Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g34513_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 0.0e+00 1105.1 588 100.0
TAR374G0165 Trochodendron aralioides HOM05D003568 ORTHO05D004104 1.6e-255 885.9 536 87.3
GSVIVG01026964001 Vitis vinifera HOM05D003568 ORTHO05D004104 3.1e-254 881.7 541 86.3
MELO3C006082.2 Cucumis melo HOM05D003568 ORTHO05D004104 4.0e-254 881.3 540 86.3
Aqoxy2G00934 Aquilegia oxysepala HOM05D003568 ORTHO05D004104 7.6e-253 877.1 536 86.4
CsaV3_3G008620 Cucumis sativus L. HOM05D003568 ORTHO05D004104 9.9e-253 876.7 536 86.6
Sed0000810 Sechium edule HOM05D003568 ORTHO05D004104 1.7e-252 875.9 540 85.9
Nn1g01682 Nelumbo nucifera HOM05D003568 ORTHO05D004104 2.9e-252 875.2 541 86.3
ClCG05G001260 Citrullus lanatus HOM05D003568 ORTHO05D004104 8.4e-252 873.6 551 84.8
Duzib205G0971 Durio zibethinus HOM05D003568 ORTHO05D004104 8.4e-252 873.6 540 86.3
Potri.002G164100 Populus trichocarpa HOM05D003568 ORTHO05D004104 1.9e-251 872.5 537 86.4
Duzib068G0821 Durio zibethinus HOM05D003568 ORTHO05D004104 3.2e-251 871.7 540 85.9
Prupe.2G177200 Prunus persica HOM05D003568 ORTHO05D004104 5.5e-251 870.9 540 85.7
Gohir.D12G276500 Gossypium hirsutum HOM05D003568 ORTHO05D004104 2.7e-250 868.6 540 85.4
Gorai.008G297000 Gossypium raimondii HOM05D003568 ORTHO05D004104 2.7e-250 868.6 540 85.4
QL04p055468 Quercus lobata HOM05D003568 ORTHO05D004104 2.7e-250 868.6 536 85.4
Thecc.06G000300 Theobroma cacao HOM05D003568 ORTHO05D004104 3.5e-250 868.2 540 85.4
Potri.014G090100 Populus trichocarpa HOM05D003568 ORTHO05D004104 1.0e-249 866.7 540 85.4
CSS0027239 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 3.0e-249 865.1 540 84.8
Ciclev10018853m.g Citrus clementina HOM05D003568 ORTHO05D004104 3.9e-249 864.8 540 84.8
Gohir.A12G275800 Gossypium hirsutum HOM05D003568 ORTHO05D004104 5.1e-249 864.4 540 85.0
MD01G1071200 Malus domestica HOM05D003568 ORTHO05D004104 1.1e-248 863.2 540 84.4
TWI59G1008 Tripterygium wilfordii HOM05D003568 ORTHO05D004104 2.5e-248 862.1 536 85.8
CiPaw.02G034600 Carya illinoinensis HOM05D003568 ORTHO05D004104 4.3e-248 861.3 540 84.4
Atru.chr5.579 Acer truncatum HOM05D003568 ORTHO05D004104 7.4e-248 860.5 536 84.7
PGR042G3260 Punica granatum HOM05D003568 ORTHO05D004104 7.4e-248 860.5 536 84.9
Thecc.03G000600 Theobroma cacao HOM05D003568 ORTHO05D004104 9.6e-248 860.1 540 85.0
Manes.05G029701 Manihot esculenta HOM05D003568 ORTHO05D004104 4.8e-247 857.8 540 84.4
CANSAT56G2290 Cannabis sativa HOM05D003568 ORTHO05D004104 6.2e-247 857.4 540 84.4
Manes.01G252500 Manihot esculenta HOM05D003568 ORTHO05D004104 3.1e-246 855.1 540 85.0
Eucgr.E00099 Eucalyptus grandis HOM05D003568 ORTHO05D004104 9.0e-246 853.6 540 83.3
FAN03G0275 Fragaria x ananassa HOM05D003568 ORTHO05D004104 9.0e-246 853.6 540 83.5
RcHm_v2.0_Chr1g0357661 Rosa chinensis HOM05D003568 ORTHO05D004104 1.2e-245 853.2 540 83.3
FvH4_7g15330 Fragaria vesca HOM05D003568 ORTHO05D004104 2.0e-245 852.4 540 83.3
FAN06G0334 Fragaria x ananassa HOM05D003568 ORTHO05D004104 2.0e-245 852.4 540 83.3
FAN01G2394 Fragaria x ananassa HOM05D003568 ORTHO05D004104 2.6e-245 852.0 540 83.3
Cpa.g.sc184.32 Carica papaya HOM05D003568 ORTHO05D004104 1.0e-244 850.1 536 84.9
FAN06G4614 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.7e-244 849.4 540 83.1
Sabra14G0065400 Salix brachista HOM05D003568 ORTHO05D004104 2.2e-244 849.0 551 82.6
vmacro13231 Vaccinium macrocarpon HOM05D003568 ORTHO05D004104 3.8e-244 848.2 552 80.1
Atru.chr5.561 Acer truncatum HOM05D003568 ORTHO05D004104 6.5e-244 847.4 559 81.2
PSO478G3452 Papaver somniferum HOM05D003568 ORTHO05D004104 1.1e-243 846.7 540 83.0
MD07G1131500 Malus domestica HOM05D003568 ORTHO05D004104 3.2e-243 845.1 540 83.3
THA.LOC104811828 Tarenaya hassleriana HOM05D003568 ORTHO05D004104 3.2e-243 845.1 536 83.4
PSO266G0033 Papaver somniferum HOM05D003568 ORTHO05D004104 7.1e-243 844.0 540 82.8
FAN10G2647 Fragaria x ananassa HOM05D003568 ORTHO05D004104 9.3e-243 843.6 540 82.8
ATR0829G125 Amborella trichopoda HOM05D003568 ORTHO05D004104 3.5e-242 841.6 536 82.8
Sabra02G0147000 Salix brachista HOM05D003568 ORTHO05D004104 1.8e-241 839.3 581 76.8
Sc03g0008850 Simmondsia chinensis HOM05D003568 ORTHO05D004104 3.9e-241 838.2 541 82.3
Peaxi162Scf00073g02118 Petunia axillaris HOM05D003568 ORTHO05D004104 1.9e-240 835.9 540 82.4
Medtr8g023330 Medicago truncatula HOM05D003568 ORTHO05D004104 2.5e-240 835.5 536 82.6
Glyma.07G046100 Glycine max HOM05D003568 ORTHO05D004104 3.3e-240 835.1 536 82.5
SGA_v2.0_scaffold67G22717 Striga asiatica HOM05D003568 ORTHO05D004104 5.7e-240 834.3 540 82.8
Aa31LG3G14860 Aethionema arabicum HOM05D003568 ORTHO05D004104 4.8e-239 831.2 536 82.8
Oeu015218.3 Olea europaea HOM05D003568 ORTHO05D004104 6.3e-239 830.9 540 82.6
Lalb_Chr18g0044861 Lupinus albus HOM05D003568 ORTHO05D004104 8.2e-239 830.5 540 81.7
Lj3g0009129 Lotus japonicus HOM05D003568 ORTHO05D004104 1.4e-238 829.7 538 83.1
Sed0017270 Sechium edule HOM05D003568 ORTHO05D004104 1.4e-238 829.7 540 82.0
COL.COLO4_15385 Corchorus olitorius HOM05D003568 ORTHO05D004104 4.1e-238 828.2 536 82.8
HPP92_003241 Vanilla planifolia HOM05D003568 ORTHO05D004104 6.9e-238 827.4 529 81.5
Nitab4.5_0000171g0380 Nicotiana tabacum HOM05D003568 ORTHO05D004104 9.0e-238 827.0 540 81.7
TAR375G0541 Trochodendron aralioides HOM05D003568 ORTHO05D004104 9.0e-238 827.0 548 81.4
CARHR200740 Cardamine hirsuta HOM05D003568 ORTHO05D004104 2.6e-237 825.5 536 81.7
Ca_23448_v3 Cicer arietinum L. HOM05D003568 ORTHO05D004104 2.6e-237 825.5 536 82.3
Sp6g31270 Schrenkiella parvula HOM05D003568 ORTHO05D004104 7.7e-237 823.9 536 81.9
Carub.0006s1087 Capsella rubella HOM05D003568 ORTHO05D004104 2.2e-236 822.4 536 81.2
Phvul.010G123000 Phaseolus vulgaris HOM05D003568 ORTHO05D004104 2.2e-236 822.4 536 80.8
VMungo0331G1030 Vigna mungo HOM05D003568 ORTHO05D004104 2.2e-236 822.4 538 80.5
Cc08_g01740 Coffea canephora HOM05D003568 ORTHO05D004104 2.9e-236 822.0 540 81.7
AL6G23170 Arabidopsis lyrata HOM05D003568 ORTHO05D004104 3.8e-236 821.6 536 81.5
SEGI_32899 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 4.2e-235 818.1 539 80.3
AUR62030738 Chenopodium quinoa HOM05D003568 ORTHO05D004104 5.5e-235 817.8 546 79.5
EL10Ac5g12970 Beta vulgaris HOM05D003568 ORTHO05D004104 7.2e-235 817.4 536 79.9
Migut.N01148 Erythranthe guttata HOM05D003568 ORTHO05D004104 7.2e-235 817.4 536 81.5
Thhalv10012686m.g Eutrema salsugineum HOM05D003568 ORTHO05D004104 9.4e-235 817.0 536 81.0
CDE07G1174 Ceratophyllum demersum HOM05D003568 ORTHO05D004104 2.1e-234 815.8 517 83.8
Sed0024683 Sechium edule HOM05D003568 ORTHO05D004104 7.9e-234 813.9 540 79.8
CSS0021365 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 1.0e-233 813.5 540 78.7
PGSC0003DMG400005252 Solanum tuberosum HOM05D003568 ORTHO05D004104 1.8e-233 812.8 540 80.7
BolC9t59286H Brassica oleracea HOM05D003568 ORTHO05D004104 2.3e-233 812.4 544 80.5
arahy.Tifrunner.gnm1.ann1.Z56S5U Arachis hypogaea HOM05D003568 ORTHO05D004104 3.9e-233 811.6 538 81.0
A10p25450 Brassica napus HOM05D003568 ORTHO05D004104 3.9e-233 811.6 536 80.8
C09p64520 Brassica napus HOM05D003568 ORTHO05D004104 3.9e-233 811.6 544 80.5
BraA10t44609Z Brassica rapa HOM05D003568 ORTHO05D004104 3.9e-233 811.6 536 80.8
CAN.G165.6 Capsicum annuum HOM05D003568 ORTHO05D004104 3.9e-233 811.6 540 80.6
CSS0044044 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 5.1e-233 811.2 540 78.5
Rhsim07G0010700 Rhododendron simsii HOM05D003568 ORTHO05D004104 5.1e-233 811.2 635 69.9
BcaB01g05405 Brassica carinata HOM05D003568 ORTHO05D004104 1.5e-232 809.7 536 80.8
AT5G12370 Arabidopsis thaliana HOM05D003568 ORTHO05D004104 2.0e-232 809.3 536 80.6
Solyc03g095410.3 Solanum lycopersicum HOM05D003568 ORTHO05D004104 3.3e-232 808.5 540 80.6
Zm00001eb133590 Zea mays HOM05D003568 ORTHO05D004104 4.3e-232 808.1 540 76.3
MSTRG.27756 Avicennia marina HOM05D003568 ORTHO05D004104 5.7e-232 807.7 536 78.5
HanXRQChr04g0120781 Helianthus annuus HOM05D003568 ORTHO05D004104 5.7e-232 807.7 541 80.6
Glyma.16G014200 Glycine max HOM05D003568 ORTHO05D004104 7.4e-232 807.4 529 81.1
C03p06540 Brassica napus HOM05D003568 ORTHO05D004104 4.8e-231 804.7 536 79.9
DCAR_006948 Daucus carota HOM05D003568 ORTHO05D004104 6.3e-231 804.3 541 79.9
arahy.Tifrunner.gnm1.ann1.PRYL24 Arachis hypogaea HOM05D003568 ORTHO05D004104 1.8e-230 802.7 538 80.9
Gorai.006G064200 Gossypium raimondii HOM05D003568 ORTHO05D004104 1.8e-230 802.7 536 78.4
BolC3t13154H Brassica oleracea HOM05D003568 ORTHO05D004104 2.4e-230 802.4 536 79.7
Lalb_Chr17g0343201 Lupinus albus HOM05D003568 ORTHO05D004104 3.1e-230 802.0 538 77.3
Os12g0238100 Oryza sativa ssp. japonica HOM05D003568 ORTHO05D004104 3.1e-230 802.0 540 75.6
Sopen03g025390 Solanum pennellii HOM05D003568 ORTHO05D004104 5.3e-230 801.2 540 80.0
ECA236G4463 Erigeron canadensis HOM05D003568 ORTHO05D004104 9.1e-230 800.4 541 79.9
A03p05590 Brassica napus HOM05D003568 ORTHO05D004104 2.0e-229 799.3 536 79.7
BraA03t09896Z Brassica rapa HOM05D003568 ORTHO05D004104 2.0e-229 799.3 536 79.7
Gohir.D09G046200 Gossypium hirsutum HOM05D003568 ORTHO05D004104 2.0e-229 799.3 536 78.2
AUR62036376 Chenopodium quinoa HOM05D003568 ORTHO05D004104 5.9e-229 797.7 544 78.1
Nn6g35074 Nelumbo nucifera HOM05D003568 ORTHO05D004104 2.3e-225 785.8 519 80.5
Haze_15562 Corylus avellana HOM05D003568 ORTHO05D004104 4.4e-224 781.6 636 69.2
Hund23292 Selenicereus undatus HOM05D003568 ORTHO05D004104 1.1e-222 776.9 536 76.9
unitig_21.g20340 Utricularia gibba HOM05D003568 ORTHO05D004104 2.9e-220 768.8 540 75.0
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 1.3e-215 753.4 536 76.5
Sopen11g021810 Solanum pennellii HOM05D003568 ORTHO05D004104 1.1e-211 740.3 532 74.1
Lj9A588G62 Lonicera japonica HOM05D003568 ORTHO05D004104 1.5e-211 740.0 536 74.1
Lj7A507T47 Lonicera japonica HOM05D003568 ORTHO05D004104 4.7e-210 734.9 565 71.5
SalBow6G0922 Salvia bowleyana HOM05D003568 ORTHO05D004104 6.1e-210 734.6 541 70.6
SalBow6G4826 Salvia bowleyana HOM05D003568 ORTHO05D004104 6.1e-210 734.6 541 70.6
Dinv27398 Davidia involucrata HOM05D003568 ORTHO05D004104 5.7e-208 728.0 453 85.2
Peaxi162Scf00154g00427 Petunia axillaris HOM05D003568 ORTHO05D004104 4.8e-207 724.9 578 69.0
Nitab4.5_0010629g0020 Nicotiana tabacum HOM05D003568 ORTHO05D004104 5.3e-206 721.5 539 73.8
Lsat_1_v5_gn_7_3960 Lactuca sativa HOM05D003568 ORTHO05D004104 6.3e-199 698.0 541 72.3
AagrBONN_evm.TU.Sc2ySwM_117.807 Anthoceros agrestis HOM05D003568 ORTHO05D004104 1.1e-198 697.2 538 69.0
Hund02118 Selenicereus undatus HOM05D003568 ORTHO05D004104 1.6e-194 683.3 514 71.8
Psat4g164920 Pisum sativum HOM05D003568 ORTHO05D004104 1.0e-193 680.6 537 71.5
HanXRQChr02g0038861 Helianthus annuus HOM05D003568 ORTHO05D004104 4.0e-193 678.7 538 66.9
ECA238G2843 Erigeron canadensis HOM05D003568 ORTHO05D004104 8.9e-193 677.6 536 68.7
HanXRQChr13g0415591 Helianthus annuus HOM05D003568 ORTHO05D004104 1.2e-192 677.2 538 66.9
Lsat_1_v5_gn_3_138540 Lactuca sativa HOM05D003568 ORTHO05D004104 1.2e-192 677.2 545 66.1
Mapoly0070s0084 Marchantia polymorpha HOM05D003568 ORTHO05D004104 5.4e-190 668.3 548 65.9
Sopen10g009070 Solanum pennellii HOM05D003568 ORTHO05D004104 4.3e-187 658.7 530 71.3
CAN.G45.13 Capsicum annuum HOM05D003568 ORTHO05D004104 1.5e-184 650.2 462 77.5
SMO329G0014 Selaginella moellendorffii HOM05D003568 ORTHO05D004104 7.3e-179 631.3 557 61.2
Gohir.A09G045200 Gossypium hirsutum HOM05D003568 ORTHO05D004104 2.1e-178 629.8 435 77.0
Solyc11g050710.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 8.3e-175 617.8 483 71.6
Oeu036591.1 Olea europaea HOM05D003568 ORTHO05D004104 6.6e-172 608.2 540 64.1
Nitab4.5_0006926g0010 Nicotiana tabacum HOM05D003568 ORTHO05D004104 3.1e-169 599.4 397 81.9
FAN10G2437 Fragaria x ananassa HOM05D003568 ORTHO05D004104 7.5e-168 594.7 500 66.6
Sopen10g009060 Solanum pennellii HOM05D003568 ORTHO05D004104 2.0e-160 570.1 521 63.9
Sopen10g009080 Solanum pennellii HOM05D003568 ORTHO05D004104 5.6e-155 552.0 539 60.3
Sopen10g009040 Solanum pennellii HOM05D003568 ORTHO05D004104 6.0e-149 531.9 528 60.0
COL.COLO4_22311 Corchorus olitorius HOM05D003568 ORTHO05D004104 3.9e-148 529.3 376 75.5
CBR_g38471 Chara braunii HOM05D003568 ORTHO05D004104 4.0e-145 519.2 592 52.4
Solyc10g019110.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 3.1e-137 493.0 436 63.1
Pp3c17_2120 Physcomitrium patens HOM05D003568 ORTHO05D004104 8.4e-135 485.0 537 51.0
Dinv09575 Davidia involucrata HOM05D003568 ORTHO05D004104 3.0e-132 476.5 307 80.5
Pp3c7_5960 Physcomitrium patens HOM05D003568 ORTHO05D004104 4.3e-131 472.6 418 62.4
AagrBONN_evm.TU.Sc2ySwM_362.1439 Anthoceros agrestis HOM05D003568 ORTHO05D004104 8.2e-122 441.8 546 46.9
PSO478G4032 Papaver somniferum HOM05D003568 ORTHO05D004104 1.6e-117 427.6 415 60.0
Sopen00g003310 Solanum pennellii HOM05D003568 ORTHO05D004104 5.3e-105 386.0 488 50.8
Pp3c10_23750 Physcomitrium patens HOM05D003568 ORTHO05D004104 3.3e-99 366.7 554 39.7
Solyc10g019140.1 Solanum lycopersicum HOM05D003568 ORTHO05D004104 4.4e-99 366.3 276 71.0
Dinv09574 Davidia involucrata HOM05D003568 ORTHO05D004104 4.8e-98 362.8 233 80.3
Nitab4.5_0004323g0080 Nicotiana tabacum HOM05D003568 ORTHO05D004104 5.3e-97 359.4 261 73.6
Sopen00g004930 Solanum pennellii HOM05D003568 ORTHO05D004104 9.4e-94 348.6 365 57.3
CAN.G77.8 Capsicum annuum HOM05D003568 ORTHO05D004104 8.8e-84 315.5 291 66.0
Ah.12g059250 Amaranthus hybridus HOM05D003568 ORTHO05D004104 1.2e-77 295.0 279 59.5
Hma1.2p1_0335F.1_g128910 Hydrangea macrophylla HOM05D003568 ORTHO05D004104 6.0e-64 249.6 147 85.0
Psat3g201360 Pisum sativum HOM05D003568 ORTHO05D004104 5.4e-49 199.9 184 67.9
Solyc10g019130.3 Solanum lycopersicum HOM05D003568 ORTHO05D004104 1.4e-41 175.3 127 74.8
CDE06G2354 Ceratophyllum demersum HOM05D003568 ORTHO05D004104 2.2e-34 151.4 114 70.2
SEGI_22298 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 4.2e-33 147.1 86 82.6
Oeu015217.1 Olea europaea HOM05D003568 ORTHO05D004104 1.2e-32 145.6 86 84.9
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 6.6e-31 139.8 92 75.0
Ah.12g059260 Amaranthus hybridus HOM05D003568 ORTHO05D004104 1.5e-30 138.7 81 82.7
PRCOL_00002354 Prasinoderma coloniale HOM05D003568 ORTHO05D004104 1.4e-28 132.1 600 26.7
RcHm_v2.0_Chr1g0375581 Rosa chinensis HOM05D003568 ORTHO05D004104 2.1e-21 108.2 91 64.8
VMungo1383G1077 Vigna mungo HOM05D003568 ORTHO05D004104 1.1e-20 105.9 82 65.9
Solyc10g019100.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 5.3e-20 103.6 62 83.9
Cre12.g551801 Chlamydomonas reinhardtii HOM05D003568 ORTHO05D004104 2.0e-19 101.7 209 29.2
RcHm_v2.0_Chr1g0375651 Rosa chinensis HOM05D003568 ORTHO05D004104 5.9e-11 73.6 108 44.4
RcHm_v2.0_Chr1g0375601 Rosa chinensis HOM05D003568 ORTHO05D004104 1.3e-07 62.4 56 60.7
MCO10G270 Micromonas commoda HOM05D003568 ORTHO05D004104 5.7e-06 57.0 201 25.9


User provided reference genes

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