Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.6e-98 362.8 190 100.0
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 9.6e-64 247.3 162 83.3
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 7.6e-53 211.1 154 73.4
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 2.4e-51 206.1 160 67.5
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 2.4e-51 206.1 156 69.2
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 3.2e-51 205.7 154 69.5
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 4.2e-51 205.3 154 70.8
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 7.1e-51 204.5 160 68.1
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 1.2e-50 203.8 156 70.5
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 2.1e-50 203.0 156 67.9
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 2.1e-50 203.0 162 67.9
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 2.7e-50 202.6 160 69.4
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 3.5e-50 202.2 154 70.1
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 7.9e-50 201.1 154 68.8
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 7.9e-50 201.1 156 67.3
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.0e-49 200.7 160 68.1
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.0e-49 200.7 154 69.5
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.3e-49 200.3 163 65.6
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 1.7e-49 199.9 154 68.2
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.7e-49 199.9 154 68.8
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.7e-49 199.9 154 68.2
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 3.0e-49 199.1 156 67.3
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 3.9e-49 198.7 156 67.9
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 3.9e-49 198.7 156 66.7
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 6.6e-49 198.0 160 66.2
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.1e-48 197.2 160 63.8
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 1.1e-48 197.2 153 67.3
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 1.5e-48 196.8 165 64.8
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.9e-48 196.4 160 63.8
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 3.3e-48 195.7 157 68.8
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 3.3e-48 195.7 156 64.7
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.3e-48 195.7 154 65.6
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 4.3e-48 195.3 157 68.8
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 7.3e-48 194.5 156 66.0
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 9.6e-48 194.1 160 63.1
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 1.6e-47 193.4 155 67.1
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 2.1e-47 193.0 159 63.5
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 2.1e-47 193.0 154 64.9
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 2.1e-47 193.0 159 64.8
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 2.8e-47 192.6 162 63.0
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 2.8e-47 192.6 162 63.0
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 8.1e-47 191.0 154 65.6
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 1.1e-46 190.7 156 64.1
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 1.1e-46 190.7 154 66.2
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.1e-46 190.7 156 64.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 1.4e-46 190.3 156 64.7
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.8e-46 189.9 162 62.3
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.8e-46 189.9 162 62.3
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.0e-45 186.4 162 61.1
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.4e-45 185.7 157 66.2
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.4e-45 185.7 157 66.2
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 9.9e-45 184.1 156 62.8
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 9.9e-45 184.1 157 65.6
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 9.9e-45 184.1 156 63.5
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.3e-44 183.7 147 63.9
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.7e-44 183.3 155 63.9
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.7e-44 183.3 154 63.6
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 1.7e-44 183.3 156 61.5
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 1.7e-44 183.3 156 59.6
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 8.4e-44 181.0 163 57.7
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 8.4e-44 181.0 162 58.6
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.4e-43 180.3 146 65.1
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.9e-43 179.9 156 62.8
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.9e-43 179.9 155 60.6
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 2.4e-43 179.5 159 62.3
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 7.1e-43 177.9 154 59.7
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 9.3e-43 177.6 160 58.1
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.6e-42 176.8 163 57.1
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 4.6e-42 175.3 156 59.0
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 4.6e-42 175.3 156 58.3
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.3e-41 173.7 160 56.9
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 1.8e-41 173.3 156 58.3
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 1.8e-41 173.3 156 58.3
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 3.0e-41 172.6 158 57.6
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 5.1e-41 171.8 154 57.8
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 6.7e-41 171.4 165 56.4
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 8.7e-41 171.0 156 56.4
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 1.1e-40 170.6 162 56.2
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.1e-40 170.6 156 57.1
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.9e-40 169.9 159 56.0
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 4.3e-40 168.7 155 56.8
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 5.6e-40 168.3 156 55.8
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 5.6e-40 168.3 156 55.8
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 2.1e-39 166.4 154 56.5
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.8e-39 165.2 154 59.1
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 6.2e-39 164.9 176 52.3
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.1e-35 154.1 156 54.5
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 5.5e-35 151.8 103 72.8
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 9.3e-35 151.0 140 65.7
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.2e-34 150.6 129 62.8
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 1.6e-34 150.2 174 51.1
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.0e-33 146.0 128 60.9
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 3.3e-32 142.5 172 45.3
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 3.3e-32 142.5 97 76.3
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 4.3e-32 142.1 99 76.8
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 5.7e-32 141.7 128 58.6
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 5.7e-32 141.7 128 60.2
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.4e-32 141.4 160 50.0
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 9.6e-32 141.0 159 51.6
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.6e-31 140.2 160 50.0
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 5.1e-25 118.6 156 44.9
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 7.4e-24 114.8 109 56.0
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 3.1e-22 109.4 156 43.6
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.2e-21 107.5 80 67.5
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 7.7e-21 104.8 163 46.0
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 1.0e-20 104.4 133 47.4
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.4e-19 100.5 155 43.9
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 7.9e-18 94.7 158 41.1
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 5.7e-16 88.6 65 73.8
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 1.7e-15 87.0 151 35.1
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 9.1e-14 81.3 112 41.1
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 1.1e-11 74.3 169 30.8
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 6.1e-10 68.6 107 38.3
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 3.9e-09 65.9 43 79.1
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 5.1e-09 65.5 54 57.4
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 8.8e-09 64.7 112 41.1


User provided reference genes

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