Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.3e-102 375.6 186 100.0
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 2.6e-42 176.0 97 85.6
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 6.5e-41 171.4 94 84.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 8.5e-41 171.0 102 80.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.9e-40 169.9 100 81.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 2.5e-40 169.5 100 81.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 2.5e-40 169.5 95 82.1
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 3.2e-40 169.1 102 79.4
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 4.2e-40 168.7 108 78.7
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.2e-39 167.2 94 81.9
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 2.1e-39 166.4 95 81.1
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.7e-39 166.0 97 78.4
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.6e-39 165.6 105 73.3
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 3.6e-39 165.6 95 80.0
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 3.6e-39 165.6 93 84.9
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 6.1e-39 164.9 96 81.2
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 8.0e-39 164.5 103 74.8
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.0e-38 164.1 105 76.2
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.0e-38 164.1 95 78.9
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.4e-38 163.7 97 79.4
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.4e-38 163.7 97 77.3
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.4e-38 163.7 109 74.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.8e-38 163.3 100 77.0
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.3e-38 162.9 105 73.3
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 3.0e-38 162.5 94 79.8
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 3.0e-38 162.5 97 79.4
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 4.0e-38 162.2 96 78.1
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 5.2e-38 161.8 96 78.1
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.2e-38 161.8 94 78.7
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 5.2e-38 161.8 94 78.7
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 6.7e-38 161.4 95 80.0
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 8.8e-38 161.0 96 79.2
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.5e-37 160.2 93 80.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.5e-37 160.2 97 78.4
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 81.1
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 80.0
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 80.0
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 80.0
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.0e-37 159.8 97 75.3
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 80.0
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 80.0
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.0e-37 159.8 97 75.3
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.0e-37 159.8 95 77.9
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.0e-37 159.8 90 81.1
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 3.3e-37 159.1 90 81.1
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 4.4e-37 158.7 90 80.0
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.4e-37 158.7 106 73.6
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 4.4e-37 158.7 94 76.6
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 7.5e-37 157.9 88 83.0
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 9.7e-37 157.5 97 73.2
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 9.7e-37 157.5 106 72.6
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 9.7e-37 157.5 104 72.1
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.3e-36 157.1 78 94.9
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.7e-36 156.8 90 77.8
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.7e-36 156.8 105 74.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.7e-36 156.8 94 76.6
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.7e-36 156.8 112 70.5
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.2e-36 156.4 102 70.6
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.2e-36 156.4 90 77.8
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 2.2e-36 156.4 96 76.0
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.8e-36 156.0 90 77.8
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.8e-36 156.0 90 77.8
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.8e-36 156.0 90 77.8
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.8e-36 156.0 88 83.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 3.7e-36 155.6 93 80.6
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 4.8e-36 155.2 97 76.3
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 4.8e-36 155.2 91 82.4
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 4.8e-36 155.2 94 74.5
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 6.3e-36 154.8 103 70.9
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 6.3e-36 154.8 101 70.3
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 8.3e-36 154.5 89 80.9
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 8.3e-36 154.5 87 83.9
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.8e-35 153.3 97 75.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 3.1e-35 152.5 104 72.1
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.6e-34 150.2 103 69.9
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.6e-34 150.2 105 70.5
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.6e-34 150.2 101 67.3
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 2.7e-34 149.4 97 74.2
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 2.7e-34 149.4 108 71.3
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 4.5e-34 148.7 88 76.1
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.5e-34 148.7 116 63.8
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 7.7e-34 147.9 94 72.3
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.0e-33 147.5 76 89.5
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.0e-33 147.5 96 72.9
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 2.9e-33 146.0 106 65.1
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 2.9e-33 146.0 93 69.9
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 5.0e-33 145.2 106 65.1
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 2.5e-32 142.9 93 72.0
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 4.2e-32 142.1 94 68.1
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 6.1e-31 138.3 77 83.1
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.3e-30 136.3 96 66.7
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.3e-30 136.3 93 66.7
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 5.2e-30 135.2 76 80.3
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 8.8e-30 134.4 78 79.5
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.6e-29 132.9 92 71.7
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 9.8e-29 131.0 78 79.5
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 5.4e-27 125.2 90 68.9
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 5.4e-27 125.2 86 72.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 9.1e-27 124.4 76 77.6
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.0e-25 120.9 104 54.8
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 5.0e-25 118.6 116 54.3
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.8e-23 112.8 107 52.3
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 2.0e-21 106.7 87 60.9
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 3.9e-17 92.4 76 53.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 5.0e-17 92.0 55 78.2
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.4e-14 84.0 110 42.7
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 2.2e-12 76.6 91 48.4


User provided reference genes

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