Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g32426_MAGBIO Magnolia biondii HOM05D009712 ORTHO05D011408 9.4e-184 646.7 329 100.0
MBI02_g37019_MAGBIO Magnolia biondii HOM05D009712 ORTHO05D011408 8.8e-182 640.2 329 98.8
CDE05G3527 Ceratophyllum demersum HOM05D009712 ORTHO05D011408 1.7e-60 237.3 347 40.9
CDE05G2875 Ceratophyllum demersum HOM05D009712 ORTHO05D011408 1.9e-59 233.8 311 44.4
Nn1g05247 Nelumbo nucifera HOM05D009712 ORTHO05D011408 2.7e-45 186.8 287 38.7
TAR628G0836 Trochodendron aralioides HOM05D009712 ORTHO05D011408 1.0e-44 184.9 291 37.8
TAR511G0002 Trochodendron aralioides HOM05D009712 ORTHO05D011408 5.0e-44 182.6 291 37.8
TAR628G1010 Trochodendron aralioides HOM05D009712 ORTHO05D011408 5.0e-44 182.6 291 37.1
TAR381G0100 Trochodendron aralioides HOM05D009712 ORTHO05D011408 1.6e-42 177.6 324 36.1
ATR0564G245 Amborella trichopoda HOM05D009712 ORTHO05D011408 7.5e-40 168.7 319 35.4
SEGI_00979 Sequoiadendron giganteum HOM05D009712 ORTHO05D011408 7.0e-38 162.2 387 31.0
Aqoxy6G00525 Aquilegia oxysepala HOM05D009712 ORTHO05D011408 5.5e-35 152.5 299 33.8
Aqoxy4G00865 Aquilegia oxysepala HOM05D009712 ORTHO05D011408 1.8e-33 147.5 285 33.3
AagrBONN_evm.TU.Sc2ySwM_228.211 Anthoceros agrestis HOM05D001259 ORTHO05D001103 2.0e-32 144.1 369 29.5
PSO541G4029 Papaver somniferum HOM05D009712 ORTHO05D011408 4.9e-31 139.4 327 31.2
QL06p050616 Quercus lobata HOM05D009712 ORTHO05D011408 4.9e-31 139.4 279 33.3
Pp3c6_8990 Physcomitrium patens HOM05D001259 ORTHO05D011408 3.1e-30 136.7 369 29.5
Pp3c5_15770 Physcomitrium patens HOM05D001259 ORTHO05D011408 5.9e-29 132.5 339 28.0
Mapoly0001s0550 Marchantia polymorpha HOM05D001259 ORTHO05D011408 1.3e-28 131.3 369 27.6
Atru.chr8.850 Acer truncatum HOM05D009712 ORTHO05D011408 3.6e-26 123.2 246 32.1
Pp3c16_9010 Physcomitrium patens HOM05D009712 ORTHO05D011408 4.4e-24 116.3 277 28.9
SMO270G0052 Selaginella moellendorffii HOM05D009712 ORTHO05D011408 7.5e-24 115.5 336 28.0
PGR004G0618 Punica granatum HOM05D009712 ORTHO05D011408 2.2e-23 114.0 289 28.0
Zm00001eb098660 Zea mays HOM05D032785 ORTHO05D011408 2.2e-23 114.0 284 29.6
Zm00001eb311190 Zea mays HOM05D032785 ORTHO05D011408 1.1e-22 111.7 291 31.6
PSO675G7929 Papaver somniferum HOM05D009712 ORTHO05D011408 4.1e-22 109.8 251 30.7
Os09g0369500 Oryza sativa ssp. japonica HOM05D032785 ORTHO05D011408 3.6e-18 96.7 291 28.2
Lj6g0017453 Lotus japonicus HOM05D009712 ORTHO05D011408 8.3e-15 85.5 235 28.5
Dinv21960 Davidia involucrata HOM05D009712 ORTHO05D011408 1.4e-14 84.7 117 33.3
Glyma.18G020250 Glycine max HOM05D009712 ORTHO05D011408 9.2e-14 82.0 257 25.7
VMungo1383G2626 Vigna mungo HOM05D009712 ORTHO05D011408 2.7e-13 80.5 261 26.4
Phvul.001G249800 Phaseolus vulgaris HOM05D009712 ORTHO05D011408 1.9e-11 74.3 263 25.9
CBR_g10814 Chara braunii HOM05D001259 ORTHO05D001103 7.3e-11 72.4 354 20.9
Zm00001eb228160 Zea mays HOM05D001259 ORTHO05D001103 8.9e-09 65.5 302 22.8
MSTRG.26384 Avicennia marina HOM05D001259 ORTHO05D001103 2.6e-08 63.9 167 28.1
MD02G1065400 Malus domestica HOM05D001259 ORTHO05D001103 3.4e-08 63.5 182 26.4
EL10Ac8g18382 Beta vulgaris HOM05D001259 ORTHO05D001103 5.8e-08 62.8 145 26.9
Cpa.g.sc40.98 Carica papaya HOM05D001259 ORTHO05D001103 9.9e-08 62.0 147 29.3
AUR62021411 Chenopodium quinoa HOM05D001259 ORTHO05D001103 1.3e-07 61.6 189 28.0
Ciclev10008680m.g Citrus clementina HOM05D001259 ORTHO05D001103 1.7e-07 61.2 196 30.1
Lj5A181T52 Lonicera japonica HOM05D001259 ORTHO05D001103 2.2e-07 60.8 296 23.3
CSS0008651 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 2.9e-07 60.5 170 27.1
AUR62010915 Chenopodium quinoa HOM05D001259 ORTHO05D001103 2.9e-07 60.5 258 24.4
DCAR_003162 Daucus carota HOM05D001259 ORTHO05D001103 2.9e-07 60.5 296 25.3
Gohir.D06G065700 Gossypium hirsutum HOM05D001259 ORTHO05D001103 4.9e-07 59.7 166 27.1
Gorai.010G077000 Gossypium raimondii HOM05D001259 ORTHO05D001103 4.9e-07 59.7 166 27.1
Glyma.01G008100 Glycine max HOM05D001259 ORTHO05D001103 6.4e-07 59.3 170 27.6
Cfa003183 Carpinus fangiana HOM05D001259 ORTHO05D001103 8.3e-07 58.9 193 30.6
Phvul.004G014300 Phaseolus vulgaris HOM05D001259 ORTHO05D001103 8.3e-07 58.9 246 24.8
Migut.K00537 Erythranthe guttata HOM05D001259 ORTHO05D001103 1.1e-06 58.5 177 27.1
TAR624G0650 Trochodendron aralioides HOM05D001259 ORTHO05D001103 1.1e-06 58.5 190 27.4
Duzib168G0295 Durio zibethinus HOM05D001259 ORTHO05D001103 1.4e-06 58.2 185 27.0
Lj5A181T53 Lonicera japonica HOM05D001259 ORTHO05D001103 1.4e-06 58.2 184 26.1
Manes.16G108400 Manihot esculenta HOM05D001259 ORTHO05D001103 1.4e-06 58.2 175 29.7
Prupe.7G220100 Prunus persica HOM05D001259 ORTHO05D001103 1.4e-06 58.2 185 27.6
Sed0008394 Sechium edule HOM05D001259 ORTHO05D001103 1.9e-06 57.8 213 22.5
Hund09111 Selenicereus undatus HOM05D001259 ORTHO05D001103 1.9e-06 57.8 234 24.4
Actinidia32653 Actinidia chinensis HOM05D001259 ORTHO05D001103 3.2e-06 57.0 172 26.2
CAN.G588.63 Capsicum annuum HOM05D001259 ORTHO05D001103 3.2e-06 57.0 189 24.9
CsaV3_1G039770 Cucumis sativus L. HOM05D001259 ORTHO05D001103 3.2e-06 57.0 175 29.1
Lj7C665T5 Lonicera japonica HOM05D001259 ORTHO05D001103 3.2e-06 57.0 145 24.8
Medtr8g102510 Medicago truncatula HOM05D001259 ORTHO05D001103 3.2e-06 57.0 173 28.3
Psat7g016960 Pisum sativum HOM05D001259 ORTHO05D001103 3.2e-06 57.0 170 28.8
Aa31LG8G8260 Aethionema arabicum HOM05D001259 ORTHO05D001103 4.1e-06 56.6 170 27.1
AT3G21600 Arabidopsis thaliana HOM05D001259 ORTHO05D001103 4.1e-06 56.6 170 27.1
Lalb_Chr24g0397321 Lupinus albus HOM05D001259 ORTHO05D001103 4.1e-06 56.6 263 25.1
Nitab4.5_0000566g0080 Nicotiana tabacum HOM05D001259 ORTHO05D001103 4.1e-06 56.6 231 26.8
CDE05G3309 Ceratophyllum demersum HOM05D001259 ORTHO05D001103 5.4e-06 56.2 170 27.6
COL.COLO4_34746 Corchorus olitorius HOM05D001259 ORTHO05D001103 5.4e-06 56.2 145 28.3
DCAR_010690 Daucus carota HOM05D001259 ORTHO05D001103 5.4e-06 56.2 171 29.2
VMungo0464G1422 Vigna mungo HOM05D001259 ORTHO05D001103 5.4e-06 56.2 235 23.4
Lsat_1_v5_gn_7_39781 Lactuca sativa HOM05D001259 ORTHO05D001103 7.1e-06 55.8 175 26.9
Lj4g0011285 Lotus japonicus HOM05D001259 ORTHO05D001103 7.1e-06 55.8 193 28.5
QL02p041645 Quercus lobata HOM05D001259 ORTHO05D001103 7.1e-06 55.8 175 27.4
QL02p041676 Quercus lobata HOM05D001259 ORTHO05D001103 7.1e-06 55.8 175 27.4
AL3G35720 Arabidopsis lyrata HOM05D001259 ORTHO05D001103 9.2e-06 55.5 174 26.4
BolC1t02691H Brassica oleracea HOM05D001259 ORTHO05D001103 9.2e-06 55.5 292 23.3
BraA01t02122Z Brassica rapa HOM05D001259 ORTHO05D001103 9.2e-06 55.5 184 23.9
Glyma.16G078200 Glycine max HOM05D001259 ORTHO05D001103 9.2e-06 55.5 238 23.5
SGA_v2.0_scaffold58G20383 Striga asiatica HOM05D001259 ORTHO05D001103 9.2e-06 55.5 130 29.2


User provided reference genes

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