e-08 62.8 62 53.2
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 3.1e-08 62.4 62 54.8
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 4.1e-08 62.0 55 56.4
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.0e-08 61.2 76 48.7
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 9.1e-08 60.8 94 39.4
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 2.0e-07 59.7 106 37.7
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 2.7e-07 59.3 107 37.4
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 2.7e-07 59.3 67 50.7
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 3.5e-07 58.9 106 38.7
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 4.5e-07 58.5 132 33.3
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 5.9e-07 58.2 101 38.6
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 5.9e-07 58.2 89 44.9
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.3e-06 57.0 76 47.4
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 1.3e-06 57.0 100 39.0
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 1.3e-06 57.0 60 53.3
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 1.7e-06 56.6 106 36.8
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 2.3e-06 56.2 106 38.7
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 2.3e-06 56.2 68 45.6
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 2.3e-06 56.2 132 31.1
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 2.9e-06 55.8 106 37.7
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 2.9e-06 55.8 68 50.0
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 2.9e-06 55.8 94 39.4
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 2.9e-06 55.8 106 36.8
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 3.8e-06 55.5 60 53.3
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 3.8e-06 55.5 60 53.3
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 6.6e-06 54.7 68 47.1
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 8.6e-06 54.3 60 51.7
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 8.6e-06 54.3 81 40.7


User provided reference genes

Program Settings