Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 0.0e+00 1203.7 611 100.0
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.0e-212 743.8 647 63.7
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 5.2e-212 741.5 654 63.0
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 4.4e-203 711.8 603 64.5
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 1.3e-202 710.3 503 72.0
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 4.9e-202 708.4 559 66.5
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 4.6e-200 701.8 628 61.8
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 6.0e-200 701.4 625 61.9
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.7e-199 699.9 529 69.9
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 2.3e-199 699.5 672 58.2
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 1.1e-198 697.2 573 64.9
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 1.9e-198 696.4 534 67.6
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 2.5e-198 696.0 646 60.4
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 4.3e-198 695.3 525 69.7
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 1.2e-197 693.7 586 64.2
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 8.9e-196 687.6 525 69.1
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 8.9e-196 687.6 496 71.2
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 1.2e-195 687.2 605 61.7
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 7.5e-195 684.5 565 65.3
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 9.8e-195 684.1 473 74.2
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 1.3e-194 683.7 539 68.1
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 1.7e-194 683.3 599 62.1
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 6.4e-194 681.4 608 61.5
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 1.1e-193 680.6 483 70.2
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 1.4e-193 680.2 503 70.0
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 2.4e-193 679.5 476 72.3
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 3.5e-192 675.6 601 59.9
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.0e-191 674.1 489 70.1
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 5.0e-191 671.8 617 59.0
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 6.6e-191 671.4 643 58.0
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 1.5e-190 670.2 621 59.6
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 8.1e-189 664.5 589 60.8
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 1.1e-188 664.1 572 63.1
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.4e-188 663.7 491 71.3
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.4e-188 663.7 481 70.5
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.8e-188 663.3 589 60.8
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 1.8e-188 663.3 544 65.1
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 6.8e-188 661.4 484 68.8
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 2.0e-187 659.8 487 69.6
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 2.0e-187 659.8 514 68.5
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 3.4e-187 659.1 638 57.2
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 8.3e-186 654.4 542 63.1
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 2.4e-185 652.9 493 69.8
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 4.1e-185 652.1 483 68.1
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 5.4e-185 651.7 492 67.1
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 9.2e-185 651.0 566 62.0
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 2.1e-184 649.8 566 61.7
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 2.1e-184 649.8 483 70.2
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 7.8e-184 647.9 491 66.0
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 1.3e-183 647.1 544 61.8
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 2.3e-183 646.4 496 65.7
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 2.3e-183 646.4 502 64.9
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 3.0e-183 646.0 502 64.9
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 3.0e-183 646.0 488 68.2
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 3.9e-183 645.6 482 68.9
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 8.6e-183 644.4 583 58.8
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.9e-182 643.3 518 67.0
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 4.3e-182 642.1 505 64.2
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 4.3e-182 642.1 487 65.7
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 5.6e-182 641.7 487 65.3
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 7.3e-182 641.3 488 65.6
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 1.2e-181 640.6 472 69.7
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.6e-181 640.2 601 57.7
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 3.6e-181 639.0 615 58.7
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 6.2e-181 638.3 585 60.3
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.1e-180 636.0 546 62.5
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 3.1e-180 636.0 575 60.0
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 1.7e-178 630.2 618 58.4
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 2.2e-178 629.8 643 55.1
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 3.8e-178 629.0 643 56.1
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 8.4e-178 627.9 519 63.6
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 8.4e-178 627.9 607 60.1
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 2.4e-177 626.3 512 63.5
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 5.4e-177 625.2 547 62.9
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 2.5e-174 616.3 549 60.5
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 2.5e-174 616.3 544 60.7
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 4.3e-174 615.5 644 54.8
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 1.2e-173 614.0 594 56.9
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 3.1e-172 609.4 508 61.8
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 6.9e-172 608.2 584 56.0
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 1.2e-171 607.4 578 60.4
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 4.4e-171 605.5 482 64.1
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 5.8e-171 605.1 572 57.5
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 2.2e-170 603.2 590 56.8
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.2e-169 599.4 544 61.6
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.2e-168 597.4 484 63.0
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 7.8e-168 594.7 506 60.5
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 9.0e-164 581.3 634 55.0
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 9.0e-164 581.3 638 53.4
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 9.3e-161 571.2 392 75.5
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.6e-160 570.5 618 54.7
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 3.7e-157 559.3 519 59.0
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 1.1e-156 557.8 623 53.0
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 4.2e-153 545.8 575 53.9
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 4.6e-152 542.3 606 52.1
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 7.9e-152 541.6 392 71.9
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 6.2e-149 531.9 507 55.4
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 3.3e-142 509.6 417 67.9
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 3.3e-142 509.6 383 67.9
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 1.8e-140 503.8 501 53.1
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 4.5e-139 499.2 596 48.7
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 3.3e-134 483.0 498 56.8
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 2.2e-133 480.3 536 52.2
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 1.5e-131 474.2 440 56.8
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 3.2e-129 466.5 293 81.9
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 2.2e-125 453.8 308 75.6
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.0e-124 448.7 485 49.7
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 1.1e-121 441.4 471 53.5
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 2.1e-112 410.6 542 45.0
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 9.1e-108 395.2 520 48.7
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 1.7e-101 374.4 351 56.7
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 1.1e-100 371.7 476 47.1
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 3.1e-100 370.2 384 56.0
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 8.6e-98 362.1 475 44.6
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 5.2e-95 352.8 284 68.0
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 2.8e-93 347.1 267 67.4
CSS0007570 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 8.6e-90 335.5 376 52.4
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 3.6e-88 330.1 327 57.2
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 1.8e-87 327.8 518 39.4
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 9.8e-86 322.0 258 64.7
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 1.1e-79 302.0 195 79.0
CSS0047870 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 1.2e-78 298.5 353 51.3
Haze_15870 Corylus avellana HOM05D001329 ORTHO05D004946 2.4e-76 290.8 327 51.4
Haze_15874 Corylus avellana HOM05D001329 ORTHO05D004946 3.2e-76 290.4 327 51.4
CARHR258160 Cardamine hirsuta HOM05D001329 ORTHO05D004946 2.1e-75 287.7 238 60.1
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 4.4e-70 270.0 192 75.0
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 6.4e-69 266.2 192 68.8
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 7.8e-67 259.2 178 75.3
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 8.6e-66 255.8 295 48.8
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 2.4e-63 247.7 502 34.3
Actinidia21724 Actinidia chinensis HOM05D001329 ORTHO05D004946 4.9e-61 240.0 250 55.2
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 1.9e-57 228.0 155 78.1
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.5e-54 218.4 266 44.7
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 2.9e-53 214.2 249 52.2
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.2e-51 208.8 271 43.5
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.5e-51 207.2 247 46.6
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 1.2e-46 192.2 147 69.4
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 2.2e-45 188.0 157 68.2
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 4.2e-44 183.7 125 75.2
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 1.5e-41 175.3 117 74.4
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.1e-36 159.1 239 39.7
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.2e-36 157.5 246 39.8
SEGI_08653 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 1.8e-34 151.8 168 48.8
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 3.1e-31 141.0 150 56.0
Psat5g295400 Pisum sativum HOM05D001329 ORTHO05D004946 6.5e-29 133.3 128 52.3
PSO675G5297 Papaver somniferum HOM05D001329 ORTHO05D004946 4.6e-27 127.1 253 37.2
Glyma.13G353300 Glycine max HOM05D001329 ORTHO05D004946 1.0e-26 125.9 93 68.8
Hma1.2p1_0430F.1_g151230 Hydrangea macrophylla HOM05D001329 ORTHO05D004946 2.9e-21 107.8 191 34.6
Cpa.g.sc25.35 Carica papaya HOM05D001329 ORTHO05D004946 2.7e-19 101.3 88 47.7
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 9.7e-17 92.8 51 88.2
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 9.7e-17 92.8 152 36.8
Gohir.A05G129875 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.3e-16 92.4 69 66.7
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 1.4e-15 89.0 141 41.1
arahy.Tifrunner.gnm1.ann1.3W2ZUL Arachis hypogaea HOM05D001329 ORTHO05D010271 3.4e-14 84.3 74 58.1
Eucgr.G00548 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.3e-13 82.4 59 74.6
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.7e-13 82.0 120 45.0
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 5.0e-13 80.5 68 55.9
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 8.5e-13 79.7 54 68.5
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.5e-12 77.0 70 45.7
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 2.7e-11 74.7 59 71.2
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 6.1e-11 73.6 74 48.6
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 7.9e-11 73.2 81 49.4
arahy.Tifrunner.gnm1.ann1.R9IHKK Arachis hypogaea HOM05D001329 ORTHO05D010271 2.0e-09 68.6 52 65.4
arahy.Tifrunner.gnm1.ann1.H8VH8W Arachis hypogaea HOM05D008137 ORTHO05D010271 5.7e-09 67.0 51 60.8
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 9.7e-09 66.2 55 58.2
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 1.7e-08 65.5 54 53.7
BcaB01g06145 Brassica carinata HOM05D001329 ORTHO05D004946 8.2e-08 63.2 48 50.0
BcaC02g08434 Brassica carinata HOM05D001329 ORTHO05D004946 1.4e-07 62.4 48 50.0
C04p54240 Brassica napus HOM05D001329 ORTHO05D004946 1.4e-07 62.4 48 50.0
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 5.9e-06 57.0 40 70.0


User provided reference genes

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