Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 1.3e-249 865.9 433 100.0
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.2e-141 507.3 483 57.1
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 2.9e-140 502.7 331 75.2
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 1.2e-138 497.3 482 57.3
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 6.2e-135 485.0 331 71.6
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 1.5e-133 480.3 335 70.4
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 2.0e-133 479.9 329 70.8
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 1.3e-132 477.2 331 69.5
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 3.2e-131 472.6 328 70.4
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 1.7e-129 466.8 330 67.6
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 6.6e-129 464.9 329 67.8
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 8.7e-129 464.5 472 53.0
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 1.9e-128 463.4 480 53.3
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 1.1e-126 457.6 333 66.7
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.5e-125 452.2 328 66.8
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.3e-124 450.7 466 52.1
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 2.9e-124 449.5 473 52.0
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.1e-123 447.6 342 64.6
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 1.1e-123 447.6 332 65.4
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 7.1e-123 444.9 329 65.0
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.2e-122 444.1 328 66.2
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 2.7e-122 443.0 472 51.7
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 1.0e-121 441.0 490 50.4
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 1.3e-121 440.7 463 51.6
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 2.8e-119 433.0 333 63.7
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 3.7e-119 432.6 333 64.3
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 2.6e-117 426.4 329 62.0
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 2.9e-116 422.9 329 61.4
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 3.8e-116 422.5 329 61.4
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 3.8e-116 422.5 329 62.6
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 4.9e-116 422.2 374 56.7
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 8.4e-116 421.4 438 54.1
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.6e-114 417.2 329 60.8
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.6e-114 417.2 325 64.0
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 2.7e-114 416.4 329 60.8
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 6.0e-114 415.2 328 61.3
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 5.1e-113 412.1 330 62.7
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 1.5e-112 410.6 338 60.7
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.3e-111 407.5 332 60.8
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 3.7e-111 406.0 324 63.0
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 8.2e-111 404.8 328 62.8
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 6.9e-110 401.7 302 65.2
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 1.2e-109 401.0 331 60.4
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.5e-109 400.6 334 59.0
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 2.0e-109 400.2 332 58.1
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 3.4e-109 399.4 331 61.0
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 1.0e-108 397.9 332 58.4
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 1.3e-108 397.5 328 61.6
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 1.7e-108 397.1 341 58.9
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 2.9e-108 396.4 332 58.4
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 6.5e-108 395.2 332 58.4
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 6.5e-108 395.2 421 51.3
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 1.4e-107 394.0 328 61.6
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 1.9e-107 393.7 332 59.3
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 2.5e-107 393.3 333 57.7
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 2.5e-107 393.3 332 57.8
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 2.5e-107 393.3 330 57.9
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 3.2e-107 392.9 329 57.8
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 9.3e-107 391.3 332 57.5
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 1.6e-106 390.6 332 57.5
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 2.7e-106 389.8 332 57.5
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 3.5e-106 389.4 329 57.1
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 3.0e-105 386.3 320 61.9
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 3.0e-105 386.3 332 57.2
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 3.0e-105 386.3 477 46.5
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 3.9e-105 386.0 339 59.6
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 3.9e-105 386.0 330 58.5
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 6.7e-105 385.2 307 62.2
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 1.1e-104 384.4 493 46.0
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 5.3e-102 375.6 329 56.2
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 6.9e-102 375.2 329 57.4
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.2e-101 374.4 310 61.0
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.5e-101 372.5 471 48.4
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 2.2e-100 370.2 355 52.4
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 2.9e-100 369.8 327 56.0
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 8.5e-100 368.2 332 56.3
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 8.5e-100 368.2 329 55.3
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 1.9e-99 367.1 332 55.4
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 4.6e-98 362.5 332 54.5
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 6.1e-98 362.1 332 54.5
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 6.1e-98 362.1 332 53.9
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 5.1e-97 359.0 330 54.5
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 3.7e-95 352.8 329 55.3
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 2.4e-94 350.1 334 55.4
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 1.5e-93 347.4 332 53.3
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.5e-88 330.9 335 51.0
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 9.7e-88 328.2 328 51.5
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 1.8e-86 323.9 332 48.5
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 2.9e-84 316.6 278 57.9
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 8.5e-84 315.1 278 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 9.4e-83 311.6 328 47.6
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.6e-82 309.7 325 48.6
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 4.4e-80 302.8 332 46.1
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 9.1e-78 295.0 338 44.4
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 1.0e-76 291.6 322 49.7
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 1.2e-72 278.1 201 62.7
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.3e-71 274.6 467 37.3
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 2.3e-65 253.8 319 44.2
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 5.4e-62 242.7 235 53.2
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 1.3e-60 238.0 161 68.3
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 2.7e-53 213.8 320 41.6
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.5e-51 208.0 439 34.4
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.1e-50 204.1 278 42.1
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 7.8e-45 185.7 168 53.6
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.2e-38 163.7 239 41.4
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.6e-37 161.4 261 37.9
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.8e-37 159.1 284 34.9
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 5.1e-36 156.4 133 57.1
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-32 144.8 212 40.1
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.4e-32 143.7 187 41.2
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 2.9e-31 140.6 105 62.9
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 9.2e-30 135.6 274 39.4
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 9.2e-30 135.6 266 33.5
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.1e-28 129.8 228 38.2
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 8.6e-28 129.0 129 51.9
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.3e-27 125.9 130 52.3
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.1e-26 122.5 157 45.2
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-25 122.1 213 34.7
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.1e-22 109.4 246 32.9
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.7e-20 104.8 133 42.9
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 4.0e-17 93.6 110 44.5
MBI18_g07590_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D015058 9.0e-17 92.4 50 84.0
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 1.5e-16 91.7 95 52.6
Cre02.g118450 Chlamydomonas reinhardtii HOM05D004701 ORTHO05D005220 4.4e-16 90.1 264 28.4
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 7.6e-16 89.4 76 56.6
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.9e-15 87.4 174 32.2
PRCOL_00003726 Prasinoderma coloniale HOM05D004701 ORTHO05D005220 6.4e-15 86.3 255 27.5
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 1.4e-14 85.1 52 69.2
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 3.5e-13 80.5 58 65.5
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-11 75.1 89 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis HOM05D004701 ORTHO05D005220 7.3e-11 72.8 210 29.0
Haze_06050 Corylus avellana HOM05D022078 ORTHO05D024871 9.6e-11 72.4 58 62.1
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 8.1e-10 69.3 209 32.5
MBI05_g10671_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 1.4e-09 68.6 34 91.2
MELO3C028766.2 Cucumis melo HOM05D001162 ORTHO05D022475 9.0e-09 65.9 43 60.5
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 1.2e-08 65.5 83 37.3
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.6e-08 62.8 155 31.0
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.1e-06 58.9 40 62.5
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 3.2e-06 57.4 84 38.1
CSS0033804 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 5.5e-06 56.6 38 63.2


User provided reference genes

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