Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 1.1e-21 106.7 104 100.0
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 1.0e-14 83.6 43 88.4
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 3.8e-14 81.6 43 79.1
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 5.0e-14 81.3 43 86.0
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 6.5e-14 80.9 43 83.7
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 8.5e-14 80.5 43 79.1
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 1.4e-13 79.7 43 79.1
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 1.4e-13 79.7 43 81.4
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 1.9e-13 79.3 42 85.7
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 1.9e-13 79.3 43 76.7
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.9e-13 79.3 40 85.0
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 2.5e-13 79.0 42 83.3
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 2.5e-13 79.0 41 82.9
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 79.1
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 79.1
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 3.2e-13 78.6 43 76.7
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 3.2e-13 78.6 41 80.5
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 4.2e-13 78.2 43 79.1
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 4.2e-13 78.2 42 76.2
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 4.2e-13 78.2 43 74.4
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 5.5e-13 77.8 42 76.2
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 5.5e-13 77.8 42 76.2
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 5.5e-13 77.8 42 76.2
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 7.2e-13 77.4 72 81.9
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 7.2e-13 77.4 41 80.5
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.2e-13 77.4 41 80.5
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.2e-13 77.4 41 80.5
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.2e-13 77.4 41 80.5
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 9.4e-13 77.0 43 81.4
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 1.2e-12 76.6 40 82.5
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 1.6e-12 76.3 42 81.0
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.6e-12 76.3 43 74.4
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.1e-12 75.9 43 81.4
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 2.7e-12 75.5 46 78.3
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 3.6e-12 75.1 38 86.8
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 3.6e-12 75.1 43 74.4
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 4.6e-12 74.7 41 78.0
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 4.6e-12 74.7 41 78.0
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 4.6e-12 74.7 42 73.8
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 4.6e-12 74.7 43 69.8
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 6.1e-12 74.3 36 88.9
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 6.1e-12 74.3 46 73.9
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 6.1e-12 74.3 43 72.1
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 6.1e-12 74.3 43 72.1
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 6.1e-12 74.3 41 80.5
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 6.1e-12 74.3 41 80.5
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 6.1e-12 74.3 43 72.1
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.0e-11 73.6 42 71.4
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 1.0e-11 73.6 39 76.9
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 1.0e-11 73.6 39 84.6
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 1.4e-11 73.2 43 69.8
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 1.4e-11 73.2 43 69.8
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.4e-11 73.2 43 72.1
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 1.4e-11 73.2 43 69.8
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 3.0e-11 72.0 43 69.8
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 3.0e-11 72.0 42 81.0
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 3.0e-11 72.0 43 69.8
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 3.9e-11 71.6 44 77.3
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 5.1e-11 71.2 37 83.8
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 6.7e-11 70.9 43 69.8
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 8.8e-11 70.5 43 67.4
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 1.1e-10 70.1 44 70.5
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 1.1e-10 70.1 43 72.1
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 1.1e-10 70.1 33 90.9
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 1.5e-10 69.7 41 73.2
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.5e-10 69.7 43 67.4
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.5e-10 69.7 43 67.4
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.5e-10 69.7 43 67.4
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 2.5e-10 68.9 43 69.8
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 4.3e-10 68.2 44 68.2
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 4.3e-10 68.2 44 72.7
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.4e-10 67.4 41 73.2
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 7.4e-10 67.4 31 90.3
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 1.7e-09 66.2 32 87.5
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 1.7e-09 66.2 32 84.4
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.7e-09 66.2 35 85.7
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 1.7e-09 66.2 31 87.1
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.7e-09 66.2 31 87.1
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 2.8e-09 65.5 33 78.8
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 4.8e-09 64.7 33 81.8
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 8.2e-09 63.9 34 73.5
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 8.2e-09 63.9 48 60.4
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 3.1e-08 62.0 30 80.0
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 9.1e-08 60.5 32 78.1
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 9.1e-08 60.5 32 75.0
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 1.2e-07 60.1 31 74.2
Nn5g27268 Nelumbo nucifera HOM05D006246 ORTHO05D007932 1.2e-07 60.1 30 90.0
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 2.6e-07 58.9 44 59.1
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 4.5e-07 58.2 37 67.6
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 1.3e-06 56.6 41 53.7
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 2.9e-06 55.5 39 64.1
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 3.8e-06 55.1 35 68.6


User provided reference genes

Program Settings