Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 6.6e-221 770.4 387 100.0
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 6.1e-134 481.5 398 65.8
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 8.9e-133 477.6 404 63.6
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 3.4e-132 475.7 404 64.1
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 8.0e-126 454.5 324 71.6
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 8.0e-126 454.5 415 61.4
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 3.0e-125 452.6 365 65.2
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 6.8e-125 451.4 373 64.3
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 4.4e-124 448.7 295 75.3
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 4.4e-124 448.7 383 63.2
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 9.8e-124 447.6 373 63.5
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 3.7e-123 445.7 378 63.5
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 5.4e-122 441.8 368 64.9
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 7.0e-122 441.4 374 64.2
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 7.0e-122 441.4 361 64.8
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 1.6e-121 440.3 321 69.2
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 1.6e-121 440.3 338 66.3
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.7e-121 439.5 334 65.6
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.7e-121 439.5 412 60.4
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 4.6e-121 438.7 384 60.7
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.6e-121 438.7 334 65.6
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 6.0e-121 438.3 281 75.4
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 6.0e-121 438.3 281 75.4
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 6.0e-121 438.3 281 76.2
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 7.8e-121 438.0 334 65.3
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 7.8e-121 438.0 289 75.4
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.0e-120 437.6 333 67.6
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 1.3e-120 437.2 319 69.9
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 1.7e-120 436.8 318 68.9
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 2.3e-120 436.4 397 59.7
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-120 436.4 316 69.3
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 3.9e-120 435.6 319 69.6
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 3.9e-120 435.6 317 68.1
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 5.0e-120 435.3 286 75.2
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 6.6e-120 434.9 328 68.6
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 8.6e-120 434.5 353 65.2
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 8.6e-120 434.5 317 68.1
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 1.5e-119 433.7 379 60.9
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.9e-119 433.3 332 66.9
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 2.5e-119 433.0 338 66.3
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 3.3e-119 432.6 319 68.0
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 7.3e-119 431.4 384 60.9
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 7.3e-119 431.4 323 68.1
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 9.5e-119 431.0 381 63.5
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 1.2e-118 430.6 328 67.1
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 1.2e-118 430.6 278 76.3
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 3.6e-118 429.1 319 68.0
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 3.6e-118 429.1 317 68.8
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 6.2e-118 428.3 277 75.5
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 6.2e-118 428.3 336 65.8
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.2e-118 428.3 330 66.4
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 8.0e-118 427.9 272 75.7
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-117 427.6 330 66.4
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 1.4e-117 427.2 317 68.1
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.4e-117 427.2 376 59.8
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 1.8e-117 426.8 365 62.7
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 2.3e-117 426.4 317 67.8
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 3.1e-117 426.0 279 74.2
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.2e-116 424.1 314 66.6
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 2.0e-116 423.3 314 66.2
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 2.0e-116 423.3 320 66.2
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 2.6e-116 422.9 330 63.6
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.3e-115 420.6 338 63.0
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 1.7e-115 420.2 376 58.2
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 1.7e-115 420.2 376 58.2
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 2.2e-115 419.9 385 60.0
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 2.9e-115 419.5 268 75.7
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 3.7e-115 419.1 337 64.7
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 3.7e-115 419.1 273 74.7
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 4.9e-115 418.7 377 58.6
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 6.4e-115 418.3 371 59.3
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 3.2e-114 416.0 345 60.3
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 4.1e-114 415.6 354 59.6
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 6.0e-113 411.8 280 69.3
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 1.0e-112 411.0 271 72.7
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 3.9e-112 409.1 351 61.0
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 8.6e-112 407.9 389 58.4
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 3.3e-111 406.0 263 73.8
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 9.5e-111 404.4 329 62.6
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 1.2e-110 404.1 321 63.6
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 6.2e-110 401.7 400 55.2
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.4e-109 400.6 335 60.9
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 5.2e-109 398.7 344 59.9
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 5.2e-109 398.7 269 72.9
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 1.5e-108 397.1 281 68.7
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 1.5e-108 397.1 281 68.7
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 1.5e-108 397.1 286 67.8
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 2.0e-108 396.7 281 68.3
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 2.0e-108 396.7 281 68.3
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 4.4e-108 395.6 397 56.7
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 3.7e-107 392.5 281 66.9
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 1.4e-106 390.6 337 59.1
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.9e-106 390.2 520 46.9
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 8.6e-104 381.3 448 49.3
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 2.1e-102 376.7 320 62.2
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 2.8e-102 376.3 331 61.0
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 1.5e-100 370.5 394 52.8
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 5.8e-100 368.6 356 57.6
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 1.3e-99 367.5 328 60.1
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 5.4e-98 362.1 304 62.5
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 4.6e-97 359.0 269 65.4
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 1.0e-96 357.8 404 49.3
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 2.3e-96 356.7 450 50.7
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 5.1e-96 355.5 320 63.1
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 1.1e-95 354.4 215 79.1
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 1.9e-95 353.6 215 80.0
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 1.6e-94 350.5 269 63.9
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 6.2e-94 348.6 216 78.2
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.1e-93 346.3 242 70.2
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 8.4e-91 338.2 295 59.7
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 2.4e-90 336.7 261 62.1
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 1.1e-82 311.2 295 60.0
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 2.5e-79 300.1 200 71.0
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 3.1e-77 293.1 215 68.8
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.7e-75 287.3 215 65.1
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.9e-75 285.8 285 51.2
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 1.1e-71 274.6 174 78.2
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.6e-70 270.8 538 36.4
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 9.0e-69 265.0 239 56.5
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 9.0e-69 265.0 220 63.6
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 7.6e-68 261.9 285 54.0
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 4.2e-66 256.1 274 55.1
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 2.5e-55 220.3 232 56.9
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.1e-42 178.3 253 38.7
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.5e-39 167.9 247 36.8
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 2.2e-30 137.5 287 33.1
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 9.4e-26 122.1 247 34.4
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.7e-20 104.0 86 62.8
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 1.9e-18 97.8 66 72.7
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 4.2e-18 96.7 111 52.3
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-15 88.6 64 64.1
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 1.5e-15 88.2 64 64.1
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 5.7e-15 86.3 64 64.1
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.5e-15 85.9 64 64.1
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.5e-15 85.9 64 64.1
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-13 82.0 64 57.8
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-13 82.0 64 57.8
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-13 82.0 64 57.8
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.8e-13 81.3 169 32.5
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 3.2e-13 80.5 64 56.2
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.2e-13 80.5 64 56.2
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 7.0e-13 79.3 64 54.7
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 9.2e-13 79.0 169 31.4
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 5.9e-12 76.3 156 34.6
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 5.0e-11 73.2 171 28.7
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 5.0e-11 73.2 260 25.4
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 1.1e-10 72.0 165 30.9
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 1.9e-10 71.2 49 75.5
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 1.8e-08 64.7 193 30.1


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