Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.4e-127 458.4 235 100.0
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.8e-62 242.3 130 93.1
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.2e-49 199.9 195 61.5
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.7e-36 155.6 135 65.9
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 2.9e-30 136.3 130 60.8
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 8.5e-30 134.8 135 57.8
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 8.5e-30 134.8 135 57.8
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 1.9e-29 133.7 133 57.1
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 2.5e-29 133.3 133 56.4
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 5.5e-29 132.1 132 58.3
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 7.2e-29 131.7 130 60.0
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.2e-28 131.0 130 58.5
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.6e-28 130.6 135 57.0
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 2.1e-28 130.2 141 56.0
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 2.1e-28 130.2 130 60.0
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 2.1e-28 130.2 135 56.3
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 2.1e-28 130.2 135 54.8
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 2.7e-28 129.8 130 59.2
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.6e-28 129.4 130 57.7
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 3.6e-28 129.4 130 57.7
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 3.6e-28 129.4 130 57.7
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 4.7e-28 129.0 135 56.3
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 4.7e-28 129.0 135 56.3
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 4.7e-28 129.0 135 56.3
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 6.1e-28 128.6 135 55.6
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 8.0e-28 128.3 135 54.8
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.0e-27 127.9 136 56.6
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.4e-27 127.5 135 54.8
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.8e-27 127.1 151 51.7
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 1.8e-27 127.1 130 56.9
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.8e-27 127.1 135 55.6
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 1.8e-27 127.1 149 51.7
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 2.3e-27 126.7 130 57.7
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 2.3e-27 126.7 135 56.3
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.3e-27 126.7 135 55.6
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 2.3e-27 126.7 130 56.9
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 2.3e-27 126.7 135 54.8
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 3.0e-27 126.3 135 55.6
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 3.0e-27 126.3 130 56.9
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 4.0e-27 125.9 135 54.8
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 4.0e-27 125.9 135 56.3
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 4.0e-27 125.9 130 57.7
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 5.2e-27 125.6 133 54.9
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 5.2e-27 125.6 130 58.5
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.2e-27 125.6 130 58.5
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 6.8e-27 125.2 135 54.1
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 6.8e-27 125.2 135 54.8
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 6.8e-27 125.2 135 56.3
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 6.8e-27 125.2 135 53.3
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 1.5e-26 124.0 136 52.9
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.5e-26 124.0 130 56.2
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.5e-26 124.0 130 56.2
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 1.5e-26 124.0 135 54.8
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 2.0e-26 123.6 135 54.1
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 2.0e-26 123.6 135 55.6
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 2.0e-26 123.6 135 55.6
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 2.6e-26 123.2 130 55.4
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 2.6e-26 123.2 134 56.0
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 2.6e-26 123.2 151 53.0
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 3.4e-26 122.9 135 54.8
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 3.4e-26 122.9 135 55.6
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 4.4e-26 122.5 130 54.6
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 4.4e-26 122.5 135 54.1
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 5.7e-26 122.1 135 54.1
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 5.7e-26 122.1 135 53.3
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 7.5e-26 121.7 135 53.3
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 7.5e-26 121.7 130 55.4
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 9.8e-26 121.3 130 56.9
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 9.8e-26 121.3 161 50.3
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 9.8e-26 121.3 135 54.1
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 1.3e-25 120.9 135 53.3
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 1.7e-25 120.6 135 53.3
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 1.7e-25 120.6 135 53.3
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.7e-25 120.6 132 57.6
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 1.7e-25 120.6 135 53.3
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.7e-25 120.6 138 52.2
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 2.8e-25 119.8 135 53.3
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.8e-25 119.8 135 54.1
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 3.7e-25 119.4 135 51.9
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 3.7e-25 119.4 135 51.9
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 3.7e-25 119.4 135 51.9
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 3.7e-25 119.4 135 51.9
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.7e-25 119.4 135 51.9
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 6.3e-25 118.6 136 54.4
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 6.3e-25 118.6 135 51.1
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 8.3e-25 118.2 135 52.6
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 8.3e-25 118.2 135 51.9
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 1.1e-24 117.9 130 53.8
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 2.4e-24 116.7 135 51.1
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.4e-24 116.7 130 55.4
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 3.1e-24 116.3 135 52.6
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 5.4e-24 115.5 143 49.7
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 9.2e-24 114.8 136 52.2
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 1.2e-23 114.4 135 50.4
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 2.0e-23 113.6 130 53.1
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 2.0e-23 113.6 123 56.9
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 2.7e-23 113.2 135 50.4
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 7.7e-23 111.7 135 50.4
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 7.7e-23 111.7 135 50.4
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 1.0e-22 111.3 135 48.9
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 2.9e-22 109.8 143 49.0
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 3.3e-21 106.3 123 49.6
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 4.7e-20 102.4 127 49.6
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 4.7e-20 102.4 130 49.2
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 2.3e-19 100.1 106 55.7
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.5e-18 97.4 131 45.8
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 4.4e-18 95.9 129 47.3
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 1.7e-17 94.0 106 51.9
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.4e-16 90.9 112 47.3
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 3.2e-16 89.7 106 50.0
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.4e-16 89.0 136 45.6
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 1.6e-15 87.4 112 46.4
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 2.0e-15 87.0 112 46.4
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 1.7e-14 84.0 112 43.8
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.0e-14 82.4 136 41.9
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 6.6e-14 82.0 139 38.8
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.5e-13 80.9 66 66.7
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.9e-13 80.5 60 68.3
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 2.5e-13 80.1 110 40.9
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.5e-13 80.1 108 44.4
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 9.5e-13 78.2 108 48.1
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 9.5e-13 78.2 81 53.1
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.2e-12 77.8 76 60.5
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 2.1e-12 77.0 62 62.9
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 5.2e-11 72.4 134 35.1
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 1.9e-08 63.9 50 66.0
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 3.2e-08 63.2 42 71.4
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.0e-08 62.0 42 73.8
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 2.0e-07 60.5 135 32.6
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.6e-07 59.3 136 36.0


User provided reference genes

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