Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 1.0e-185 653.3 340 100.0
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 6.9e-97 358.2 273 68.5
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 7.4e-91 338.2 289 63.0
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 1.9e-86 323.6 263 65.0
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 4.6e-85 318.9 276 63.8
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.8e-84 317.0 264 63.3
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 3.0e-84 316.2 267 63.3
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.5e-83 313.9 266 62.0
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.9e-83 313.5 266 61.7
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 3.3e-83 312.8 276 60.1
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 4.3e-83 312.4 266 61.7
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 7.4e-83 311.6 266 60.5
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 9.6e-83 311.2 268 61.2
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.3e-82 310.8 264 62.9
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 1.3e-82 310.8 271 59.8
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 3.7e-82 309.3 281 60.9
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 4.8e-82 308.9 291 58.4
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 8.2e-82 308.1 267 63.7
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.4e-81 307.4 266 61.7
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 1.4e-81 307.4 273 61.5
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 5.3e-81 305.4 265 60.8
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 6.9e-81 305.1 264 61.4
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 9.0e-81 304.7 269 59.5
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 9.0e-81 304.7 265 60.0
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 1.2e-80 304.3 265 61.1
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 1.5e-80 303.9 268 63.4
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 1.5e-80 303.9 268 63.1
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 2.0e-80 303.5 265 62.6
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 5.8e-80 302.0 264 61.4
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 7.6e-80 301.6 265 61.1
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.7e-79 300.4 261 61.7
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 1.7e-79 300.4 273 60.4
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 2.2e-79 300.1 271 58.3
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 6.5e-79 298.5 264 60.2
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 1.1e-78 297.7 264 60.6
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 1.1e-78 297.7 269 60.2
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 1.4e-78 297.4 264 60.2
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 1.4e-78 297.4 261 60.5
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 1.9e-78 297.0 264 59.5
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 1.9e-78 297.0 267 62.5
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 4.2e-78 295.8 264 59.5
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 7.1e-78 295.0 266 61.7
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 7.1e-78 295.0 269 62.1
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 1.2e-77 294.3 290 54.5
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 1.6e-77 293.9 271 57.9
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.6e-77 293.9 291 55.3
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 7.9e-77 291.6 265 60.4
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 1.0e-76 291.2 278 57.6
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 2.3e-76 290.0 265 58.9
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 2.3e-76 290.0 266 60.5
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 5.1e-76 288.9 273 56.4
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 6.7e-76 288.5 264 59.8
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 8.7e-76 288.1 261 61.3
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 8.7e-76 288.1 305 53.1
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 8.7e-76 288.1 266 57.5
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 1.1e-75 287.7 297 53.9
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 3.3e-75 286.2 265 57.4
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.3e-75 286.2 265 57.4
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 7.4e-75 285.0 289 55.0
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 9.7e-75 284.6 266 59.8
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 1.6e-74 283.9 265 58.5
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 2.8e-74 283.1 264 58.7
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 1.1e-73 281.2 290 54.5
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 1.4e-73 280.8 298 53.0
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 1.8e-73 280.4 270 57.4
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 5.3e-73 278.9 267 56.9
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 9.0e-73 278.1 301 56.1
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 1.5e-72 277.3 218 67.4
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 1.5e-72 277.3 266 58.3
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 2.0e-72 276.9 319 51.7
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 1.7e-71 273.9 250 59.2
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 3.8e-71 272.7 264 58.3
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 8.5e-71 271.6 270 53.0
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 9.4e-70 268.1 264 56.8
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 9.4e-70 268.1 278 53.6
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 1.6e-69 267.3 326 47.5
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.6e-69 265.8 265 54.7
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 7.9e-69 265.0 264 56.1
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 3.0e-68 263.1 318 48.4
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 3.0e-68 263.1 254 59.1
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 6.7e-68 261.9 289 53.3
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 6.7e-68 261.9 266 54.5
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 1.1e-67 261.2 271 53.5
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 1.1e-67 261.2 275 52.4
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.5e-67 260.8 266 53.8
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 2.4e-65 253.4 287 50.5
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 4.1e-65 252.7 288 50.3
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 9.1e-65 251.5 273 52.0
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 3.4e-64 249.6 289 51.6
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 2.2e-63 246.9 288 49.3
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 1.9e-62 243.8 268 53.0
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 1.9e-62 243.8 269 52.8
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 7.2e-62 241.9 265 53.2
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 9.4e-62 241.5 215 60.0
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 1.2e-61 241.1 286 47.9
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 2.7e-61 240.0 290 47.6
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 3.6e-61 239.6 265 52.5
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 4.7e-61 239.2 287 48.8
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 7.9e-61 238.4 286 48.6
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 7.9e-61 238.4 286 48.6
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 7.9e-61 238.4 286 48.6
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 1.0e-60 238.0 287 48.4
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 1.4e-60 237.7 288 47.9
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 3.0e-60 236.5 264 50.8
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 3.9e-60 236.1 261 52.9
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 1.5e-59 234.2 295 47.8
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 1.5e-59 234.2 295 47.8
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 2.0e-59 233.8 289 47.8
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 5.9e-56 222.2 230 56.1
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 1.3e-55 221.1 218 57.8
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 1.1e-51 208.0 281 44.5
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.5e-51 207.6 266 48.1
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 5.7e-51 205.7 270 44.8
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 9.7e-51 204.9 271 48.0
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 7.7e-48 195.3 299 45.5
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 6.5e-47 192.2 291 43.0
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 2.2e-39 167.2 172 54.7
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.8e-39 166.4 264 41.3
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.6e-37 159.8 262 40.8
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 3.0e-36 156.8 93 90.3
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 4.1e-33 146.4 151 51.0
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 2.8e-29 133.7 91 74.7
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 1.0e-28 131.7 191 43.5
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 1.5e-27 127.9 138 47.8
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 1.8e-25 120.9 71 88.7
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 3.2e-25 120.2 101 61.4
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 1.6e-24 117.9 303 32.3
MBI19_g09322_MAGBIO Magnolia biondii HOM05D017522 ORTHO05D006784 1.9e-22 110.9 68 85.3
MBI17_g28780_MAGBIO Magnolia biondii HOM05D017522 ORTHO05D006784 3.6e-21 106.7 72 79.2
MBI10_g41090_MAGBIO Magnolia biondii HOM05D017522 ORTHO05D006784 8.0e-21 105.5 72 79.2
MBI16_g18327_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D001279 1.9e-17 94.4 55 87.3
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 1.0e-15 88.6 115 48.7
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 5.6e-14 82.8 55 74.5
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 1.6e-13 81.3 46 87.0
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 1.6e-13 81.3 46 87.0
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 1.6e-13 81.3 46 87.0
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.6e-13 81.3 83 55.4
MBI14_g24031_MAGBIO Magnolia biondii HOM05D000074 ORTHO05D001262 6.2e-13 79.3 58 72.4
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 1.8e-12 77.8 67 59.7
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 3.1e-12 77.0 45 84.4
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 5.2e-12 76.3 48 79.2
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 8.9e-12 75.5 368 26.9
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 8.3e-10 68.9 98 42.9
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 1.9e-09 67.8 104 37.5
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 7.1e-09 65.9 93 39.8
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 3.9e-07 60.1 51 64.7
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 5.6e-06 56.2 122 31.1


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