Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 2.6e-59 231.9 117 100.0
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.1e-20 103.6 118 51.7
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.1e-20 102.1 122 51.6
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.5e-19 99.8 110 58.2
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.5e-19 99.8 110 58.2
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.5e-19 99.8 111 54.1
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 1.7e-18 96.3 113 54.9
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.1e-16 89.4 102 52.9
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.1e-16 89.4 115 52.2
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.0e-15 87.0 118 49.2
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.7e-15 86.3 122 45.9
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.3e-15 85.9 94 53.2
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 3.0e-15 85.5 121 46.3
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 5.1e-15 84.7 93 53.8
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 6.6e-15 84.3 92 53.3
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 8.6e-15 84.0 117 46.2
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.1e-14 83.6 112 52.7
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.5e-14 83.2 96 52.1
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 1.5e-14 83.2 111 49.5
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 1.9e-14 82.8 108 50.0
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 1.9e-14 82.8 112 48.2
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.9e-14 82.8 112 48.2
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.9e-14 82.8 133 45.9
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 2.5e-14 82.4 89 53.9
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 3.3e-14 82.0 98 51.0
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.3e-14 82.0 89 52.8
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 7.3e-14 80.9 107 53.3
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 9.5e-14 80.5 118 46.6
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 9.5e-14 80.5 81 51.9
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.2e-13 80.1 119 44.5
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.2e-13 80.1 112 45.5
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.6e-13 79.7 112 47.3
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 1.6e-13 79.7 93 51.6
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 2.1e-13 79.3 119 47.1
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 2.8e-13 79.0 109 45.9
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 4.7e-13 78.2 104 47.1
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 6.2e-13 77.8 105 45.7
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.1e-12 77.0 116 46.6
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.4e-12 76.6 112 46.4
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 1.4e-12 76.6 125 47.2
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 1.8e-12 76.3 97 47.4
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.8e-12 76.3 96 47.9
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.3e-12 75.9 112 46.4
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 4.0e-12 75.1 89 51.7
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 5.2e-12 74.7 105 42.9
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 5.2e-12 74.7 110 42.7
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 5.2e-12 74.7 95 49.5
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.2e-12 74.7 99 47.5
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 6.8e-12 74.3 112 49.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 6.8e-12 74.3 120 46.7
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 1.2e-11 73.6 99 48.5
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 3.4e-11 72.0 111 42.3
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.4e-11 71.6 116 39.7
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.4e-11 71.6 116 39.7
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 4.4e-11 71.6 119 43.7
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 1.3e-10 70.1 100 45.0
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 1.3e-10 70.1 100 49.0
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.7e-10 69.7 108 45.4
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 1.7e-10 69.7 123 42.3
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 2.9e-10 68.9 120 37.5
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 2.9e-10 68.9 104 39.4
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 4.9e-10 68.2 108 42.6
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 6.4e-10 67.8 97 46.4
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.1e-09 67.0 108 42.6
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.4e-09 66.6 95 44.2
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 1.4e-09 66.6 103 46.6
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 1.9e-09 66.2 112 41.1
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 2.4e-09 65.9 98 49.0
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 2.4e-09 65.9 124 37.9
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 2.4e-09 65.9 102 42.2
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 3.2e-09 65.5 98 43.9
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 4.1e-09 65.1 110 43.6
Sp7g24900 Schrenkiella parvula HOM05D009587 ORTHO05D004912 5.4e-09 64.7 107 42.1
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 1.2e-08 63.5 100 48.0
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 1.2e-08 63.5 98 42.9
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.2e-08 63.5 97 44.3
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 1.6e-08 63.2 104 44.2
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 2.1e-08 62.8 107 43.0
AL7G25880 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 2.1e-08 62.8 95 43.2
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 2.1e-08 62.8 102 41.2
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 2.1e-08 62.8 84 53.6
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 2.1e-08 62.8 87 44.8
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 2.7e-08 62.4 99 35.4
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 2.7e-08 62.4 96 45.8
CARHR268310 Cardamine hirsuta HOM05D009587 ORTHO05D004912 3.5e-08 62.0 98 45.9
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.5e-08 62.0 108 41.7
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 4.6e-08 61.6 93 47.3
Potri.006G052300 Populus trichocarpa HOM05D007398 ORTHO05D004912 4.6e-08 61.6 114 42.1
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 4.6e-08 61.6 89 49.4
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 6.0e-08 61.2 94 43.6
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 7.8e-08 60.8 90 47.8
AUR62015784 Chenopodium quinoa HOM05D007398 ORTHO05D004912 7.8e-08 60.8 103 41.7
AT4G26960 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 1.0e-07 60.5 107 40.2
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.0e-07 60.5 98 40.8
BcaB03g12516 Brassica carinata HOM05D009587 ORTHO05D004912 1.3e-07 60.1 91 42.9
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 1.3e-07 60.1 90 47.8
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 2.3e-07 59.3 103 45.6
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 2.3e-07 59.3 101 40.6
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 3.0e-07 58.9 93 44.1
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 3.9e-07 58.5 128 39.1
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 5.1e-07 58.2 90 46.7
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.1e-07 58.2 84 52.4
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 5.1e-07 58.2 78 46.2
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 6.6e-07 57.8 84 52.4
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 6.6e-07 57.8 84 52.4
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 6.6e-07 57.8 93 43.0
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 8.6e-07 57.4 98 39.8
AUR62020433 Chenopodium quinoa HOM05D007398 ORTHO05D004912 8.6e-07 57.4 103 39.8
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 8.6e-07 57.4 109 36.7
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 8.6e-07 57.4 93 43.0
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 1.5e-06 56.6 103 43.7
BcaC07g38259 Brassica carinata HOM05D009587 ORTHO05D004912 2.5e-06 55.8 103 38.8
C08p10050 Brassica napus HOM05D009587 ORTHO05D004912 3.3e-06 55.5 103 38.8
BolC8t48684H Brassica oleracea HOM05D009587 ORTHO05D004912 3.3e-06 55.5 103 38.8
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 3.3e-06 55.5 107 37.4
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 4.3e-06 55.1 99 40.4
BcaB01g04338 Brassica carinata HOM05D009587 ORTHO05D004912 5.6e-06 54.7 84 45.2
Lj3g0008615 Lotus japonicus HOM05D007398 ORTHO05D004912 9.5e-06 53.9 89 39.3


User provided reference genes

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