Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 8.1e-132 475.3 715 100.0
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 2.5e-32 144.8 139 53.2
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.6e-31 142.1 149 49.7
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 7.6e-29 133.3 145 53.1
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 2.2e-28 131.7 172 41.9
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 2.9e-28 131.3 158 45.6
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 4.9e-28 130.6 170 44.7
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.1e-27 129.4 140 48.6
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 5.4e-27 127.1 164 41.5
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 7.1e-27 126.7 133 55.6
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 1.2e-26 125.9 173 45.1
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 2.7e-26 124.8 146 50.0
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 2.7e-26 124.8 116 53.4
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 3.5e-26 124.4 165 44.8
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.6e-26 124.0 114 54.4
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 6.0e-26 123.6 149 45.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.0e-25 122.9 105 56.2
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.3e-25 122.5 146 43.8
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.7e-25 122.1 113 55.8
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 1.7e-25 122.1 112 59.8
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.7e-25 122.1 125 52.8
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 2.3e-25 121.7 142 47.2
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 3.0e-25 121.3 113 54.9
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 3.9e-25 120.9 142 45.1
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 5.1e-25 120.6 113 53.1
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 5.1e-25 120.6 144 47.9
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 5.1e-25 120.6 133 51.9
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 5.1e-25 120.6 125 52.0
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 6.6e-25 120.2 112 54.5
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 6.6e-25 120.2 112 54.5
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 8.7e-25 119.8 183 42.1
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.5e-24 119.0 136 48.5
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.5e-24 119.0 144 46.5
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.9e-24 118.6 136 47.1
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.5e-24 118.2 105 55.2
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 3.3e-24 117.9 136 47.1
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 3.3e-24 117.9 113 54.0
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 4.3e-24 117.5 149 43.6
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 5.6e-24 117.1 107 57.0
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 5.6e-24 117.1 90 63.3
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 5.6e-24 117.1 145 43.4
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 5.6e-24 117.1 116 50.9
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 5.6e-24 117.1 142 47.9
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 7.3e-24 116.7 107 57.9
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 9.6e-24 116.3 105 58.1
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 9.6e-24 116.3 149 47.7
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 1.6e-23 115.5 188 39.9
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 2.8e-23 114.8 185 36.8
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 3.6e-23 114.4 158 44.3
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 3.6e-23 114.4 154 44.2
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 4.8e-23 114.0 186 37.6
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 4.8e-23 114.0 186 37.6
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 8.1e-23 113.2 112 53.6
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.1e-22 112.8 159 42.1
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.4e-22 112.5 186 37.1
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.4e-22 112.5 150 41.3
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.4e-22 112.5 150 41.3
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.4e-22 112.5 170 45.9
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.8e-22 112.1 146 45.9
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 3.1e-22 111.3 161 41.6
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 3.1e-22 111.3 104 54.8
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 5.3e-22 110.5 172 37.8
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 6.9e-22 110.2 178 38.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 6.9e-22 110.2 106 56.6
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 6.9e-22 110.2 106 53.8
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 9.0e-22 109.8 113 54.0
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.2e-21 109.4 187 38.5
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 1.2e-21 109.4 103 52.4
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.2e-21 109.4 112 51.8
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.5e-21 109.0 93 55.9
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.5e-21 109.0 105 54.3
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 2.0e-21 108.6 144 39.6
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 2.6e-21 108.2 186 39.8
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 2.6e-21 108.2 197 39.1
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.6e-21 108.2 197 39.1
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 3.4e-21 107.8 138 44.2
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 5.8e-21 107.1 146 42.5
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 7.6e-21 106.7 147 40.8
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 7.6e-21 106.7 102 55.9
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 7.6e-21 106.7 106 54.7
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 9.9e-21 106.3 98 56.1
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 9.9e-21 106.3 160 42.5
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.3e-20 105.9 123 45.5
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 1.7e-20 105.5 147 40.8
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 2.2e-20 105.1 90 56.7
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 2.9e-20 104.8 185 36.2
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 2.9e-20 104.8 94 57.4
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 2.9e-20 104.8 78 61.5
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.8e-20 104.4 147 40.1
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 6.4e-20 103.6 138 42.0
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 8.4e-20 103.2 78 60.3
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.1e-19 102.8 85 56.5
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 1.1e-19 102.8 144 39.6
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 1.1e-19 102.8 144 39.6
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 1.9e-19 102.1 110 47.3
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 1.9e-19 102.1 138 41.3
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 2.4e-19 101.7 148 39.9
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.1e-19 100.1 85 54.1
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.0e-17 96.3 79 54.4
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.7e-17 95.5 138 39.1
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.5e-16 92.4 73 56.2
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 3.3e-16 91.3 83 51.8
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 3.6e-15 87.8 105 42.9
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 8.1e-15 86.7 135 35.6
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 8.1e-15 86.7 135 35.6
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.8e-14 85.5 107 39.3
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 9.9e-13 79.7 65 60.0
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 9.3e-11 73.2 89 48.3
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.3e-09 69.3 54 57.4
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 6.7e-09 67.0 69 47.8
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 3.3e-08 64.7 76 44.7
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 3.3e-08 64.7 76 44.7
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 4.3e-08 64.3 51 58.8
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 6.2e-07 60.5 50 56.0


User provided reference genes

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