Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 6.4e-42 173.7 90 100.0
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 77.8
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 2.9e-34 148.3 90 77.8
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 2.9e-34 148.3 90 78.9
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 3.7e-34 147.9 90 77.8
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 3.7e-34 147.9 90 77.8
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 3.7e-34 147.9 90 77.8
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 77.8
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 76.7
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 75.6
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.4e-33 146.0 90 76.7
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 1.4e-33 146.0 90 76.7
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.4e-33 146.0 87 78.2
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 76.7
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 75.6
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 75.6
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 75.6
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 3.2e-33 144.8 87 77.0
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 74.4
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 75.6
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 75.6
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 9.2e-33 143.3 88 75.0
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 75.6
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 76.7
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 72.2
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 2.1e-32 142.1 86 76.7
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 73.3
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 77.8
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 72.2
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 6.0e-32 140.6 89 79.8
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 75.6
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 75.6
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 74.4
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 75.6
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 75.6
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 74.4
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 74.4
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 74.4
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.3e-31 139.4 97 73.2
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 74.4
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 75.6
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 74.4
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 72.2
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 73.3
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 3.0e-31 138.3 91 76.9
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 3.0e-31 138.3 91 76.9
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 3.0e-31 138.3 91 76.9
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 3.0e-31 138.3 87 71.3
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 3.0e-31 138.3 87 71.3
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.0e-31 138.3 86 76.7
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 72.2
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 3.0e-31 138.3 87 72.4
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 5.1e-31 137.5 90 73.3
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 5.1e-31 137.5 90 72.2
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 5.1e-31 137.5 90 71.1
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 89 71.9
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 71.1
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 8.6e-31 136.7 89 76.4
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.1e-30 136.3 87 69.0
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.1e-30 136.3 88 75.0
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 72.2
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 74.4
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 74.4
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 73.3
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 74.4
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 70.0
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 2.5e-30 135.2 87 71.3
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 87 71.3
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 4.3e-30 134.4 88 69.3
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 74.4
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 4.3e-30 134.4 87 71.3
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 4.3e-30 134.4 88 72.7
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 71.1
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 5.6e-30 134.0 90 68.9
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 5.6e-30 134.0 90 72.2
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 71.6
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 7.3e-30 133.7 87 70.1
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 72.2
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 9.5e-30 133.3 88 70.5
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 71.1
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 1.2e-29 132.9 88 73.9
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 68.9
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.8e-29 131.7 90 70.0
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 71.1
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 70.0
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 4.7e-29 131.0 88 68.2
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 65.6
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.1e-28 129.8 90 68.9
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.4e-28 129.4 84 71.4
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 1.8e-28 129.0 94 71.3
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 3.1e-28 128.3 100 61.0
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 1.5e-27 125.9 86 66.3
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 2.0e-27 125.6 89 66.3
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 2.0e-27 125.6 87 71.3
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 2.6e-27 125.2 88 65.9
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 3.4e-27 124.8 90 67.8
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 4.9e-26 120.9 124 54.8
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 7.1e-25 117.1 84 65.5
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 2.1e-24 115.5 76 68.4
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 6.0e-24 114.0 86 67.4
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 6.0e-24 114.0 97 58.8
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 7.8e-24 113.6 86 66.3
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.0e-23 113.2 70 74.3
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.7e-23 112.5 70 72.9
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 5.1e-23 110.9 65 80.0
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 2.5e-22 108.6 62 80.6
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 4.3e-22 107.8 70 70.0
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 5.6e-22 107.5 69 69.6
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.1e-20 103.2 71 70.4
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 2.4e-20 102.1 63 74.6
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 4.0e-20 101.3 79 62.0
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 4.0e-20 101.3 72 70.8
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.5e-19 99.4 69 65.2
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.5e-19 99.4 65 75.4
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 7.6e-19 97.1 89 58.4
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.3e-18 96.3 55 80.0
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.7e-16 88.6 51 82.4
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.3e-15 85.5 80 57.5
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.3e-15 85.5 77 57.1
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.1e-13 79.0 89 49.4
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 2.1e-13 79.0 93 46.2
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 1.3e-10 69.7 53 66.0
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.9e-09 65.9 47 66.0
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 3.3e-06 55.1 33 72.7


User provided reference genes

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