Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.3e-163 579.7 294 100.0
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 3.1e-122 442.2 291 73.5
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 4.1e-122 441.8 291 73.2
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.1e-119 433.7 291 72.2
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.1e-119 433.7 289 73.4
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 2.5e-119 432.6 289 72.3
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 4.2e-119 431.8 289 72.3
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 1.4e-117 426.8 291 70.8
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 3.0e-117 425.6 306 69.9
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 5.2e-117 424.9 291 70.8
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 1.5e-116 423.3 291 69.4
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 2.0e-116 422.9 291 70.1
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 2.6e-116 422.5 291 70.8
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 1.3e-115 420.2 288 68.8
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 1.4e-114 416.8 289 70.2
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 1.8e-114 416.4 289 70.6
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 2.4e-114 416.0 291 68.4
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 3.1e-114 415.6 291 70.1
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 4.1e-114 415.2 290 69.3
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 7.0e-114 414.5 292 69.5
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 7.0e-114 414.5 291 69.8
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 9.1e-114 414.1 291 70.1
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.2e-113 413.7 291 69.8
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.6e-113 413.3 289 70.2
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 3.5e-113 412.1 290 67.9
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 1.7e-112 409.8 291 69.1
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 2.2e-112 409.5 295 67.8
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.9e-112 409.1 292 66.4
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 3.8e-112 408.7 290 70.3
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 3.8e-112 408.7 291 67.7
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.5e-111 406.8 307 65.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 2.5e-111 406.0 290 66.9
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 7.2e-111 404.4 291 68.0
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 9.4e-111 404.1 291 68.0
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 3.6e-110 402.1 288 68.1
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 4.7e-110 401.7 288 67.7
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.0e-109 400.6 291 67.0
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 1.4e-109 400.2 290 67.9
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 2.3e-109 399.4 290 66.6
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 5.2e-109 398.3 290 68.3
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 1.2e-108 397.1 289 65.7
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.5e-108 396.7 290 67.9
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 2.2e-107 392.9 287 65.2
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 4.9e-107 391.7 298 65.4
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.8e-106 389.8 318 63.2
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 9.2e-106 387.5 289 66.8
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 2.0e-105 386.3 289 64.4
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.0e-104 384.0 290 65.2
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 1.0e-104 384.0 289 65.1
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 2.3e-104 382.9 290 64.8
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 2.3e-104 382.9 287 63.1
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 3.8e-104 382.1 294 66.0
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 8.6e-104 380.9 290 64.1
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 8.6e-104 380.9 290 64.1
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 1.5e-103 380.2 293 63.8
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 1.2e-102 377.1 291 65.3
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 2.1e-102 376.3 290 63.4
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 4.7e-102 375.2 287 64.8
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 1.0e-101 374.0 306 61.8
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 1.4e-101 373.6 295 62.7
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 1.8e-101 373.2 288 62.2
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 3.0e-101 372.5 292 63.0
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 6.8e-101 371.3 274 67.2
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 3.4e-100 369.0 293 62.1
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 3.4e-100 369.0 290 63.1
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 1.7e-99 366.7 269 68.0
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 6.4e-99 364.8 295 61.4
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 7.0e-98 361.3 358 54.2
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 2.7e-97 359.4 292 59.2
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 5.0e-96 355.1 289 59.5
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 2.5e-95 352.8 328 55.8
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 4.3e-95 352.1 254 66.9
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 2.1e-94 349.7 261 65.1
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 8.0e-94 347.8 281 60.9
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 3.1e-93 345.9 238 69.3
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 2.2e-91 339.7 296 58.4
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 3.7e-91 339.0 288 58.0
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 4.1e-90 335.5 268 63.1
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 1.2e-89 334.0 229 71.2
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 1.9e-87 326.6 289 58.1
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 2.8e-86 322.8 279 58.8
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.4e-85 320.5 309 55.3
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 7.5e-84 314.7 227 71.4
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 1.3e-83 313.9 239 65.7
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 1.3e-80 303.9 198 73.2
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.7e-80 303.5 226 66.8
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 5.1e-80 302.0 209 70.8
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 6.6e-80 301.6 200 69.0
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 4.0e-77 292.4 253 57.7
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 4.0e-77 292.4 198 69.7
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 2.4e-74 283.1 304 47.4
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 5.4e-74 282.0 288 48.6
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 7.1e-74 281.6 173 76.3
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 3.3e-71 272.7 291 51.9
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 7.3e-71 271.6 293 47.4
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 5.2e-69 265.4 294 45.9
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 8.9e-69 264.6 184 71.2
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 6.4e-67 258.5 282 51.4
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 4.6e-65 252.3 198 62.1
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 1.8e-61 240.4 204 57.4
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 6.7e-56 221.9 185 61.1
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 4.3e-55 219.2 200 54.5
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 4.3e-55 219.2 186 60.2
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.5e-52 210.7 170 61.8
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 5.1e-48 195.7 220 44.5
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 8.7e-40 168.3 124 63.7
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 1.5e-39 167.5 135 63.0
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 1.9e-39 167.2 326 33.1
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.2e-33 147.9 92 76.1
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.1e-31 141.4 95 69.5
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 4.3e-31 139.4 92 70.7
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 1.1e-29 134.8 93 74.2
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 6.9e-29 132.1 92 66.3
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 1.2e-28 131.3 146 50.7
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 1.2e-28 131.3 120 52.5
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 2.5e-26 123.6 125 52.0
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.1e-25 120.6 107 54.2
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 8.8e-24 115.2 78 66.7
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 8.8e-24 115.2 87 62.1
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.6e-23 113.6 171 36.3
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 2.8e-22 110.2 76 68.4
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.7e-19 100.9 214 33.2
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 2.2e-19 100.5 67 73.1
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 3.8e-19 99.8 96 51.0
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-18 98.2 64 70.3
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 7.2e-18 95.5 98 51.0
AUR62040161 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.6e-17 93.2 90 53.3
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 5.7e-15 85.9 72 59.7
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 4.1e-13 79.7 52 65.4
Cc09_g05710 Coffea canephora HOM05D006242 ORTHO05D007936 5.9e-12 75.9 59 61.0
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 2.5e-10 70.5 110 37.3
Hund15669 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-10 70.5 66 57.6


User provided reference genes

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