Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 1.1e-191 673.3 374 100.0
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 8.6e-101 371.3 414 59.2
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 1.9e-100 370.2 428 59.8
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 3.1e-98 362.8 415 55.7
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 2.6e-97 359.8 307 64.5
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 1.3e-96 357.5 414 55.1
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 2.4e-95 353.2 407 58.2
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 7.1e-95 351.7 408 59.6
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 1.2e-94 350.9 415 56.4
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 1.0e-93 347.8 412 55.1
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 1.1e-92 344.4 396 58.8
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 4.3e-92 342.4 406 56.9
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 4.3e-92 342.4 408 57.6
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 9.6e-92 341.3 417 54.0
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 2.1e-91 340.1 415 56.6
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 6.2e-91 338.6 419 55.4
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 4.0e-90 335.9 419 54.9
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 1.5e-89 334.0 418 53.3
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 5.8e-89 332.0 419 55.8
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 9.9e-89 331.3 419 56.1
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 6.4e-88 328.6 419 55.6
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 8.4e-88 328.2 410 54.4
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.4e-87 326.6 419 55.6
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 2.4e-87 326.6 398 56.5
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 3.2e-87 326.2 416 54.1
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 9.3e-87 324.7 416 54.1
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 1.6e-86 323.9 367 58.9
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 2.7e-86 323.2 404 56.7
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 3.5e-86 322.8 435 49.7
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 4.6e-86 322.4 422 53.1
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 6.0e-86 322.0 415 52.5
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 7.8e-86 321.6 384 52.9
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 3.0e-85 319.7 409 52.6
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 8.7e-85 318.2 414 55.6
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 8.7e-85 318.2 447 50.3
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 1.9e-84 317.0 358 55.3
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 3.3e-84 316.2 449 49.4
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 5.6e-84 315.5 270 67.0
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 1.6e-83 313.9 377 58.4
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 2.1e-83 313.5 412 53.4
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 2.1e-83 313.5 387 56.1
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 3.6e-83 312.8 412 52.9
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 4.8e-83 312.4 378 52.4
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 4.0e-82 309.3 264 64.8
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 4.0e-82 309.3 388 51.5
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 1.5e-81 307.4 415 53.3
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 1.5e-81 307.4 330 57.3
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 2.0e-81 307.0 351 59.8
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 3.4e-81 306.2 415 52.8
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 6.4e-80 302.0 394 54.1
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 8.4e-80 301.6 420 51.0
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 5.4e-79 298.9 323 55.7
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 2.1e-78 297.0 383 54.3
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 2.7e-78 296.6 420 51.7
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 3.5e-78 296.2 419 50.6
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 6.0e-78 295.4 336 56.2
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 1.3e-77 294.3 373 48.5
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 3.0e-77 293.1 427 51.1
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 3.0e-77 293.1 304 56.2
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 6.7e-77 292.0 326 59.2
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 1.9e-76 290.4 389 54.2
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 5.6e-76 288.9 359 49.9
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 1.3e-75 287.7 513 46.4
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 1.6e-75 287.3 377 49.9
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 4.0e-74 282.7 398 52.0
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 5.3e-74 282.3 373 53.4
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 1.2e-73 281.2 366 55.5
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 2.0e-73 280.4 383 54.0
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 7.6e-73 278.5 254 63.4
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 1.3e-72 277.7 253 63.2
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 1.3e-72 277.7 395 51.6
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 1.7e-72 277.3 379 52.5
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 4.9e-72 275.8 327 52.0
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 2.5e-71 273.5 395 53.9
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 3.2e-71 273.1 377 53.3
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 3.2e-71 273.1 364 53.3
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 2.3e-69 266.9 356 53.7
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 2.3e-69 266.9 413 46.0
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 3.9e-69 266.2 405 48.4
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 1.6e-67 260.8 359 49.0
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 1.6e-67 260.8 319 56.7
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 2.8e-67 260.0 379 50.9
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 2.8e-67 260.0 406 44.8
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 1.1e-66 258.1 384 52.1
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 5.3e-66 255.8 261 54.8
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 6.9e-66 255.4 387 45.7
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 1.3e-64 251.1 399 47.9
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.8e-64 249.6 405 49.4
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 6.5e-64 248.8 405 47.9
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.4e-63 247.7 333 48.9
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 3.2e-63 246.5 326 49.7
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 7.1e-63 245.4 396 49.5
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 3.0e-61 240.0 377 47.5
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 6.7e-61 238.8 229 59.8
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 8.7e-61 238.4 399 47.6
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 2.5e-60 236.9 376 46.5
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 9.7e-60 235.0 379 47.0
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.2e-59 233.8 404 47.5
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 2.4e-58 230.3 404 48.0
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 9.0e-58 228.4 308 45.5
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 1.3e-56 224.6 376 44.4
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 2.2e-56 223.8 232 57.3
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.4e-55 221.1 227 55.1
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 4.2e-55 219.5 329 44.4
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 7.2e-55 218.8 329 44.4
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 2.7e-54 216.9 398 44.0
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 5.7e-52 209.1 235 55.3
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 3.1e-50 203.4 377 46.4
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 6.9e-50 202.2 375 47.7
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 5.9e-49 199.1 377 45.4
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 5.9e-49 199.1 325 43.4
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 1.0e-48 198.4 350 44.0
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 6.5e-48 195.7 262 50.8
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 1.4e-47 194.5 375 45.3
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 2.2e-43 180.6 285 42.1
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.4e-42 177.9 331 40.8
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 5.3e-42 176.0 337 42.1
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.0e-41 174.1 383 41.8
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 2.6e-41 173.7 266 44.0
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 2.3e-37 160.6 263 41.8
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.7e-25 120.6 359 38.4
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 7.2e-23 112.5 138 50.7
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 2.7e-22 110.5 143 49.0
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 7.0e-18 95.9 85 60.0
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.2e-17 95.1 206 39.8
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 1.3e-16 91.7 141 45.4
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 1.2e-14 85.1 214 30.4
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 3.6e-14 83.6 83 63.9
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.4e-13 81.6 90 53.3
CDE10G1193 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 1.5e-12 78.2 83 57.8
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 1.3e-11 75.1 103 44.7
CDE10G0753 Ceratophyllum demersum HOM05D000867 ORTHO05D000864 2.4e-10 70.9 74 54.1
FAN17G2803 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.2e-10 70.5 139 38.1
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 4.1e-10 70.1 99 41.4
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 5.4e-10 69.7 135 42.2
Dinv07233 Davidia involucrata HOM05D004981 ORTHO05D005635 6.6e-08 62.8 68 48.5
Cre04.g221350 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 1.2e-06 58.5 170 31.8
BcaC05g24776 Brassica carinata HOM05D004981 ORTHO05D005635 4.7e-06 56.6 45 55.6
BolC7t41892H Brassica oleracea HOM05D004981 ORTHO05D042093 8.0e-06 55.8 145 36.6


User provided reference genes

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