Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 5.1e-79 297.7 158 100.0
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 9.1e-68 260.4 158 89.2
MBI03_g33921_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 3.8e-50 201.8 159 69.2
MBI03_g33915_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.7e-32 141.7 137 62.0
MBI18_g00962_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.9e-17 93.2 109 43.1
MBI06_g03980_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.8e-16 89.4 125 41.6
MBI18_g01155_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 5.2e-15 85.1 121 38.0
MBI18_g41917_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.0e-14 83.2 123 35.0
MBI05_g28284_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D010887 7.5e-14 81.3 106 42.5
MBI06_g46441_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 7.5e-14 81.3 127 37.8
MBI05_g05683_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.9e-13 78.6 101 42.6
MBI06_g04640_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 6.0e-11 71.6 127 35.4
Os06g0147100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 8.6e-10 67.8 101 38.6
Os06g0580100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.9e-09 66.6 123 30.1
Zm00001eb339450 Zea mays HOM05D009627 ORTHO05D010887 5.6e-09 65.1 100 38.0
Os02g0216300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.6e-08 63.5 102 30.4
Os01g0238200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.8e-08 62.8 102 32.4
Zm00001eb277260 Zea mays HOM05D009627 ORTHO05D010887 2.8e-08 62.8 137 29.9
Os06g0147250 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 4.7e-08 62.0 102 34.3
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.1e-07 60.8 115 40.9
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 1.4e-07 60.5 128 32.8
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.4e-07 60.5 115 40.9
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 3.1e-07 59.3 113 35.4
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 4.0e-07 58.9 129 34.1
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 4.0e-07 58.9 129 34.1
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 5.2e-07 58.5 131 34.4
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 5.2e-07 58.5 131 34.4
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 5.2e-07 58.5 131 34.4
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 6.8e-07 58.2 128 31.2
Os01g0714600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 8.9e-07 57.8 105 31.4
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 1.2e-06 57.4 125 31.2
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 1.5e-06 57.0 124 32.3
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.0e-06 56.6 138 35.5
Os05g0181700 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 7.6e-06 54.7 129 30.2
Os06g0147400 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 7.6e-06 54.7 101 28.7


User provided reference genes

Program Settings