Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g46598_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 8.2e-35 149.8 75 100.0
MBI02_g34309_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 1.0e-21 106.3 66 84.8
COL.COLO4_17945 Corchorus olitorius HOM05D003235 ORTHO05D003863 6.7e-21 103.6 66 81.8
COL.COLO4_24688 Corchorus olitorius HOM05D003235 ORTHO05D003863 6.7e-21 103.6 66 81.8
Gohir.A03G209200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 3.3e-20 101.3 66 80.3
Manes.11G106900 Manihot esculenta HOM05D003235 ORTHO05D003863 5.7e-20 100.5 66 78.8
THA.LOC104819684 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 5.7e-20 100.5 66 78.8
Thecc.02G046900 Theobroma cacao HOM05D003235 ORTHO05D003863 5.7e-20 100.5 66 78.8
CSS0024694 Camellia sinensis var. sinensis HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 77.3
CARHR274300 Cardamine hirsuta HOM05D003235 ORTHO05D003863 7.4e-20 100.1 67 76.1
Dinv14158 Davidia involucrata HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 78.8
Gohir.D02G230900 Gossypium hirsutum HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 78.8
Gorai.005G258500 Gossypium raimondii HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 78.8
Manes.04G065100 Manihot esculenta HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 78.8
QL11p054430 Quercus lobata HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 78.8
QL11p054583 Quercus lobata HOM05D003235 ORTHO05D003863 7.4e-20 100.1 66 78.8
Nn1g03654 Nelumbo nucifera HOM05D003235 ORTHO05D003863 9.7e-20 99.8 66 78.8
Prupe.8G176600 Prunus persica HOM05D003235 ORTHO05D003863 9.7e-20 99.8 66 78.8
vmacro09726 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 9.7e-20 99.8 66 77.3
ECA233G5747 Erigeron canadensis HOM05D003235 ORTHO05D003863 1.3e-19 99.4 66 75.8
Sc14g0002390 Simmondsia chinensis HOM05D003235 ORTHO05D003863 1.3e-19 99.4 66 77.3
vmacro17286 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 1.3e-19 99.4 66 77.3
Gohir.A04G125200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 1.7e-19 99.0 66 78.8
Gohir.D04G170000 Gossypium hirsutum HOM05D003235 ORTHO05D003863 1.7e-19 99.0 66 78.8
Gorai.012G158300 Gossypium raimondii HOM05D003235 ORTHO05D003863 1.7e-19 99.0 66 78.8
Hund17321 Selenicereus undatus HOM05D003235 ORTHO05D003863 1.7e-19 99.0 66 77.3
TWI31G0863 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 1.7e-19 99.0 66 77.3
AL8G37210 Arabidopsis lyrata HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
AT5G60620 Arabidopsis thaliana HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
Cpa.g.sc20.187 Carica papaya HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
CDE05G0254 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 77.3
Medtr2g438210 Medicago truncatula HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
Medtr4g127910 Medicago truncatula HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
Phvul.003G022900 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
VMungo1215G3112 Vigna mungo HOM05D003235 ORTHO05D003863 2.2e-19 98.6 66 75.8
Actinidia32018 Actinidia chinensis HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 75.8
MSTRG.27622 Avicennia marina HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 77.3
Duzib248G1500 Durio zibethinus HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 77.3
MD00G1083900 Malus domestica HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 77.3
QL10p000641 Quercus lobata HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 75.8
Rhsim05G0048800 Rhododendron simsii HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 77.3
TAR627G1023 Trochodendron aralioides HOM05D003235 ORTHO05D003863 2.8e-19 98.2 66 75.8
arahy.Tifrunner.gnm1.ann1.5A4VTA Arachis hypogaea HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
arahy.Tifrunner.gnm1.ann1.MB0JZI Arachis hypogaea HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
CiPaw.06G117700 Carya illinoinensis HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
Ca_02021_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
Ciclev10028672m.g Citrus clementina HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
Glyma.09G119200 Glycine max HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
Lsat_1_v5_gn_8_120260 Lactuca sativa HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
Lj9A405T66 Lonicera japonica HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
SGA_v2.0_scaffold80G25821 Striga asiatica HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
TPR.G31486 Trifolium pratense HOM05D003235 ORTHO05D003863 3.7e-19 97.8 66 75.8
BcaB08g36361 Brassica carinata HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
BcaC04g19724 Brassica carinata HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
A10p17830 Brassica napus HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
C09p53360 Brassica napus HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
BolC9t58209H Brassica oleracea HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
Carub.0008s2130 Capsella rubella HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
ECA236G3279 Erigeron canadensis HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
Thhalv10013846m.g Eutrema salsugineum HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
HanXRQChr11g0335221 Helianthus annuus HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
HanXRQChr14g0458991 Helianthus annuus HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
Lsat_1_v5_gn_7_116021 Lactuca sativa HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
Lalb_Chr15g0083901 Lupinus albus HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
Sp6g22200 Schrenkiella parvula HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 74.2
vmacro20801 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 4.8e-19 97.4 66 75.8
Aa31LG2G14790 Aethionema arabicum HOM05D003235 ORTHO05D003863 6.3e-19 97.1 66 75.8
CAN.G1804.1 Capsicum annuum HOM05D003235 ORTHO05D003863 6.3e-19 97.1 66 74.2
Cc09_g10610 Coffea canephora HOM05D003235 ORTHO05D003863 6.3e-19 97.1 64 78.1
MD10G1138100 Malus domestica HOM05D003235 ORTHO05D003863 6.3e-19 97.1 66 77.3
Phvul.002G191600 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 6.3e-19 97.1 64 78.1
Solyc08g082340.3 Solanum lycopersicum HOM05D003235 ORTHO05D003863 6.3e-19 97.1 66 74.2
Sopen08g030600 Solanum pennellii HOM05D003235 ORTHO05D003863 6.3e-19 97.1 66 74.2
PGSC0003DMG400012284 Solanum tuberosum HOM05D003235 ORTHO05D003863 6.3e-19 97.1 66 74.2
arahy.Tifrunner.gnm1.ann1.0G9KRE Arachis hypogaea HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
arahy.Tifrunner.gnm1.ann1.S5QGNM Arachis hypogaea HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
BcaNung00615 Brassica carinata HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
BcaNung00616 Brassica carinata HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
A01p03310 Brassica napus HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
C01p03650 Brassica napus HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
BolC1t00356H Brassica oleracea HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
BraA01t00316Z Brassica rapa HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
CDE11G0005 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 75.8
Ca_25919_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
DCAR_015672 Daucus carota HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
PGR142G4436 Punica granatum HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
SalBow5G2197 Salvia bowleyana HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
SalBow5G2974 Salvia bowleyana HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
Sp7g33030 Schrenkiella parvula HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
SGA_v2.0_scaffold98G29294 Striga asiatica HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
TWI79G1341 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 8.2e-19 96.7 66 74.2
Atru.chr5.3499 Acer truncatum HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 75.8
Aqoxy7G01395 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 72.7
CAN.G1235.15 Capsicum annuum HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 74.2
CiPaw.05G089800 Carya illinoinensis HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 74.2
Lj6g0023552 Lotus japonicus HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 72.7
Lalb_Chr20g0114201 Lupinus albus HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 72.7
Peaxi162Scf00362g00250 Petunia axillaris HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 74.2
Psat1g147840 Pisum sativum HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 75.8
Hund00347 Selenicereus undatus HOM05D003235 ORTHO05D003863 1.1e-18 96.3 64 78.1
GSVIVG01023935001 Vitis vinifera HOM05D003235 ORTHO05D003863 1.1e-18 96.3 66 72.7
Haze_02042 Corylus avellana HOM05D003235 ORTHO05D003863 1.4e-18 95.9 66 75.8
Migut.N01350 Erythranthe guttata HOM05D003235 ORTHO05D003863 1.4e-18 95.9 66 74.2
Nitab4.5_0006796g0050 Nicotiana tabacum HOM05D003235 ORTHO05D003863 1.4e-18 95.9 66 72.7
Sabra09G0111000 Salix brachista HOM05D003235 ORTHO05D003863 1.4e-18 95.9 66 74.2
THA.LOC104807394 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 1.4e-18 95.9 66 74.2
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 1.8e-18 95.5 66 74.2
ECA236G2309 Erigeron canadensis HOM05D003235 ORTHO05D000512 2.4e-18 95.1 64 75.0
Eucgr.I01507 Eucalyptus grandis HOM05D003235 ORTHO05D003863 2.4e-18 95.1 66 74.2
FvH4_2g16380 Fragaria vesca HOM05D003235 ORTHO05D003863 2.4e-18 95.1 64 78.1
FAN24G0538 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.4e-18 95.1 64 78.1
FAN24G1371 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.4e-18 95.1 64 78.1
Potri.009G143200 Populus trichocarpa HOM05D003235 ORTHO05D003863 2.4e-18 95.1 66 74.2
Oeu051847.1 Olea europaea HOM05D003235 ORTHO05D003863 3.1e-18 94.7 66 72.7
PSO541G0846 Papaver somniferum HOM05D003235 ORTHO05D003863 4.1e-18 94.4 63 77.8
PSO675G5274 Papaver somniferum HOM05D003235 ORTHO05D003863 4.1e-18 94.4 63 77.8
Potri.004G183300 Populus trichocarpa HOM05D003235 ORTHO05D003863 4.1e-18 94.4 63 77.8
SHI05839 Sapria himalayana HOM05D003235 ORTHO05D003863 4.1e-18 94.4 63 77.8
Sed0003744 Sechium edule HOM05D003235 ORTHO05D003863 4.1e-18 94.4 66 71.2
Sed0009233 Sechium edule HOM05D003235 ORTHO05D003863 4.1e-18 94.4 66 71.2
unitig_749.g13984 Utricularia gibba HOM05D003235 ORTHO05D003863 4.1e-18 94.4 66 72.7
ATR1159G019 Amborella trichopoda HOM05D003235 ORTHO05D003863 5.3e-18 94.0 66 72.7
ClCG02G003570 Citrullus lanatus HOM05D003235 ORTHO05D003863 5.3e-18 94.0 66 71.2
CsaV3_7G001740 Cucumis sativus L. HOM05D003235 ORTHO05D003863 5.3e-18 94.0 66 71.2
FAN15G0986 Fragaria x ananassa HOM05D003235 ORTHO05D003863 5.3e-18 94.0 64 76.6
Glyma.05G131100 Glycine max HOM05D003235 ORTHO05D003863 7.0e-18 93.6 64 75.0
Cc08_g00700 Coffea canephora HOM05D003235 ORTHO05D003863 9.1e-18 93.2 66 74.2
Glyma.08G085800 Glycine max HOM05D003235 ORTHO05D003863 9.1e-18 93.2 64 75.0
MELO3C013265.2 Cucumis melo HOM05D003235 ORTHO05D003863 1.2e-17 92.8 66 69.7
FAN08G2058 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.2e-17 92.8 64 75.0
RcHm_v2.0_Chr6g0280151 Rosa chinensis HOM05D003235 ORTHO05D003863 1.2e-17 92.8 64 75.0
Ah.01g007750 Amaranthus hybridus HOM05D003235 ORTHO05D003863 2.0e-17 92.0 64 75.0
Ah.01g023630 Amaranthus hybridus HOM05D003235 ORTHO05D003863 2.6e-17 91.7 64 73.4
EL10Ac9g21270 Beta vulgaris HOM05D003235 ORTHO05D003863 2.6e-17 91.7 66 72.7
Actinidia20561 Actinidia chinensis HOM05D003235 ORTHO05D003863 3.5e-17 91.3 64 75.0
CANSAT11G0145 Cannabis sativa HOM05D003235 ORTHO05D003863 3.5e-17 91.3 66 71.2
Aqoxy4G02019 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 5.9e-17 90.5 64 71.9
FvH4_5g27680 Fragaria vesca HOM05D003235 ORTHO05D003863 5.9e-17 90.5 64 73.4
FAN04G0585 Fragaria x ananassa HOM05D003235 ORTHO05D003863 5.9e-17 90.5 64 73.4
HPP92_017619 Vanilla planifolia HOM05D003235 ORTHO05D003863 5.9e-17 90.5 66 68.2
AUR62012940 Chenopodium quinoa HOM05D003235 ORTHO05D003863 1.0e-16 89.7 66 68.2
AUR62027140 Chenopodium quinoa HOM05D003235 ORTHO05D003863 1.0e-16 89.7 66 68.2
SEGI_35719 Sequoiadendron giganteum HOM05D003235 ORTHO05D003863 1.0e-16 89.7 64 71.9
HanXRQChr08g0236381 Helianthus annuus HOM05D003235 ORTHO05D003863 1.3e-16 89.4 66 71.2
Os07g0531600 Oryza sativa ssp. japonica HOM05D003235 ORTHO05D003863 3.8e-16 87.8 63 69.8
SMO164G0177 Selaginella moellendorffii HOM05D003235 ORTHO05D003863 6.5e-16 87.0 62 71.0
Mapoly0005s0123 Marchantia polymorpha HOM05D003235 ORTHO05D003863 8.5e-16 86.7 63 68.3
Mapoly0113s0056 Marchantia polymorpha HOM05D003235 ORTHO05D003863 1.5e-15 85.9 63 68.3
PGR042G2488 Punica granatum HOM05D003235 ORTHO05D003863 1.9e-15 85.5 69 63.8
AagrBONN_evm.TU.Sc2ySwM_344.5027 Anthoceros agrestis HOM05D003235 ORTHO05D003863 2.5e-15 85.1 66 65.2
Zm00001eb396350 Zea mays HOM05D003235 ORTHO05D003863 5.5e-15 84.0 63 65.1
Rhsim11G0196500 Rhododendron simsii HOM05D003235 ORTHO05D003863 7.2e-15 83.6 110 45.5
vmacro20582 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 7.2e-15 83.6 80 60.0
EL10Ac3g05834 Beta vulgaris HOM05D003235 ORTHO05D003863 1.6e-14 82.4 64 65.6
vmacro02323 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.1e-14 82.0 62 71.0
Nitab4.5_0000783g0290 Nicotiana tabacum HOM05D003235 ORTHO05D003863 6.1e-14 80.5 66 63.6
FAN27G1339 Fragaria x ananassa HOM05D003235 ORTHO05D003863 8.0e-14 80.1 64 65.6
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.0e-13 79.7 58 74.1
Pp3c11_26030 Physcomitrium patens HOM05D003235 ORTHO05D003863 1.4e-13 79.3 62 61.3
HPP92_011715 Vanilla planifolia HOM05D003235 ORTHO05D003863 1.4e-13 79.3 57 71.9
CBR_g18671 Chara braunii HOM05D003235 ORTHO05D003863 6.8e-13 77.0 57 71.9
Eucgr.G01837 Eucalyptus grandis HOM05D003235 ORTHO05D003863 4.4e-12 74.3 64 60.9
Zm00001eb323170 Zea mays HOM05D003235 ORTHO05D003863 7.5e-12 73.6 57 64.9
Eucgr.G01836 Eucalyptus grandis HOM05D003235 ORTHO05D003863 6.3e-11 70.5 64 60.9
SEGI_03808 Sequoiadendron giganteum HOM05D003235 ORTHO05D003863 5.3e-10 67.4 64 56.2
PRCOL_00006733 Prasinoderma coloniale HOM05D003235 ORTHO05D003863 1.6e-09 65.9 62 53.2
Actinidia26336 Actinidia chinensis HOM05D003235 ORTHO05D003863 2.2e-08 62.0 57 61.4
Aqoxy2G01314 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 2.2e-08 62.0 48 66.7
MCO05G004 Micromonas commoda HOM05D003235 ORTHO05D003863 8.5e-08 60.1 62 46.8
AagrBONN_evm.TU.Sc2ySwM_344.1475 Anthoceros agrestis HOM05D003235 ORTHO05D003863 3.2e-07 58.2 43 67.4
Dinv41888 Davidia involucrata HOM05D003235 ORTHO05D003863 9.4e-07 56.6 28 92.9
Actinidia18009 Actinidia chinensis HOM05D003235 ORTHO05D003863 1.2e-06 56.2 28 92.9
FAN13G0036 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.6e-06 55.8 26 96.2
Cre06.g273250 Chlamydomonas reinhardtii HOM05D003235 ORTHO05D003863 2.1e-06 55.5 62 43.5


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