Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 8.5e-239 830.1 466 100.0
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 2.8e-56 223.8 464 47.2
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 9.2e-52 208.8 472 36.7
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 2.7e-43 180.6 478 34.5
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 2.3e-42 177.6 398 38.2
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 8.7e-42 175.6 443 36.3
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 4.0e-39 166.8 457 33.3
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.1e-36 158.7 456 38.2
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.2e-36 157.1 443 33.0
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.2e-36 157.1 451 32.2
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 5.4e-36 156.4 424 34.2
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 5.4e-36 156.4 459 32.2
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 1.6e-35 154.8 430 34.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 2.1e-35 154.5 432 31.7
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.3e-34 151.0 472 32.4
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 3.0e-34 150.6 462 33.1
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.5e-33 148.3 435 32.9
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 4.3e-33 146.7 520 36.3
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 7.4e-33 146.0 434 34.1
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.3e-32 145.2 422 33.2
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.1e-32 144.4 467 33.4
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.8e-32 144.1 480 31.2
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 4.8e-32 143.3 467 33.2
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 2.4e-31 141.0 469 31.3
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 4.0e-31 140.2 429 31.5
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 6.9e-31 139.4 436 33.9
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 5.8e-30 136.3 455 31.4
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 1.7e-29 134.8 453 33.1
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 2.2e-29 134.4 422 32.7
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 2.9e-29 134.0 433 31.4
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 3.8e-29 133.7 494 29.8
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 4.9e-29 133.3 385 31.9
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 2.4e-28 131.0 485 32.2
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.4e-28 131.0 447 31.1
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 5.5e-28 129.8 170 44.7
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.7e-27 127.5 300 35.3
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.6e-27 126.7 449 30.7
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 1.8e-26 124.8 315 35.6
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.3e-26 124.4 448 30.4
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.7e-26 122.9 449 30.1
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.5e-25 121.7 445 29.7
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 4.3e-25 120.2 447 30.2
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 3.1e-23 114.0 477 29.6
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 6.9e-23 112.8 425 31.5
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.0e-21 109.0 353 31.4
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.7e-21 108.2 314 31.5
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.1e-20 105.5 473 28.8
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 2.5e-20 104.4 280 33.2
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 1.6e-19 101.7 301 31.2
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.1e-19 101.3 394 29.4
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.7e-19 100.9 385 29.9
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 3.9e-18 97.1 375 29.6
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 8.7e-18 95.9 471 27.2
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.6e-16 91.7 317 33.1
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.1e-16 91.3 415 27.5
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 2.8e-16 90.9 333 30.6
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 4.8e-16 90.1 422 31.0
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 8.2e-16 89.4 296 30.1
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 5.3e-15 86.7 308 30.5
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 2.0e-14 84.7 474 27.0
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 2.0e-14 84.7 101 46.5
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 7.6e-14 82.8 96 46.9
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 6.5e-13 79.7 186 34.9
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 8.5e-13 79.3 181 34.8
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.9e-12 78.2 164 33.5
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 9.3e-12 75.9 437 30.0
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 3.6e-11 73.9 98 42.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.8e-10 71.6 441 27.4
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 2.3e-10 71.2 444 27.3
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 5.1e-10 70.1 398 24.9
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 6.7e-10 69.7 86 41.9
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 8.7e-10 69.3 379 26.4
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 3.3e-09 67.4 354 30.8
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 9.7e-09 65.9 461 23.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 2.2e-08 64.7 463 26.3
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 2.4e-07 61.2 205 29.8
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 2.4e-07 61.2 205 29.8
CDE05G0459 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.5e-06 58.5 449 22.7
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 4.5e-06 57.0 50 48.0


User provided reference genes

Program Settings